BP920549
Clone id YMU001_000138_D12
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACACCACCAAATTTCTACGTCGAACTTTGTGCTTTGTTTCCTCAGTAATGTGACTCACTG
CTCCCTGTTCACTTACACTTCCCCGTACATCCGGTGGCATCTCCCAGCTGAAATGGAATA
TAACTATTGAAATGGAGTTGTACATCTAGAACAGCCCCAAGAATATGTGATCCCAAGCAG
ATACCTAGCGTAAGACACCTCCAAAACATTATTTTCACACTCATGCTTGATGTCAGACAA
AACCATACGATGGAACCTAATATCAATAAGCAAGCACACATCCGTGTATGACTTTATACA
ATTCTATCTCACCCCAAACTCAGAAAGAGGGCCTTGCACTCATCACATCCTTGGACTCA
■■Homology search results ■■ -
sp_hit_id Q9MUJ3
Definition sp|Q9MUJ3|PSAA_ADICA Photosystem I P700 chlorophyll a apoprotein A1 OS=Adiantum capillus-veneris
Align length 47
Score (bit) 86.3
E-value 4.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920549|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_D12.
(359 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9MUJ3|PSAA_ADICA Photosystem I P700 chlorophyll a apoprotein... 86 4e-17
sp|Q9MUJ5|PSAA_ANGEV Photosystem I P700 chlorophyll a apoprotein... 84 3e-16
sp|Q9MUJ6|PSAA_EQUPA Photosystem I P700 chlorophyll a apoprotein... 83 5e-16
sp|Q9MUJ4|PSAA_ASPND Photosystem I P700 chlorophyll a apoprotein... 83 5e-16
sp|Q27S50|PSAA_SOLTU Photosystem I P700 chlorophyll a apoprotein... 82 6e-16
sp|Q2MIA0|PSAA_SOLLC Photosystem I P700 chlorophyll a apoprotein... 82 6e-16
sp|Q2MII7|PSAA_SOLBU Photosystem I P700 chlorophyll a apoprotein... 82 6e-16
sp|Q2QD89|PSAA_CUCSA Photosystem I P700 chlorophyll a apoprotein... 82 6e-16
sp|P06511|PSAA_SPIOL Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q06FW5|PSAA_PELHO Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q09X17|PSAA_MORIN Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|P06406|PSAA_MARPO Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q9MUK1|PSAA_MARBO Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q332X8|PSAA_LACSA Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q1KXV9|PSAA_HELAN Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q3V534|PSAA_ACOCL Photosystem I P700 chlorophyll a apoprotein... 82 8e-16
sp|Q2PMU3|PSAA_SOYBN Photosystem I P700 chlorophyll a apoprotein... 82 1e-15
sp|A4GG97|PSAA_PHAVU Photosystem I P700 chlorophyll a apoprotein... 82 1e-15
sp|P06405|PSAA_TOBAC Photosystem I P700 chlorophyll a apoprotein... 81 1e-15
sp|Q33C36|PSAA_NICTO Photosystem I P700 chlorophyll a apoprotein... 81 1e-15
sp|Q3C1H8|PSAA_NICSY Photosystem I P700 chlorophyll a apoprotein... 81 1e-15
sp|Q06RD1|PSAA_JASNU Photosystem I P700 chlorophyll a apoprotein... 81 1e-15
sp|Q8S8X4|PSAA_ATRBE Photosystem I P700 chlorophyll a apoprotein... 81 1e-15
sp|Q0ZJ20|PSAA_VITVI Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|Q9MUJ0|PSAA_TORCL Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|Q9MUK3|PSAA_SEQSE Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|Q9MUJ2|PSAA_PSINU Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|A4GYR0|PSAA_POPTR Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|Q09G46|PSAA_PLAOC Photosystem I P700 chlorophyll a apoprotein... 81 2e-15
sp|Q06GR0|PSAA_PIPCE Photosystem I P700 chlorophyll a apoprotein... 81 2e-15

>sp|Q9MUJ3|PSAA_ADICA Photosystem I P700 chlorophyll a apoprotein A1
OS=Adiantum capillus-veneris GN=psaA PE=2 SV=3
Length = 750

Score = 86.3 bits (212), Expect = 4e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVSEQGAVSHIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSEQGAVSHIT 630


>sp|Q9MUJ5|PSAA_ANGEV Photosystem I P700 chlorophyll a apoprotein A1
OS=Angiopteris evecta GN=psaA PE=3 SV=2
Length = 750

