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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920552
Clone id YMU001_000138_E03
Library
Length 471
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGAAAGAACAGTTGTGGTTTTATTGTCATACATACCCATCACAAGGACATTTTGTAA
CCTCTGTCATGCAGGTCTTTGTCCTATGCAGAAAAATGCAAGACATTTTGTAGTTACCAC
GTCCGCCCCTTGCTTGGTTCAGAGATACCACCCAACCATATCACCCTTCAACAGGGGACC
ATTGAGGAGTTTAGCAGTAAAGGCCAAACCTCTATTGTGGTCAACCACTTCCCCTATGCT
CGTAAACAACCCCACCTTGACACTGAGCATCCAAAATCATATGCACGCACTATGCAATGA
AGTAATGCTGTTATCTGCCAGGGAATTCACAAACTTTCTTTTAGAAGACCTTTCATGTCC
TCAGCAACTGAGTTGAAGCACTTTGACAAATTCCCAAAATGTTGATGTTCCAGATTGGCC
CTTCCATTTCTTCCAATGGCAATATCAGCATCGCTTAGCCTTTCATGGGGC
■■Homology search results ■■ -
sp_hit_id A5IHA2
Definition sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella pneumophila (strain Corby)
Align length 49
Score (bit) 31.2
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920552|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E03.
         (458 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella pneum...    31   2.3  
sp|Q5X7P8|ARLY_LEGPA Argininosuccinate lyase OS=Legionella pneum...    31   2.3  
sp|P22967|ACET_MOUSE Angiotensin-converting enzyme, testis-speci...    31   2.9  
sp|Q5WZ49|ARLY_LEGPL Argininosuccinate lyase OS=Legionella pneum...    30   5.0  
sp|Q5ZY77|ARLY_LEGPH Argininosuccinate lyase OS=Legionella pneum...    30   5.0  
sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4 O...    30   6.6  
sp|Q8KZA0|CARA_DESVM Carbamoyl-phosphate synthase small chain OS...    29   8.6  

>sp|A5IHA2|ARLY_LEGPC Argininosuccinate lyase OS=Legionella
           pneumophila (strain Corby) GN=argH PE=3 SV=1
          Length = 411

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
           I  H+  LC +++L S +EF   +L+D         S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVILDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q5X7P8|ARLY_LEGPA Argininosuccinate lyase OS=Legionella
           pneumophila (strain Paris) GN=argH PE=3 SV=1
          Length = 411

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
           I  H+  LC +++L S +EF   +L+D         S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVILDDAFATGS---SLMPNKKNPDVPE 292


>sp|P22967|ACET_MOUSE Angiotensin-converting enzyme, testis-specific
           isoform OS=Mus musculus GN=Ace PE=1 SV=1
          Length = 732

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +3

Query: 96  CSYHVRPLLGSEIPPNHITLQQGTIEEFSSKGQTSIVVNHFPYARKQPHLDTEHPKS--- 266
           C +H+  L+ S++  +H+T  QG   + +++ QT+          + P+L+T+  K+   
Sbjct: 20  CGHHL--LVLSQVATDHVTANQGITNQATTRSQTTTHQATIDQTTQIPNLETDEAKADRF 77

Query: 267 ---YARTMQ 284
              Y RT Q
Sbjct: 78  VEEYDRTAQ 86


>sp|Q5WZ49|ARLY_LEGPL Argininosuccinate lyase OS=Legionella
           pneumophila (strain Lens) GN=argH PE=3 SV=1
          Length = 411

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
           I  H+  LC +++L S +EF    L+D         S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVTLDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q5ZY77|ARLY_LEGPH Argininosuccinate lyase OS=Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1 /
           ATCC 33152 / DSM 7513) GN=argH PE=3 SV=2
          Length = 411

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 256 IQNHMHALCNEVMLLSAREFTNFLLEDLSCPQQLS*STLTNSQNVDVPD 402
           I  H+  LC +++L S +EF    L+D         S + N +N DVP+
Sbjct: 247 IMMHLSRLCEDLILWSTQEFNFVTLDDAFATGS---SLMPNKKNPDVPE 292


