BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920554|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E05.
         (351 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 OS...    31   1.7  
sp|Q1CU21|DAPB_HELPH Dihydrodipicolinate reductase OS=Helicobact...    30   3.7  
sp|Q8K1M4|GLIS1_MOUSE Zinc finger protein GLIS1 OS=Mus musculus ...    29   6.3  
sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens ...    29   6.3  
sp|P34466|EIF3X_CAEEL Putative eukaryotic translation initiation...    29   6.3  

>sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1
           OS=Bovine herpesvirus 4 (strain DN-599) GN=IE1 PE=3 SV=1
          Length = 285

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 319 PTNPLKGPTRCCRCVICF*LRKWI 248
           PT PL G  RC RCV    L+ WI
Sbjct: 18  PTTPLTGQDRCARCVAINELKPWI 41


>sp|Q1CU21|DAPB_HELPH Dihydrodipicolinate reductase OS=Helicobacter
           pylori (strain HPAG1) GN=dapB PE=3 SV=1
          Length = 254

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 316 TNPLKGPTRCCRCVICF*LRKWIVHLLK 233
           TN LK   R C CVI F L K + HLL+
Sbjct: 52  TNDLKAFVRACECVIDFSLPKGLDHLLE 79


>sp|Q8K1M4|GLIS1_MOUSE Zinc finger protein GLIS1 OS=Mus musculus
           GN=Glis1 PE=2 SV=2
          Length = 789

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 171 VKSQDQPNSCKLQQISPMFSNLSRCTIHLRN 263
           V S ++PN C  +  S  FS L    IHLR+
Sbjct: 426 VHSGEKPNKCMFEGCSKAFSRLENLKIHLRS 456


>sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens
           GN=GLIS1 PE=2 SV=2
          Length = 620

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 171 VKSQDQPNSCKLQQISPMFSNLSRCTIHLRN 263
           V S ++PN C  +  S  FS L    IHLR+
Sbjct: 255 VHSGEKPNKCMFEGCSKAFSRLENLKIHLRS 285


>sp|P34466|EIF3X_CAEEL Putative eukaryotic translation initiation
           factor 3 subunit OS=Caenorhabditis elegans GN=clu-1 PE=2
           SV=1
          Length = 1247

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 147 FAPTFSSSVKSQDQPNSCKLQQISPMFSNLSRCTIHLRNQKQITHRQQRVGPLRGLVGTP 326
           F PT S+S K+  Q     LQ +SP F  +    +  R +K +  R     P+   VG P
Sbjct: 262 FDPTVSNSNKTVYQSVIELLQNVSPGFKKVYPQILKRRQEKTLVERLPTSYPVSSWVGNP 321

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920554|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E05.
         (351 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******