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NBDC - LSDB Archive
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BP920555
Clone id YMU001_000138_E06
Library
Length 449
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTAACCCTTGCAAACAACCACCAGCAAACAGTTTCCTTCTCATATTCAAAATTTGTAGTA
TGAGACATACATAAAAGGAGGCCTTGCCCACAGCTGCGGAACTCTGATAAAAAAAAATTA
CCAATTGCCAAAACGACTATGAGAAAGGCACCATTCGTTGGCATTCAGCCAAACGGATAC
AAGTAGTTGCGCATATGCAAGTGATCATGCAATGATGCGTGGATGATTCACTACCTTGCC
TCTTGTTCGATGTGCAATGGGACCAGCTTTGACTGGCTCGGTCATTAGTGCATACATTCT
CACAGGAAAAAGCTCCTTTGGAAACCCCTTTTGCATCTTTGTTTTGAGCAAGAACAGTCC
TGCTTGCTTGAAAAGGTCGCGATAATAAGCATCAGATCTTGTAATAGAGTTATCATCTTT
GTCCACCAGAAAACCATGCTTTGTCGTGT
■■Homology search results ■■ -
sp_hit_id P38340
Definition sp|P38340|YB9H_YEAST Methyltransferase-like protein YBR261C OS=Saccharomyces cerevisiae
Align length 50
Score (bit) 62.8
E-value 7.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920555|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E06.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38340|YB9H_YEAST Methyltransferase-like protein YBR261C OS=S...    63   7e-10
sp|O13748|YDRE_SCHPO Methyltransferase-like protein C16E8.14c OS...    52   2e-06
sp|Q5VVY1|ME11B_HUMAN Methyltransferase-like protein 11B OS=Homo...    44   2e-04
sp|Q9Z6Y2|PRIA_CHLPN Primosomal protein N' OS=Chlamydia pneumoni...    32   0.95 
sp|O84783|PRIA_CHLTR Primosomal protein N' OS=Chlamydia trachoma...    30   3.6  
sp|O13909|YDW1_SCHPO Uncharacterized protein C23C11.01 OS=Schizo...    30   6.1  
sp|O60729|CC14B_HUMAN Dual specificity protein phosphatase CDC14...    30   6.1  
sp|Q5ZJR8|ELOV6_CHICK Elongation of very long chain fatty acids ...    29   8.0  

>sp|P38340|YB9H_YEAST Methyltransferase-like protein YBR261C
           OS=Saccharomyces cerevisiae GN=YBR261C PE=1 SV=1
          Length = 232

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 27/50 (54%), Positives = 40/50 (80%)
 Frame = -3

Query: 423 DKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEP 274
           D+ D+S+TRSDA +R +F++AGL L+ ++ Q+G P+EL+PVRMYAL   P
Sbjct: 182 DETDSSVTRSDAKFRQIFEEAGLKLIASERQRGLPRELYPVRMYALKPMP 231


>sp|O13748|YDRE_SCHPO Methyltransferase-like protein C16E8.14c
           OS=Schizosaccharomyces pombe GN=SPAC16E8.14c PE=2 SV=1
          Length = 219

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = -3

Query: 423 DKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALM 283
           D  D+S+TR +   + LFK+A L ++   +Q GFP+ELFPV+MYAL+
Sbjct: 169 DPIDSSVTRCEQSLKSLFKKANLVVVAETLQHGFPEELFPVKMYALV 215


>sp|Q5VVY1|ME11B_HUMAN Methyltransferase-like protein 11B OS=Homo
           sapiens GN=METTL11B PE=3 SV=1
          Length = 275

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYAL 286
           + G ++D  D+S+TR     R L +++GL +L  + Q GFP++  PV M+AL
Sbjct: 224 REGCILDLSDSSVTRDMDILRSLIRKSGLVVLGQEKQDGFPEQCIPVWMFAL 275


>sp|Q9Z6Y2|PRIA_CHLPN Primosomal protein N' OS=Chlamydia pneumoniae
           GN=priA PE=3 SV=1
          Length = 749