>sp|Q9HBW1|LRRC4_HUMAN Leucine-rich repeat-containing protein 4
           OS=Homo sapiens GN=LRRC4 PE=1 SV=2
          Length = 653

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
 Frame = +1

Query: 10  LLSYIPITRTFCNLCHAGLCPMQKNARHFV------VTTSAPCLVQRYHPTISPFNRGPL 171
           L  YIP   T C  CHA   PM    R+ V         SAP ++    P     + G +
Sbjct: 315 LREYIPTNSTCCGRCHA---PMHMRGRYLVEVDQASFQCSAPFIMDA--PRDLNISEGRM 369

Query: 172 RSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVMLLSAREFTNFLLED 336
             L  +  P+  S+   +L N   L+ + ++   ++ N+  L     F++ LL D
Sbjct: 370 AELKCRTPPM--SSVKWLLPNGTVLSHASRHPRISVLNDGTL----NFSHVLLSD 418


>sp|Q8KZA0|CARA_DESVM Carbamoyl-phosphate synthase small chain
           OS=Desulfovibrio vulgaris (strain Miyazaki) GN=carA PE=3
           SV=1
          Length = 376

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 129 EIPPNHITLQQGTIEEFSSKGQTSIVVNHFPYARKQP 239
           ++   H+ L  GT+E F+ K +  + V H P A   P
Sbjct: 320 DVEITHVNLNDGTLEGFAHKTRPILAVQHHPEASPGP 356
tr_hit_id B7YQF4
Definition tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein OS=Variovorax paradoxus S110
Align length 62
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920552|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E03.
         (458 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein OS=Variov...    34   3.2  
tr|A7HCT3|A7HCT3_ANADF Cell surface receptor IPT/TIG domain prot...    34   4.1  
tr|A4HUR2|A4HUR2_LEIIN Chromosome 10 (Fragment) OS=Leishmania in...    33   5.4  
tr|Q6C859|Q6C859_YARLI Serine hydroxymethyltransferase OS=Yarrow...    33   5.4  
tr|B5S1P3|B5S1P3_RALSO Aspartate/tyrosine/aromatic aminotransfer...    33   7.1  
tr|Q8ZTY2|Q8ZTY2_PYRAE Putative uncharacterized protein PAE3035 ...    33   7.1  
tr|B4D9B6|B4D9B6_9BACT Putative uncharacterized protein OS=Chtho...    33   9.2  
tr|B6P2B1|B6P2B1_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  

>tr|B7YQF4|B7YQF4_VARPD ABC transporter related protein
           OS=Variovorax paradoxus S110 GN=VaparDRAFT_3329 PE=4
           SV=1
          Length = 613

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 344 HERSSKRKFVNSLADNSITSLHSACI*FWMLSVKVGLFTSIGEVVDHNRGLAFTAKLLNG 165
           ++R   R  V++LA      L   CI FW+ S +  L  + G ++DH    A    +LN 
Sbjct: 63  YDRVLSRSGVSTLAALVCGILFFLCIEFWLRSGRSRLLRNAGAIIDHGVSGALLHSMLNR 122

Query: 164 PL 159
           PL
Sbjct: 123 PL 124


>tr|A7HCT3|A7HCT3_ANADF Cell surface receptor IPT/TIG domain protein
             OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2327
             PE=4 SV=1
          Length = 12684

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = +3

Query: 54    SCRSLSYAEKCKTFCSYHVRPLLGSEIPPNHITLQQGTIEEFSSKGQTSIVVNHFPYARK 233
             SCR+    + C++FC+ +V P  G      ++ +    ++ F + G +S   +++PYA +
Sbjct: 10048 SCRTSYSNDDCQSFCAEYVVPASG------NVLVSAEALDVFGASGTSS--YSYYPYANQ 10099

Query: 234   QPHLDTEHPKSY 269
              P +     + Y
Sbjct: 10100 PPSVSMSERRDY 10111


>tr|A4HUR2|A4HUR2_LEIIN Chromosome 10 (Fragment) OS=Leishmania
           infantum GN=LinJ10.1830 PE=4 SV=1
          Length = 1224

