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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920572
Clone id YMU001_000138_F11
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGGTTGTAATGCTATGCATACAAAGAGCATCACTGCAAGCAGAACTCGGCCAAGGAC
CCTTGCAATGAATGTCAGCCTGCAATTCGGGCTGACAAGGTTACAAAGCAAAGGTCTGCT
AACAAGCAAGCAATGGGAAGGGGGACTGAGAAAGATGGATTCTCTGAAATCCAAGCATCT
GACTATGTGAACGACGGGTTTGAACAAAAGCTCCAGGCGCAAAATGCTGCACGCATGTAG
AACTTCCACGGGAGAAGAGAAAGGCATGCCTGGTGGAAAGTCCATAGTTTGAGCTCTGCA
GAGCCCTCTGGGAAGCGTAACCCATCGTGAGAGCTCGTTGGGAGATCTATTGAAATGCGC
AAACTTTCTCCTTGTGATGGGCAACCCCGGGCATCTCTTCTTGTGGATGCGTGAGCATAC
AATGCTTGAACGGCCGCATTTGAGACTACCGAATCGTAAGC
■■Homology search results ■■ -
sp_hit_id P18728
Definition sp|P18728|ZG53_XENLA Gastrula zinc finger protein XlCGF53.1 (Fragment) OS=Xenopus laevis
Align length 73
Score (bit) 32.3
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920572|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F11.
         (461 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P18728|ZG53_XENLA Gastrula zinc finger protein XlCGF53.1 (Fra...    32   1.0  
sp|Q8BWQ4|FTSJ1_MOUSE FtsJ methyltransferase domain-containing p...    32   1.3  
sp|Q96KM6|Z512B_HUMAN Zinc finger protein 512B OS=Homo sapiens G...    32   1.7  
sp|Q8TF72|SHRM3_HUMAN Protein Shroom3 OS=Homo sapiens GN=SHROOM3...    31   2.2  
sp|Q60585|ZFP30_MOUSE Zinc finger protein 30 OS=Mus musculus GN=...    30   3.8  
sp|Q4KMG0|CDON_HUMAN Cell adhesion molecule-related/down-regulat...    30   3.8  
sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing prot...    30   3.8  
sp|Q9Y2G7|ZFP30_HUMAN Zinc finger protein 30 homolog OS=Homo sap...    30   5.0  
sp|O75290|Z780A_HUMAN Zinc finger protein 780A OS=Homo sapiens G...    30   6.5  
sp|Q5T619|ZN648_HUMAN Zinc finger protein 648 OS=Homo sapiens GN...    29   8.5  
sp|Q8N9K5|ZN565_HUMAN Zinc finger protein 565 OS=Homo sapiens GN...    29   8.5  
sp|P18712|ZG16_XENLA Gastrula zinc finger protein XlCGF16.1 (Fra...    29   8.5  
sp|Q96NJ6|ZFP3_HUMAN Zinc finger protein 3 homolog OS=Homo sapie...    29   8.5  
sp|Q9PSZ3|ADA11_XENLA ADAM 11 (Fragment) OS=Xenopus laevis GN=ad...    29   8.5  

>sp|P18728|ZG53_XENLA Gastrula zinc finger protein XlCGF53.1
           (Fragment) OS=Xenopus laevis PE=2 SV=1
          Length = 516

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -2

Query: 241 STCVQHFAPGA-FVQTRRSHSQMLG----FQRIHLSQSPFPLLAC*QTFAL*PCQPELQA 77
           S C +HF+  A   + +++HS  +G    + RIH  + PFP   C + FA      + Q+
Sbjct: 315 SECQKHFSTKAGLARHQKTHSVFVGEEHAYGRIHTEEKPFPCSECGKRFARRQHLTDHQS 374

Query: 76  DIHCKGPWPSSAC 38
               + P+  S C
Sbjct: 375 SHTGEKPYACSQC 387


>sp|Q8BWQ4|FTSJ1_MOUSE FtsJ methyltransferase domain-containing
           protein 1 OS=Mus musculus GN=Ftsjd1 PE=2 SV=1
          Length = 767

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 231 CSILRLELLFKPVVHIVRCLDFRESIFLSPPSHCLLVSRPLLCNLVSP 88
           C +   E +   ++ + +CL   +    S P  CLLV  P +C+L  P
Sbjct: 546 CPVFSEESVLSELLRLTKCLPDEQGAEPSGPVKCLLVGSPAVCDLQMP 593


>sp|Q96KM6|Z512B_HUMAN Zinc finger protein 512B OS=Homo sapiens
           GN=ZNF512B PE=1 SV=1
          Length = 892

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/94 (22%), Positives = 45/94 (47%)
 Frame = -3