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 143 ERHHSLAFSQTDTSSCAYASDHAMMRG*FTTLPLVRCAMGPAL---TGSVISAYILTGKS 313
           +  H  A+ QT++  C +A D A+MRG      +V  +  P+L   T ++   Y+L+  S
Sbjct: 333 DEEHDPAYKQTESPPCYHARDVAVMRGKLAHATVVLGSATPSLESYTNALSGKYVLSRLS 392

Query: 314 S 316
           S
Sbjct: 393 S 393


>sp|O84783|PRIA_CHLTR Primosomal protein N' OS=Chlamydia trachomatis
           GN=priA PE=3 SV=1
          Length = 753

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +2

Query: 143 ERHHSLAFSQTDTSSCAYASDHAMMRG*FTTLPLVRCAMGPAL---TGSVISAY---ILT 304
           +  H  A+ Q+D      A D A+MRG  T   ++  +  P+L   T ++   Y   +L+
Sbjct: 337 DEEHDSAYKQSDLPPFYQARDVAVMRGKMTNATVILGSATPSLESYTNALSKKYTLSVLS 396

Query: 305 GKSSFGNPFCIFVLSKN 355
            ++S   P  +F++  N
Sbjct: 397 KRASTSTPTKVFLIDMN 413


>sp|O13909|YDW1_SCHPO Uncharacterized protein C23C11.01
           OS=Schizosaccharomyces pombe GN=SPAC23C11.01 PE=2 SV=1
          Length = 441

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 197 HMRNYLYPFG*MPTNGAFLIVVLAIGNFFLSEFRSCGQGLLLCM 66
           H RN L  FG   + G FL++++ +G  F    R CG  L L +
Sbjct: 51  HFRNMLAMFGNFLSLGFFLVIIVLVGIAFEIGGRFCGLILTLAL 94


>sp|O60729|CC14B_HUMAN Dual specificity protein phosphatase CDC14B
           OS=Homo sapiens GN=CDC14B PE=1 SV=1
          Length = 498

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +2

Query: 62  ETYIKGGLAHSCGTLIKKNYQL--PKRL*ER---HHSLAFSQTDTSSCAYASDHAMMRG* 226
           ETYI+    H+  T+I+ N ++   KR  +    HH L F+   T + A   +   +   
Sbjct: 246 ETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICEN 305

Query: 227 FTTLPLVRCAMGPALTGSVISAYIL 301
                 V C  G   TG++I+ YI+
Sbjct: 306 AEGAIAVHCKAGLGRTGTLIACYIM 330


>sp|Q5ZJR8|ELOV6_CHICK Elongation of very long chain fatty acids
           protein 6 OS=Gallus gallus GN=ELOVL6 PE=2 SV=1
          Length = 265

