BP920570
Clone id YMU001_000138_F09
Library
Length 454
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAAACGACGTCGCAGGAACAATCTCTACCCGACCAGTCGGGAGGGAGGGAGAGCGCGCGC
AGAGGCGATGGGATTATCAAGGAGTTCTTTGGGTATCTCATTCAGCGGAGCATGGAGGAT
CCAGAAGAACGCGATCGCAAGATCCGCGAGCACATCATTACCACCAAGGCCAACGCCGAG
AAGGTGAAGCAAAGATGGGCGCACCCTGTCAAGCCATACGGCTACTGGACCACCGATAAG
TATAACTACAAGTACCAACTGGAACGTAAGATAAGCAATGCCCGAGGCCGCCACGATCCT
TGGGACATTTTTTCCTAATCCCAGGTAAAGTTATCTGCAGTGGTTTCCATCAGCATAAGT
CACCAGATCTAATCGACAGTCTTGAGTATTCATAGAACTCTCCCGGTTGTGTTGTTGTGT
CTAGCAATGGATAATGTTTCAGGTTTTTTAGCTC
■■Homology search results ■■ -
sp_hit_id P77624
Definition sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI OS=Escherichia coli (strain K12)
Align length 56
Score (bit) 32.7
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920570|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F09.
(454 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI OS=Esche... 33 0.76
sp|Q8VC98|PKHA4_MOUSE Pleckstrin homology domain-containing fami... 30 3.7
sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel... 30 4.8
sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes prote... 30 6.4
sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing fami... 29 8.2
sp|Q73H09|SSRP_WOLPM SsrA-binding protein OS=Wolbachia pipientis... 29 8.4
sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rat... 29 8.4
sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=M... 29 8.4
sp|Q5U3J8|LTV1_DANRE Protein LTV1 homolog OS=Danio rerio GN=ltv1... 29 8.4
sp|Q8G7I6|G6PI_BIFLO Glucose-6-phosphate isomerase OS=Bifidobact... 29 8.4

>sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI
OS=Escherichia coli (strain K12) GN=yahI PE=3 SV=1
Length = 316

Score = 32.7 bits (73), Expect = 0.76
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1

Query: 91 GYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKYQ 258
GYLIQ+++ + R + + + T+ +K +AHP KP G + +D + Q
Sbjct: 90 GYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQ 145


>sp|Q8VC98|PKHA4_MOUSE Pleckstrin homology domain-containing family
A member 4 OS=Mus musculus GN=Plekha4 PE=2 SV=1
Length = 588

Score = 30.4 bits (67), Expect = 3.7
Identities = 25/91 (27%), Positives = 36/91 (39%)
Frame = +3

Query: 102 SAEHGGSRRTRSQDPRAHHYHQGQRREGEAKMGAPCQAIRLLDHR*V*LQVPTGT*DKQC 281
S+E GG R RS PR + + + +A G+ LQ+P
Sbjct: 302 SSEAGGERPPRSPQPRTP---EQRTQSTQATSGSSTY-----------LQLP-------- 339

Query: 282 PRPPRSLGHFFLIPGKVICSGFHQHKSPDLI 374
PRPP + L+PG + S HQ D +
Sbjct: 340 PRPPGTQASMILLPGPPVDSALHQSLETDTL 370


>sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel
subunit alpha-1A OS=Homo sapiens GN=CACNA1A PE=1 SV=2
Length = 2505

Score = 30.0 bits (66), Expect = 4.8
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +3

Query: 99 HSAEHGGSRRTRSQDPRA-----HHYHQGQRREGEAKMGAPCQAIRLLDHR 236
H GGSR +RS PR H H+ RR GE G +A R HR
Sbjct: 933 HVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPGEE--GPEDKAERRARHR 981


>sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes protein
5 OS=Gallus gallus GN=SMC5 PE=2 SV=1
Length = 1065

Score = 29.6 bits (65), Expect = 6.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1

Query: 100 IQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVK 213
IQ+ ME EE +++ ++ K + K+K+RW +P+K
Sbjct: 864 IQKLMESIEENKKELDDY----KQSISKIKERWLNPLK 897


>sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing family
A member 4 OS=Homo sapiens GN=PLEKHA4 PE=1 SV=2
Length = 779

Score = 29.3 bits (64), Expect = 8.2
Identities = 25/90 (27%), Positives = 34/90 (37%)
Frame = +3

Query: 105 AEHGGSRRTRSQDPRAHHYHQGQRREGEAKMGAPCQAIRLLDHR*V*LQVPTGT*DKQCP 284
+E GG + RS H Q +A G+P LQ+P P
Sbjct: 303 SEAGGGKPPRSPQ------HWSQEPRTQAHSGSPTY-----------LQLP--------P 337

Query: 285 RPPRSLGHFFLIPGKVICSGFHQHKSPDLI 374
RPP + L+PG + S FHQ D +
Sbjct: 338 RPPGTRASMVLLPGPPLESTFHQSLETDTL 367


>sp|Q73H09|SSRP_WOLPM SsrA-binding protein OS=Wolbachia pipientis
wMel GN=smpB PE=3 SV=1
Length = 149

Score = 29.3 bits (64), Expect = 8.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1

Query: 73 IIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYK 252
I++EF ++ S E R+RK+ I+ EK + W H + Y ++ N+K
Sbjct: 16 ILEEFEAGMVLLSSEVKSLRERKVN---ISDAYVVEKNSEVWLHNMHIAEYKAANRKNHK 72

Query: 253 YQLERKI 273
+ ERK+
Sbjct: 73 PKRERKL 79


>sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rattus
norvegicus GN=Mark2 PE=1 SV=1
Length = 722

Score = 29.3 bits (64), Expect = 8.4
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1

Query: 28 PDQSGGRESARRG--DGIIKEFFGYLIQRSMEDPEERDR--KIREHII 159
P G RRG I +F ++R++ +PE +DR +R H++
Sbjct: 560 PASPSGHSQGRRGASGSIFSKFTSKFVRRNLNEPESKDRVETLRPHVV 607


>sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=Mus
musculus GN=Mark2 PE=1 SV=3
Length = 776

Score = 29.3 bits (64), Expect = 8.4
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1

Query: 28 PDQSGGRESARRG--DGIIKEFFGYLIQRSMEDPEERDR--KIREHII 159
P G RRG I +F ++R++ +PE +DR +R H++
Sbjct: 614 PASPSGHSQGRRGASGSIFSKFTSKFVRRNLNEPESKDRVETLRPHVV 661


>sp|Q5U3J8|LTV1_DANRE Protein LTV1 homolog OS=Danio rerio GN=ltv1
PE=2 SV=1
Length = 469

Score = 29.3 bits (64), Expect = 8.4
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +1

Query: 94 YLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKYQLERKI 273
+L+ RS +DP D +H++ E K++ + +G + D Y+Y L
Sbjct: 19 HLVHRSQKDPLAADETAPQHVLLPTVRVELEKRK--EEQRNFGVFFDDDYDYLQHLREST 76

Query: 274 SNA 282
A
Sbjct: 77 QTA 79


>sp|Q8G7I6|G6PI_BIFLO Glucose-6-phosphate isomerase
OS=Bifidobacterium longum GN=pgi PE=3 SV=1
Length = 566

Score = 29.3 bits (64), Expect = 8.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1

Query: 118 DPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYW 228
D ++ I++H + N EKV++ P +G+W
Sbjct: 247 DEAQKAEAIKKHFVAVSTNLEKVEEFGIDPNNAFGFW 283


