BP920543
Clone id YMU001_000138_D06
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCAAGAGAGGCTTCTCTGGGGGGAGGGACACTTGCAGCAGCCTAGAATGACACTCTTCA
CATGTTTGAAATTCAATGCAGAACCCTCGGTGAGAAGCACAAGGACCAAGCGCACTTCTT
AGGCATTCCAAAAAGGAACAGAATCTTCTCTACACCTCCTGAGCAATTGACTTTGTGGAT
ACACAATCGAGCTACTTGGCTCTTTTCCATTTTGCTACCGTTAAGAGAAGCTCAAAAAGA
CAAAATCTTCTGAATCCATAAATTCATTTATCATCAGAATCTCTTGTTTCCCAACAGTGT
GTAAGCATCCCCATAGCCGCAGGAAAGTCACAAGCTTATTAGGCAGCTTCACACCCTCTT
TTCCTATGAATAACAAAGAAGCCATTTCAAATCTTGAAATTTATGGCAATAGCATTGTTC
AAGTAATGCCCCAAACATTATGAGAATGATTGACAACTGAATATGCACAGGCAATATAAG
GTGAAAGCACTGATGATGTACCTGAAACATAATGGCAGCTGCTGCTTTCTCTGGGTAAAC
TGA
■■Homology search results ■■ -
sp_hit_id Q924C6
Definition sp|Q924C6|LOXL4_MOUSE Lysyl oxidase homolog 4 OS=Mus musculus
Align length 28
Score (bit) 30.0
E-value 7.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920543|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_D06.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q924C6|LOXL4_MOUSE Lysyl oxidase homolog 4 OS=Mus musculus GN... 30 7.6

>sp|Q924C6|LOXL4_MOUSE Lysyl oxidase homolog 4 OS=Mus musculus
GN=Loxl4 PE=2 SV=1
Length = 757

Score = 30.0 bits (66), Expect = 7.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1

Query: 228 SLNGSKMEKSQVARLCIHKVNCSGGVEK 145
+LNGSK+ + A C+ NC GV++
Sbjct: 628 TLNGSKVAEGHKASFCLEDTNCPSGVQR 655


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920543|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_D06.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******