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 235 LASCSMCNGTSFDWLGH*CIHSHRKKLLWKPLLHLCF 345
           L  C + N   F W+ H   HSH + ++W  L++L +
Sbjct: 207 LVGC-VINYLVFSWMQHGQCHSHVQNIIWSSLMYLSY 242
tr_hit_id A9RIZ3
Definition tr|A9RIZ3|A9RIZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 83
Score (bit) 92.4
E-value 1.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920555|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_E06.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RIZ3|A9RIZ3_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|Q5PP70|Q5PP70_ARATH At5g44450 OS=Arabidopsis thaliana PE=2 SV=1     84   4e-15
tr|B6U3Z6|B6U3Z6_MAIZE S-adenosylmethionine-dependent methyltran...    83   6e-15
tr|Q9AY72|Q9AY72_ORYSJ Putative uncharacterized protein OSJNBa00...    81   2e-14
tr|A3ANA2|A3ANA2_ORYSJ Putative uncharacterized protein OS=Oryza...    81   2e-14
tr|A2XMJ1|A2XMJ1_ORYSI Putative uncharacterized protein OS=Oryza...    81   2e-14
tr|Q10CT5|Q10CT5_ORYSJ Os03g0780900 protein OS=Oryza sativa subs...    78   3e-13
tr|A7Q4W2|A7Q4W2_VITVI Chromosome chr10 scaffold_50, whole genom...    78   3e-13
tr|B6KIP0|B6KIP0_TOXGO Putative uncharacterized protein OS=Toxop...    65   2e-09
tr|Q0V7C7|Q0V7C7_PHANO Putative uncharacterized protein OS=Phaeo...    65   2e-09
tr|A7TKI0|A7TKI0_VANPO Putative uncharacterized protein OS=Vande...    65   2e-09
tr|A7E5R8|A7E5R8_SCLS1 Putative uncharacterized protein OS=Scler...    63   6e-09
tr|B5VEL0|B5VEL0_YEAS6 YBR261Cp-like protein OS=Saccharomyces ce...    63   8e-09
tr|B3LMQ0|B3LMQ0_YEAS1 Putative uncharacterized protein OS=Sacch...    63   8e-09
tr|A6ZLK1|A6ZLK1_YEAS7 Conserved protein OS=Saccharomyces cerevi...    63   8e-09
tr|Q6CI87|Q6CI87_YARLI YALI0A00638p OS=Yarrowia lipolytica GN=YA...    62   1e-08
tr|Q5AFJ9|Q5AFJ9_CANAL Putative uncharacterized protein (Putativ...    62   2e-08
tr|A6S110|A6S110_BOTFB Predicted protein OS=Botryotinia fuckelia...    62   2e-08
tr|A4I5B4|A4I5B4_LEIIN Putative uncharacterized protein OS=Leish...    61   2e-08
tr|A4HI37|A4HI37_LEIBR Putative uncharacterized protein OS=Leish...    61   2e-08
tr|Q6FQ46|Q6FQ46_CANGA Similar to uniprot|P38340 Saccharomyces c...    61   2e-08
tr|Q55DH6|Q55DH6_DICDI Putative uncharacterized protein OS=Dicty...    61   3e-08
tr|Q4CTB6|Q4CTB6_TRYCR Putative uncharacterized protein OS=Trypa...    61   3e-08
tr|Q4CQ40|Q4CQ40_TRYCR Putative uncharacterized protein OS=Trypa...    61   3e-08
tr|Q6BYZ5|Q6BYZ5_DEBHA DEHA2A05786p OS=Debaryomyces hansenii GN=...    61   3e-08
tr|A3LWD7|A3LWD7_PICST Predicted protein OS=Pichia stipitis GN=P...    61   3e-08
tr|A5E7D3|A5E7D3_LODEL Putative uncharacterized protein OS=Lodde...    60   4e-08
tr|Q4Q7M2|Q4Q7M2_LEIMA Putative uncharacterized protein OS=Leish...    60   5e-08
tr|Q9UVE4|Q9UVE4_ZYGRO Putative uncharacterized protein OS=Zygos...    59   9e-08
tr|A4QTN6|A4QTN6_MAGGR Putative uncharacterized protein OS=Magna...    59   9e-08

>tr|A9RIZ3|A9RIZ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175325 PE=4 SV=1
          Length = 286

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           K+GF+VDK+D S+TRSDAY+RDL KQ GL+L KTK+QKGFPK+LF VRMYA+  EP    
Sbjct: 203 KNGFVVDKEDTSVTRSDAYFRDLLKQTGLYLYKTKLQKGFPKDLFAVRMYAVTPEPRIPT 262

Query: 261 PIAHRTRG------KVVNHPRII 211
           P A  ++       + +N PR I
Sbjct: 263 PAAAESKALPVRPKRRINQPRKI 285


>tr|Q5PP70|Q5PP70_ARATH At5g44450 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 276

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           K+GF++DK+D+SITRSD Y++ LF+Q GL L +TK QKG P+ELF V+MYAL    V   
Sbjct: 201 KNGFVLDKEDHSITRSDPYFKQLFRQCGLHLYRTKDQKGLPQELFAVKMYAL---TVDTP 257

Query: 261 PIAHRTRGKV-VNHPRII 211
           P  HRTR K   N P+II
Sbjct: 258 PKIHRTRSKTRSNRPQII 275


>tr|B6U3Z6|B6U3Z6_MAIZE S-adenosylmethionine-dependent
           methyltransferase/ methyltransferase OS=Zea mays PE=2
           SV=1
          Length = 303