Query: 342 PNELSRWVTLPRGLCRAQTMDFPPGMPFSSPVEVLHACSILRLELLFKPVVHIVRCLDFR 163
           P  +SR + + + +   + +     +P + PV V    ++ +L  + KPV  + + +   
Sbjct: 239 PVTVSRPMPVTKAMPVTKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVP-VTKPVTVS 297

Query: 162 ESIFLSPPSHCLLVSRPLLCNLVSPNCRLTFIAR 61
             I +S P   + VSRP+  +  +P C++  + R
Sbjct: 298 RPIVVSKP---VTVSRPIAISRHTPPCKMVLLTR 328


>sp|Q8TF72|SHRM3_HUMAN Protein Shroom3 OS=Homo sapiens GN=SHROOM3 PE=1
            SV=1
          Length = 1995

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 461  AYDSVVSNAAVQALYAHASTRRDAR-GCPSQGESLRISIDLPTSSHDGLRFPEGSA 297
            AY + + +A  + L A +  RRD   G P    S R     P+S+H GLR PE SA
Sbjct: 922  AYRNSIKDAQSRVLGATSFRRRDLELGAPVASRSWR---PRPSSAHVGLRSPEASA 974


>sp|Q60585|ZFP30_MOUSE Zinc finger protein 30 OS=Mus musculus
           GN=Zfp30 PE=2 SV=2
          Length = 533

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 193 RSHSQMLGFQRIHLSQSPFPLLAC*QTFAL*PCQPELQADIHCKGPWPSSACSDALCMHS 14
           R  SQ+   Q IH  + P+  + C +TF L     + Q+    + P+    C  A  +HS
Sbjct: 434 RLFSQLTQHQSIHFGEKPYKCMECEKTFRLLSQLTQHQSIHTGEKPYDCKECGKAFRLHS 493


>sp|Q4KMG0|CDON_HUMAN Cell adhesion molecule-related/down-regulated by
            oncogenes OS=Homo sapiens GN=CDON PE=1 SV=1
          Length = 1287

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -3

Query: 351  NRSPNELSRWVTL-----PRGLCRAQTMDFPPGMPFSSPVEVL 238
            + + N +  W  L     P G C  +TM  PPG+P  SP EVL
Sbjct: 1240 SETENNIVSWNALILPPVPEG-CAEKTMWSPPGIPLDSPTEVL 1281


>sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6
            OS=Homo sapiens GN=CARD6 PE=1 SV=2
          Length = 1037

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
 Frame = -2

Query: 424  HCMLTHPQEEMPGVAHHKEKVCAFQ*ISQRALTMGYASQRALQSSNYGLSTRHAFLFSRG 245
            H    HPQ   P  A  K +  + Q +  +  T G AS  ALQ  ++ +     F   + 
Sbjct: 890  HIGKPHPQSFQPAAATQKLRPASQQGVQMK--TQGGASNPALQIGSHPMCKSSQFKSDQS 947

Query: 244  SSTCVQHFAPGAF--VQTRRSHSQMLGFQRIHLSQSPFP 134
            + + V+H  P  F  V ++   SQ    Q       P P
Sbjct: 948  NPSTVKHSQPKPFHSVPSQPKSSQTKSCQSQPSQTKPSP 986


>sp|Q9Y2G7|ZFP30_HUMAN Zinc finger protein 30 homolog OS=Homo
           sapiens GN=ZFP30 PE=2 SV=1
          Length = 519

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -2

Query: 193 RSHSQMLGFQRIHLSQSPFPLLAC*QTFAL*PCQPELQADIHCKGPWPSSACSDALCMHS 14
           R  SQ+   Q IH  + PF    C +TF L     + Q+    + P+    C  A  +HS
Sbjct: 420 RLFSQLTQHQSIHFGEKPFKCKECEKTFRLLSQLTQHQSIHTGEKPYDCKECGKAFRLHS 479


>sp|O75290|Z780A_HUMAN Zinc finger protein 780A OS=Homo sapiens
           GN=ZNF780A PE=2 SV=3
          Length = 641

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 193 RSHSQMLGFQRIHLSQSPFPLLAC*QTFAL*PCQPELQADIH 68
           R H Q++  Q++H  + PF    C + F+L P Q     +IH
Sbjct: 595 RLHMQLIRHQKLHTGEKPFECKECGKVFSL-PTQLNRHKNIH 635


>sp|Q5T619|ZN648_HUMAN Zinc finger protein 648 OS=Homo sapiens
           GN=ZNF648 PE=1 SV=1
          Length = 568

