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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920567
Clone id YMU001_000138_F06
Library
Length 109
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGAAGAACCCAAATCGATTTCCAAATAGCCAGTGCGTTTTCCACTTTCCGGAGCCCAGTA
AGTGGACAAATCATCATTCAATATCTCCGTGGCTTCATAGCCTACTCCT
■■Homology search results ■■ -
sp_hit_id Q7XUR3
Definition sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica
Align length 33
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920567|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F06.
         (109 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sat...    31   2.2  
sp|A1JQW2|CCA_YERE8 Multifunctional CCA protein OS=Yersinia ente...    30   3.8  

>sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sativa
           subsp. japonica GN=Os04g0560400 PE=3 SV=2
          Length = 517

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           +  + +L + + +YWAPE G+ +  +  DLG S
Sbjct: 369 FAPSNVLQESIYSYWAPEEGQSSWEMLFDLGQS 401


>sp|A1JQW2|CCA_YERE8 Multifunctional CCA protein OS=Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
           GN=cca PE=3 SV=1
          Length = 414

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  FPNSQCVFHFPEPSKWTNHHSISPWLHSLL 107
           FP  +C+F  P P KW  H  I   +H+L+
Sbjct: 207 FPEIECLFGVPAPEKW--HPEIDTGIHTLM 234
tr_hit_id Q8XJ85
Definition tr|Q8XJ85|Q8XJ85_CLOPE Putative uncharacterized protein CPE1876 OS=Clostridium perfringens
Align length 33
Score (bit) 42.7
E-value 0.009
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920567|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F06.
         (109 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8XJ85|Q8XJ85_CLOPE Putative uncharacterized protein CPE1876 ...    43   0.009
tr|Q0TP82|Q0TP82_CLOP1 Calx-beta domain protein OS=Clostridium p...    43   0.009
tr|Q0SRV0|Q0SRV0_CLOPS FucA OS=Clostridium perfringens (strain S...    43   0.009
tr|B1RJM9|B1RJM9_CLOPE Calx-beta domain protein OS=Clostridium p...    43   0.009
tr|B1RB53|B1RB53_CLOPE Calx-beta domain protein OS=Clostridium p...    43   0.009
tr|B1BT34|B1BT34_CLOPE Calx-beta domain protein OS=Clostridium p...    43   0.009
tr|B1BIY6|B1BIY6_CLOPE Calx-beta domain protein OS=Clostridium p...    43   0.009
tr|B1RL18|B1RL18_CLOPE Calx-beta domain protein OS=Clostridium p...    41   0.026
tr|A9S836|A9S836_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.045
tr|B1C411|B1C411_9FIRM Putative uncharacterized protein OS=Clost...    37   0.38 
tr|A2ETX7|A2ETX7_TRIVA Calx-beta domain containing protein OS=Tr...    36   0.85 
tr|B6WM63|B6WM63_9BACE Putative uncharacterized protein OS=Bacte...    33   7.2  
tr|B3KJW5|B3KJW5_9BACI Alpha-L-fucosidase OS=Geobacillus sp. Y41...    33   9.4  
tr|B6MUR6|B6MUR6_BRAFL Putative uncharacterized protein OS=Branc...    33   9.4  
tr|A7SRT9|A7SRT9_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   9.4  

>tr|Q8XJ85|Q8XJ85_CLOPE Putative uncharacterized protein CPE1876
           OS=Clostridium perfringens GN=CPE1876 PE=4 SV=1
          Length = 750

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGES 410


>tr|Q0TP82|Q0TP82_CLOP1 Calx-beta domain protein OS=Clostridium
           perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
           GN=CPF_2130 PE=4 SV=1
          Length = 932

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|Q0SRV0|Q0SRV0_CLOPS FucA OS=Clostridium perfringens (strain
           SM101 / Type A) GN=CPR_1843 PE=4 SV=1
          Length = 750

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|B1RJM9|B1RJM9_CLOPE Calx-beta domain protein OS=Clostridium
           perfringens CPE str. F4969 GN=AC5_2220 PE=4 SV=1
          Length = 932

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|B1RB53|B1RB53_CLOPE Calx-beta domain protein OS=Clostridium
           perfringens B str. ATCC 3626 GN=AC1_2364 PE=4 SV=1
          Length = 932

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|B1BT34|B1BT34_CLOPE Calx-beta domain protein OS=Clostridium
           perfringens E str. JGS1987 GN=AC3_2406 PE=4 SV=1
          Length = 932

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|B1BIY6|B1BIY6_CLOPE Calx-beta domain protein OS=Clostridium
           perfringens C str. JGS1495 GN=CPC_2120 PE=4 SV=1
          Length = 932

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ D  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGDYDTYWAPDNSSKTGTIEIDLGGS 410


>tr|B1RL18|B1RL18_CLOPE Calx-beta domain protein OS=Clostridium
           perfringens NCTC 8239 GN=AC7_2130 PE=4 SV=1
          Length = 932

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           Y A +I++ +  TYWAP++  +TG +EIDLG S
Sbjct: 378 YGANKIVDGEYDTYWAPDNSSKTGTIEIDLGES 410


>tr|A9S836|A9S836_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209606 PE=4 SV=1
          Length = 458

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 99  YEATEILNDDLSTYWAPESGKRTGYLEIDLGSS 1
           +   ++LNDDL  YWA E G  T +L +DLGS+
Sbjct: 333 FRPDQVLNDDLEAYWASEEGLTTPFLTLDLGSN 365


>tr|B1C411|B1C411_9FIRM Putative uncharacterized protein
           OS=Clostridium spiroforme DSM 1552 GN=CLOSPI_01979 PE=4
           SV=1
          Length = 1853

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
 Frame = -2

Query: 102 GYEATEIL--NDDLSTYWAPESGKRTGYLEIDLG 7
           G++A +    ND+LS+ WA + G+RTG+L +DLG
Sbjct: 63  GFDAEKAFDGNDELSSRWAAKEGERTGWLSVDLG 96