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           ++GF++DK DNS+TRSDAY+RDLFK+ GL++L  K QK  PKELF V+MYAL+T   K  
Sbjct: 227 RNGFVLDKVDNSVTRSDAYFRDLFKRCGLYILSVKDQKELPKELFAVKMYALVTSQPKIQ 286

Query: 261 PIAHRTRGKVVNHPRII 211
               R R +  N PR+I
Sbjct: 287 NSGKRRRPR--NSPRMI 301


>tr|Q9AY72|Q9AY72_ORYSJ Putative uncharacterized protein
           OSJNBa0091J19.10 (AFR615Wp, putative, expressed)
           OS=Oryza sativa subsp. japonica GN=OSJNBa0091J19.10 PE=4
           SV=1
          Length = 307

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           ++GF++DK+DNSITRSDAY+++LFK+ GL++   K Q   PKELF V+MYAL+TE  K  
Sbjct: 231 RNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFAVKMYALVTEKPKIQ 290

Query: 261 PIAHRTRGKVVNHPRII 211
               R R K  N PR+I
Sbjct: 291 KNGKRRRPK--NSPRMI 305


>tr|A3ANA2|A3ANA2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012274 PE=4 SV=1
          Length = 307

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           ++GF++DK+DNSITRSDAY+++LFK+ GL++   K Q   PKELF V+MYAL+TE  K  
Sbjct: 231 RNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFAVKMYALVTEKPKIQ 290

Query: 261 PIAHRTRGKVVNHPRII 211
               R R K  N PR+I
Sbjct: 291 KNGKRRRPK--NSPRMI 305


>tr|A2XMJ1|A2XMJ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13745 PE=4 SV=1
          Length = 307

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           ++GF++DK+DNSITRSDAY+++LFK+ GL++   K Q   PKELF V+MYAL+TE  K  
Sbjct: 231 RNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFAVKMYALVTEKPKIQ 290

Query: 261 PIAHRTRGKVVNHPRII 211
               R R K  N PR+I
Sbjct: 291 KNGKRRRPK--NSPRMI 305


>tr|Q10CT5|Q10CT5_ORYSJ Os03g0780900 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0780900 PE=2 SV=1
          Length = 413

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 37/69 (53%), Positives = 50/69 (72%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAG 262
           ++GF++DK+DNSITRSDAY+++LFK+ GL++   K Q   PKELF V+MYAL+TE  K  
Sbjct: 231 RNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFAVKMYALVTEKPKIQ 290

Query: 261 PIAHRTRGK 235
               R R K
Sbjct: 291 KNGKRRRPK 299


>tr|A7Q4W2|A7Q4W2_VITVI Chromosome chr10 scaffold_50, whole genome
           shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00029874001 PE=4 SV=1
          Length = 185

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = -3

Query: 441 KHGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVK 268
           + GF++DK+D SITRSD Y+++LF Q GL L K+K QKGFP ELFPV+MYAL T+  K
Sbjct: 110 RSGFVLDKEDRSITRSDLYFKELFGQCGLHLYKSKDQKGFPGELFPVKMYALTTDMPK 167


>tr|B6KIP0|B6KIP0_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_001720 PE=4 SV=1
          Length = 258

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = -3

Query: 435 GFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTEPVKAGP 259
           GF +DK DNSI R+D +Y+ LF+QAG+ LL    Q  FPK LFPV MY L   P+ A P
Sbjct: 192 GFEIDKQDNSIMRTDKHYKQLFRQAGMRLLLDMRQPNFPKSLFPVNMYCL--RPLDANP 248


>tr|Q0V7C7|Q0V7C7_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_00087 PE=4 SV=1
          Length = 263

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = -3

Query: 438 HGFLVDKDDNSITRSDAYYRDLFKQAGLFLLKTKMQKGFPKELFPVRMYALMTE 277
           H  + D++D+S+TRSD  +R LF+QAGL ++ T+ Q+G PKEL+PVR+YAL  E
Sbjct: 210 HKDIYDEEDSSVTRSDDKFRRLFQQAGLKIVATEQQRGMPKELYPVRIYALKPE 263