Score = 83.6 bits (205), Expect = 3e-16
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSISIVIFHFSW+M DV GS+S+QG VSHIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISIVIFHFSWKMQSDVWGSISDQGVVSHIT 630


>sp|Q9MUJ6|PSAA_EQUPA Photosystem I P700 chlorophyll a apoprotein A1
(Fragment) OS=Equisetum palustre GN=psaA PE=3 SV=1
Length = 719

Score = 82.8 bits (203), Expect = 5e-16
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS++EQG +SHIT
Sbjct: 574 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSINEQGVISHIT 620


>sp|Q9MUJ4|PSAA_ASPND Photosystem I P700 chlorophyll a apoprotein A1
(Fragment) OS=Asplenium nidus GN=psaA PE=3 SV=1
Length = 719

Score = 82.8 bits (203), Expect = 5e-16
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+SEQG ++HIT
Sbjct: 573 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISEQGVINHIT 619


>sp|Q27S50|PSAA_SOLTU Photosystem I P700 chlorophyll a apoprotein A1
OS=Solanum tuberosum GN=psaA PE=3 SV=1
Length = 750

Score = 82.4 bits (202), Expect = 6e-16
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVS+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGVVTHIT 630


>sp|Q2MIA0|PSAA_SOLLC Photosystem I P700 chlorophyll a apoprotein A1
OS=Solanum lycopersicum GN=psaA PE=3 SV=1
Length = 750

Score = 82.4 bits (202), Expect = 6e-16
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVS+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGVVTHIT 630


>sp|Q2MII7|PSAA_SOLBU Photosystem I P700 chlorophyll a apoprotein A1
OS=Solanum bulbocastanum GN=psaA PE=3 SV=1
Length = 750

Score = 82.4 bits (202), Expect = 6e-16
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVS+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGVVTHIT 630


>sp|Q2QD89|PSAA_CUCSA Photosystem I P700 chlorophyll a apoprotein A1
OS=Cucumis sativus GN=psaA PE=3 SV=1
Length = 750

Score = 82.4 bits (202), Expect = 6e-16
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVS+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGVVTHIT 630


>sp|P06511|PSAA_SPIOL Photosystem I P700 chlorophyll a apoprotein A1
OS=Spinacia oleracea GN=psaA PE=3 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 8e-16
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 630


>sp|Q06FW5|PSAA_PELHO Photosystem I P700 chlorophyll a apoprotein A1
OS=Pelargonium hortorum GN=psaA PE=3 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 8e-16
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYN+IS+VIFHFSW+M DV GS+SEQG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISEQGVVTHIT 630


tr_hit_id Q8M995
Definition tr|Q8M995|Q8M995_9FILI Photosystem I P700 chlorophyll A apoprotein (Fragment) OS=Ophioglossum petiolatum
Align length 47
Score (bit) 83.6
E-value 5.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920549|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_D12.
(359 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8M995|Q8M995_9FILI Photosystem I P700 chlorophyll A apoprote... 84 5e-15
tr|Q8MF88|Q8MF88_ACOCL Photosystem I P700 chlorophyll A apoprote... 82 1e-14
tr|Q4FFJ6|Q4FFJ6_ACOAM Photosystem I P700 chlorophyll A apoprote... 82 1e-14
tr|B7T2X9|B7T2X9_EROTE Photosystem I P700 apoprotein A1 OS=Erodi... 82 1e-14
tr|B2XWK5|B2XWK5_FAGEA Photosystem I P700 chlorophyll a apoprote... 82 1e-14
tr|B1NWF0|B1NWF0_MANES Photosystem I P700 chlorophyll A apoprote... 82 1e-14
tr|A1ILN0|A1ILN0_9BRAS Photosystem I P700 chlorophyll A apoprote... 82 1e-14
tr|A8W3C4|A8W3C4_CUSEX Photosystem I P700 chlorophyll A apoprote... 82 2e-14
tr|A7Y3D4|A7Y3D4_IPOPU Photosystem I P700 chlorophyll A apoprote... 82 2e-14
tr|Q8M928|Q8M928_9CONI Photosystem I P700 chlorophyll A apoprote... 81 2e-14
tr|B7T350|B7T350_9ROSI Photosystem I P700 apoprotein A1 OS=Geran... 81 2e-14
tr|B2XTK8|B2XTK8_HETA4 Photosystem I P700 chlorophyll A apoprote... 81 2e-14
tr|B2XT52|B2XT52_HETA2 Photosystem I P700 chlorophyll A apoprote... 81 2e-14
tr|A9L996|A9L996_LEMMI Photosystem I P700 chlorophyll A apoprote... 81 2e-14
tr|B4WIW1|B4WIW1_9SYNE Photosystem I core protein PsaA OS=Synech... 81 3e-14
tr|Q8S7T3|Q8S7T3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8S6F6|Q8S6F6_ORYSJ Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8S1Q4|Q8S1Q4_ORYSJ Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MFM8|Q8MFM8_ABIAL Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MC78|Q8MC78_ACEPM Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MC74|Q8MC74_9MAGN Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MA65|Q8MA65_CUPAR Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MA52|Q8MA52_CRYJA Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MA47|Q8MA47_9CONI Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MA40|Q8MA40_CALOC Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8MA26|Q8MA26_CHLSC Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8M9R8|Q8M9R8_9MAGN Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8M9Q6|Q8M9Q6_9ROSI Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8M9M3|Q8M9M3_ISOAR Photosystem I P700 chlorophyll A apoprote... 81 3e-14
tr|Q8M9H3|Q8M9H3_9CONI Photosystem I P700 chlorophyll A apoprote... 81 3e-14