tr_hit_id A9RBY6
Definition tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 79
Score (bit) 89.4
E-value 8.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920570|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F09.
(454 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17
tr|Q9FYF8|Q9FYF8_ARATH F1N21.17 (At1g67350) (Putative uncharacte... 86 7e-16
tr|A9P8A9|A9P8A9_POPTR Putative uncharacterized protein OS=Popul... 85 2e-15
tr|Q5YJQ2|Q5YJQ2_HYAOR Putative uncharacterized protein OS=Hyaci... 83 6e-15
tr|Q5YJP9|Q5YJP9_HYAOR At1g67350-like protein OS=Hyacinthus orie... 83 6e-15
tr|B6SI77|B6SI77_MAIZE Putative uncharacterized protein OS=Zea m... 81 3e-14
tr|Q6AVU9|Q6AVU9_ORYSJ Os03g0685900 protein OS=Oryza sativa subs... 80 5e-14
tr|B6TWW8|B6TWW8_MAIZE Putative uncharacterized protein OS=Zea m... 80 5e-14
tr|A2XKS7|A2XKS7_ORYSI Putative uncharacterized protein OS=Oryza... 80 5e-14
tr|A7QP62|A7QP62_VITVI Chromosome chr1 scaffold_136, whole genom... 79 9e-14
tr|A5BVR1|A5BVR1_VITVI Putative uncharacterized protein OS=Vitis... 79 9e-14
tr|Q2PXN5|Q2PXN5_ARAHY RW1-like protein (Fragment) OS=Arachis hy... 71 3e-11
tr|A9NN34|A9NN34_PICSI Putative uncharacterized protein OS=Picea... 70 5e-11
tr|A4S8M2|A4S8M2_OSTLU Predicted protein OS=Ostreococcus lucimar... 38 0.22
tr|A6PQ76|A6PQ76_9BACT Putative uncharacterized protein OS=Victi... 34 3.2
tr|Q4SNT1|Q4SNT1_TETNG Chromosome 15 SCAF14542, whole genome sho... 34 4.2
tr|A8N361|A8N361_COPC7 Putative uncharacterized protein OS=Copri... 33 5.4
tr|B0VF60|B0VF60_9BACT Putative N6 adenine-specific DNA methyltr... 33 7.1
tr|B7QNI8|B7QNI8_IXOSC UDP-GalNAc:beta-1,3-N-acetylgalactosaminy... 33 7.1
tr|Q30X26|Q30X26_DESDG Putative uncharacterized protein OS=Desul... 33 7.1
tr|Q3Z573|Q3Z573_SHISS Putative kinase OS=Shigella sonnei (strai... 33 9.3
tr|B6I0A3|B6I0A3_ECOSE Carbamate kinase OS=Escherichia coli (str... 33 9.3
tr|B1ZXQ4|B1ZXQ4_OPITP ATPase involved in DNA repair OS=Opitutus... 33 9.3
tr|B1J0V4|B1J0V4_ECOLC Carbamate kinase OS=Escherichia coli (str... 33 9.3
tr|A7ZI65|A7ZI65_ECO24 Carbamate kinase family protein OS=Escher... 33 9.3
tr|B7L452|B7L452_ECOLX Putative carbamate kinase OS=Escherichia ... 33 9.3
tr|B3XFB5|B3XFB5_ECOLX Carbamate kinase family protein OS=Escher... 33 9.3
tr|B3WL30|B3WL30_ECOLX Carbamate kinase family protein OS=Escher... 33 9.3
tr|B3IJ37|B3IJ37_ECOLX Carbamate kinase family protein OS=Escher... 33 9.3
tr|B3I700|B3I700_ECOLX Carbamate kinase family protein OS=Escher... 33 9.3

>tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_62174 PE=4 SV=1
Length = 89

Score = 89.4 bits (220), Expect = 8e-17
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G + EF + I+RSME+P+ERD K R+H+ +TK K+K+ WA+PVKPYG W TDK N+
Sbjct: 2 GFMMEFVEHWIRRSMENPDERDAKFRKHVYSTKEQCVKLKESWANPVKPYGSWNTDKNNH 61

Query: 250 KYQLERKISNARGRHDPWD 306
K+ + +S GR DP++
Sbjct: 62 KFLQDLTLSRMPGRSDPYE 80


>tr|Q9FYF8|Q9FYF8_ARATH F1N21.17 (At1g67350) (Putative
uncharacterized protein) OS=Arabidopsis thaliana PE=4
SV=1
Length = 98