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +3

Query: 138 PNHITLQQGTIEEFSSKGQTSIVVNHFPYARKQPHLDTEHPKSYARTMQ*SNAVICQGIH 317
           P  ++   G   E   +G  ++   H   A K P LD  H  + + ++  S  V    +H
Sbjct: 215 PQRVSAAGGGRLELRMRGLVALPCLHLSAAPKSPSLDARHESTTSSSVHGSGDVAAGRLH 274

Query: 318 KLSFRRPFMSS 350
            +SFR+  +SS
Sbjct: 275 AVSFRQNAISS 285


>tr|Q6C859|Q6C859_YARLI Serine hydroxymethyltransferase OS=Yarrowia
           lipolytica GN=YALI0D22484g PE=3 SV=1
          Length = 481

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = +1

Query: 124 VQRYHPTISPFNRGPLRSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVMLLS 303
           +QR+     P NRG LR+ A KA P    T   +  ++P +   I+         + L+ 
Sbjct: 1   MQRFTRLSRPLNRGLLRAYATKASPDTQMTQQTLYASDPEIADIIKKETDRQIGSITLIP 60

Query: 304 AREFTN 321
           +  FT+
Sbjct: 61  SENFTS 66


>tr|B5S1P3|B5S1P3_RALSO Aspartate/tyrosine/aromatic aminotransferase
           protein OS=Ralstonia solanacearum MolK2 GN=RSMK01033
           PE=4 SV=1
          Length = 381

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 115 PCLVQRYHPTISPFNRGPLRSLAVKAKPLLWSTTSPMLVNNPTLTLSIQNHMHALCNEVM 294
           P L+ R+H  + P   G + SL + A    WS   P L         + +H+HA+ + V 
Sbjct: 243 PALMHRFHARLPPRLTGAVNSLGIDATVAAWSEGQPWLD-------VVLDHLHAMRDYVA 295

Query: 295 LLSAREF 315
               REF
Sbjct: 296 DALRREF 302


>tr|Q8ZTY2|Q8ZTY2_PYRAE Putative uncharacterized protein PAE3035
           OS=Pyrobaculum aerophilum GN=PAE3035 PE=4 SV=1
          Length = 160

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +1

Query: 28  ITRTFCNLCHAGLCPMQKNARHFVVT---TSAPCLVQRYHPTISPFNRGPLRSLAVK 189
           + R    + HAG+   +K A+H+VV    TS P +V      I PF+RG L  L ++
Sbjct: 89  LIRPIVKIRHAGV--QKKRAQHYVVVQFLTSHPAIVTEDFVQIGPFSRGDLAKLPLR 143


>tr|B4D9B6|B4D9B6_9BACT Putative uncharacterized protein
           OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_5506
           PE=3 SV=1
          Length = 193

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 221 GEVVDHNRGLAFTAKLLNGPLLKGDMVGWYL*TKQGA 111
           GE V+   G A T+ L+NG +L+ D + W L  +QGA
Sbjct: 105 GETVEITMGAARTSGLINGAVLRKDELDWELIFRQGA 141


>tr|B6P2B1|B6P2B1_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_101907 PE=4 SV=1
          Length = 608

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 32/103 (31%), Positives = 37/103 (35%)
 Frame = +1

Query: 31  TRTFCNLCHAGLCPMQKNARHFVVTTSAPCLVQRYHPTISPFNRGPLRSLAVKAKPLLWS 210
           T  FC  C+  +C M   A H    TS    V R     S   R  L  L  K K L W 
Sbjct: 204 TNVFCESCNIVVCSMCAQAAHIQHVTSD---VDR----ASESYRDILGQLVEKCKDLKWP 256

Query: 211 TTSPMLVNNPTLTLSIQNHMHALCNEVMLLSAREFTNFLLEDL 339
               +  N       IQN   AL + V     R+   FLL  L
Sbjct: 257 LEESLEKNIQETRFQIQNSTEALISHVTQF-IRKKEQFLLSQL 298