>tr|Q8M995|Q8M995_9FILI Photosystem I P700 chlorophyll A apoprotein
(Fragment) OS=Ophioglossum petiolatum GN=psaA PE=2 SV=1
Length = 614

Score = 83.6 bits (205), Expect = 5e-15
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GSVS+QG VSHIT
Sbjct: 494 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGVVSHIT 540


>tr|Q8MF88|Q8MF88_ACOCL Photosystem I P700 chlorophyll A apoprotein
(Fragment) OS=Acorus calamus GN=psaA PE=2 SV=1
Length = 661

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 575 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 621


>tr|Q4FFJ6|Q4FFJ6_ACOAM Photosystem I P700 chlorophyll A apoprotein
(Fragment) OS=Acorus americanus GN=psaA PE=3 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 630


>tr|B7T2X9|B7T2X9_EROTE Photosystem I P700 apoprotein A1 OS=Erodium
texanum GN=psaA PE=4 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYN+IS+VIFHFSW+M DV GS+SEQG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISEQGVVTHIT 630


>tr|B2XWK5|B2XWK5_FAGEA Photosystem I P700 chlorophyll a apoprotein
A1 OS=Fagopyrum esculentum subsp. ancestrale GN=psaA
PE=4 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 630


>tr|B1NWF0|B1NWF0_MANES Photosystem I P700 chlorophyll A apoprotein
OS=Manihot esculenta GN=psaA PE=3 SV=1
Length = 750

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 630


>tr|A1ILN0|A1ILN0_9BRAS Photosystem I P700 chlorophyll A apoprotein
(Fragment) OS=Brassica oleracea var. capitata x Raphanus
sativus GN=psaA PE=3 SV=1
Length = 734

Score = 82.0 bits (201), Expect = 1e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 568 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHIT 614


>tr|A8W3C4|A8W3C4_CUSEX Photosystem I P700 chlorophyll A apoprotein
OS=Cuscuta exaltata GN=psaA PE=3 SV=1
Length = 748

Score = 81.6 bits (200), Expect = 2e-14
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG ++HIT
Sbjct: 582 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVINHIT 628


>tr|A7Y3D4|A7Y3D4_IPOPU Photosystem I P700 chlorophyll A apoprotein
OS=Ipomoea purpurea GN=psaA PE=3 SV=1
Length = 750

Score = 81.6 bits (200), Expect = 2e-14
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDH+FLGLF MYNSIS+VIFHFSW+M DV GS+S+QG ++HIT
Sbjct: 584 VSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVITHIT 630


>tr|Q8M928|Q8M928_9CONI Photosystem I P700 chlorophyll A apoprotein
(Fragment) OS=Phyllocladus trichomanoides GN=psaA PE=2
SV=1
Length = 722

Score = 81.3 bits (199), Expect = 2e-14
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = -2

Query: 184 VSAWDHIFLGLF*MYNSISIVIFHFSWEMPPDVRGSVSEQGAVSHIT 44
VSAWDHIFLGLF MYN+IS+VIFHFSW+M DV GS+S+QG V+HIT
Sbjct: 578 VSAWDHIFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHIT 624