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 184 SQMLGFQRIHLSQSPFPLLAC*QTFA 107
           S+++  QRIH  + PFP   C Q FA
Sbjct: 461 SRLVRHQRIHTGERPFPCTQCGQAFA 486
tr_hit_id B4EU95
Definition tr|B4EU95|B4EU95_PROMH Putative membrane-associated ammonia monooxygenase OS=Proteus mirabilis (strain HI4320)
Align length 89
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920572|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_F11.
         (461 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4EU95|B4EU95_PROMH Putative membrane-associated ammonia mono...    34   4.1  
tr|B3QZM1|B3QZM1_APPPP Cation transport ATPase, similar to MgtA ...    33   5.4  
tr|A2VRL5|A2VRL5_9BURK Alpha/beta hydrolase fold OS=Burkholderia...    33   7.0  
tr|O68387|O68387_MYCSY Phase-variable hemagglutinin OS=Mycoplasm...    33   9.2  
tr|B7AJ55|B7AJ55_9BACE Putative uncharacterized protein OS=Bacte...    33   9.2  
tr|B8BBH5|B8BBH5_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.2  

>tr|B4EU95|B4EU95_PROMH Putative membrane-associated ammonia
           monooxygenase OS=Proteus mirabilis (strain HI4320)
           GN=PMI0157 PE=4 SV=1
          Length = 346

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 25/89 (28%), Positives = 42/89 (47%)
 Frame = -3

Query: 273 PGMPFSSPVEVLHACSILRLELLFKPVVHIVRCLDFRESIFLSPPSHCLLVSRPLLCNLV 94
           PG+ F + +  L   S L + L+F P+V ++  + +R    LS P H L   +  L   V
Sbjct: 8   PGILFCALIGGLLTLSGLPMALMFGPIVVVI--IAYRFKWQLSVPKHTLTFIQLTLGTSV 65

Query: 93  SPNCRLTFIARVLGRVLLAVMLFVCIALQ 7
                   +      VLL ++L +C+A+Q
Sbjct: 66  GLMFNQVHLGSADNLVLLLIILVICLAIQ 94


>tr|B3QZM1|B3QZM1_APPPP Cation transport ATPase, similar to MgtA
            protein OS=Apple proliferation phytoplasma GN=ATP_00221
            PE=4 SV=1
          Length = 915

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = -3

Query: 210  LLFKPVVHIVRCLDFRESIFLSPPSHCLLVSRPLLCNLVSPNCRLTFIARVLGRVLL--- 40
            L    +VH +  ++FR+SIF+  PS+ L+      C L      LTF+  +L    L   
Sbjct: 825  LALSQLVHALNLINFRKSIFVVKPSNYLIKIFIFSCLLQFSTISLTFLKNILNLANLDFK 884

Query: 39   AVMLFVCIALQPV 1
              +L + ++L P+
Sbjct: 885  DFLLIIILSLTPL 897


>tr|A2VRL5|A2VRL5_9BURK Alpha/beta hydrolase fold OS=Burkholderia
           cenocepacia PC184 GN=BCPG_00591 PE=4 SV=1
          Length = 415

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -3

Query: 405 HKKRCPGLPITRRKFAHFNRSPNELSRWVTLPRGLCRAQTMDFPPGMPFSSPVEVLHACS 226
           H  R P     R+     +R P  L   VT PR +   +T    PG P +SP+ V+   S
Sbjct: 11  HVTRYPSSSTARK-----SRGPGVLRAVVTRPRRIAGRETAPLGPGCPRASPITVIAMLS 65

Query: 225 ILRL 214
           I ++
Sbjct: 66  ICKM 69


>tr|O68387|O68387_MYCSY Phase-variable hemagglutinin OS=Mycoplasma
           synoviae GN=vlhA PE=4 SV=1
          Length = 785

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +1

Query: 49  SAKDPCNECQPAIRADKVTKQRSANKQAMGRGTEKDGFS-EIQASDYVNDGFEQKLQAQN 225
           S  D       A+  D  T++ +  K   GR    DGF  +I   DYV DG++    A+N
Sbjct: 410 SLNDTLKAATDALNGDNPTEKTAYYKPVDGRTLYWDGFMPKIVIDDYVADGYDVANNAEN 469

Query: 226 AARM*NFHGRRERHAWWKVH 285
                    R     W+KV+
Sbjct: 470 NRAQHEAANRPLLEQWFKVN 489


>tr|B7AJ55|B7AJ55_9BACE Putative uncharacterized protein
           OS=Bacteroides eggerthii DSM 20697 GN=BACEGG_02445 PE=4
           SV=1
          Length = 320

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = -3

Query: 123 VSRPLLCNLVSPNCRLTFIARVLGRVLLAVMLFVCIALQPV 1
           V+R  L NL  P  +LTF A + G ++  V L  C ALQPV
Sbjct: 186 VNRSSLKNL--PTAKLTFYALLFGIIIYVVRLDFCTALQPV 224


>tr|B8BBH5|B8BBH5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28132 PE=4 SV=1
          Length = 353

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 251 GEEKGMPGGKSIV*ALQSPLGSVTHRESSLGDLLKCANFLLVMG 382
           GEE+G P  +  V  + + LGS   RE  + D + C  FLL +G
Sbjct: 67  GEEEGRPPARLSVARVAAGLGSGRRREPFVADRIGCDGFLLYLG 110