Score = 86.3 bits (212), Expect = 7e-16
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G I EF L+ R ME+PEERDRK REHI +K+K+ WA P++PYG+WT +++N
Sbjct: 2 GFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNA 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + + +IS GR DP+D
Sbjct: 62 QLRWDPQISQVAGRRDPYD 80


>tr|A9P8A9|A9P8A9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 91

Score = 84.7 bits (208), Expect = 2e-15
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G I EF L+ R MEDP+ERDRK RE + K +K K+ W++P++PYG+WT +++N
Sbjct: 2 GFIMEFAENLVLRLMEDPKERDRKFRERVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNA 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS GR DP+D
Sbjct: 62 QLAWDAQISQVPGRRDPYD 80


>tr|Q5YJQ2|Q5YJQ2_HYAOR Putative uncharacterized protein
OS=Hyacinthus orientalis PE=4 SV=1
Length = 91

Score = 83.2 bits (204), Expect = 6e-15
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +1

Query: 76 IKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKY 255
+ EF LI R MEDP+ERD++ REH+ K +K K+ W+ P++PYG+WT D++N +
Sbjct: 4 VMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFNAQL 63

Query: 256 QLERKISNARGRHDPWD 306
+ +IS GR DP+D
Sbjct: 64 AWDSQISQVPGRRDPYD 80


>tr|Q5YJP9|Q5YJP9_HYAOR At1g67350-like protein OS=Hyacinthus
orientalis PE=4 SV=1
Length = 91

Score = 83.2 bits (204), Expect = 6e-15
Identities = 34/77 (44%), Positives = 51/77 (66%)
Frame = +1

Query: 76 IKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKY 255
+ EF LI R MEDP+ERD++ REH+ K +K K+ W+ P++PYG+WT D++N +
Sbjct: 4 VMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFNAQL 63

Query: 256 QLERKISNARGRHDPWD 306
+ +IS GR DP+D
Sbjct: 64 AWDAQISQVPGRRDPYD 80


>tr|B6SI77|B6SI77_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 93

Score = 80.9 bits (198), Expect = 3e-14
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G I +F LI R MEDP++RD+ REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 2 GFIMDFAENLILRLMEDPDKRDQVRREHVYKMKERCERTKAAWSLPLRPYGFWTFDRFNS 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS A GR DP+D
Sbjct: 62 QLSWDPQISQAAGRRDPYD 80


>tr|Q6AVU9|Q6AVU9_ORYSJ Os03g0685900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0024N19.16 PE=4 SV=1
Length = 94

Score = 80.1 bits (196), Expect = 5e-14
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G + EF LI R MEDP +RD REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 2 GFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFNS 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS+A GR DP+D
Sbjct: 62 QLSWDPQISHAPGRRDPYD 80


>tr|B6TWW8|B6TWW8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 93

Score = 80.1 bits (196), Expect = 5e-14
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G I +F +I R MEDP++RD+ REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 2 GFIMDFAENMILRLMEDPDKRDQVRREHVYKMKERCERTKAAWSLPLRPYGFWTFDRFNS 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS A GR DP+D
Sbjct: 62 QLSWDPQISQAAGRRDPYD 80


>tr|A2XKS7|A2XKS7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13066 PE=4 SV=1
Length = 94

Score = 80.1 bits (196), Expect = 5e-14
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G + EF LI R MEDP +RD REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 2 GFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFNS 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS+A GR DP+D
Sbjct: 62 QLSWDPQISHAPGRRDPYD 80


>tr|A7QP62|A7QP62_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002814001
PE=4 SV=1
Length = 91

Score = 79.3 bits (194), Expect = 9e-14
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +1

Query: 70 GIIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNY 249
G I EF LI + MEDP+ERDR+ RE + K ++ K+ W+ P++PYG+WT +++N
Sbjct: 2 GFIMEFAENLILKLMEDPKERDRRARERLYAVKDRCDRTKEIWSFPIRPYGFWTFERHNS 61

Query: 250 KYQLERKISNARGRHDPWD 306
+ + +IS GR DP+D
Sbjct: 62 QLAWDPQISQVPGRRDPYD 80