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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920579
Clone id YMU001_000138_G08
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGCACTTTGGGTGAAGTCGTGCCAATTTGTGTCCTTACAACCATGTCTTCAAACCGTCTT
TCTTTCCATTGATGCCTGCAACTAATTCTGTAATTCTACAAAATCCTGCTATGCTATGTT
TCAACAGATTGGGAGCTGGCTTTACCTTGATGGAGTTGCTGGGGATGTCAGTTTAAATTT
ATGCTATGTTAGGGATGTCCAAAACTAAAGCTGGATTAAAAGTGGAGATATGCAGCTCCA
TCAAATCGAGCTCCAGTAACTGTTGGATGTTGTCTATACAACTATTTAGAACCGACTGCT
TTCGACCGACTACTGCATGGAATCTGGAGCTCTGCAGCCCCATGGGTTTTCCCTAGCCCA
GTTCCACTGATCACGACACATCTCATCTATGCCATAGCGAGCCCTCCAATGGAGCTCCCT
TTCAACCTTCTCTGTAGAAGCATATACTTCACTGCTATCTCCAGCACGACGACCAATAAA
TTTA
■■Homology search results ■■ -
sp_hit_id Q43070
Definition sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum
Align length 49
Score (bit) 84.7
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920579|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_G08.
         (484 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=...    85   2e-16
sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis t...    84   3e-16
sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsi...    84   4e-16
sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsi...    81   2e-15
sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis t...    77   3e-14
sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis t...    77   3e-14
sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=...    54   4e-07
sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus ...    54   5e-07
sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovor...    54   5e-07
sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyce...    54   5e-07
sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=...    53   6e-07
sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=...    53   6e-07
sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosoph...    53   8e-07
sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtili...    52   1e-06
sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccha...    52   1e-06
sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen t...    52   1e-06
sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella mult...    50   5e-06
sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus infl...    50   5e-06
sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium di...    50   5e-06
sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haem...    49   1e-05
sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli...    49   1e-05
sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhi...    49   2e-05
sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi...    49   2e-05
sp|Q9SUN3|ARAE3_ARATH Putative UDP-arabinose 4-epimerase 3 OS=Ar...    46   1e-04
sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis ...    45   1e-04
sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Or...    44   3e-04
sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enteroc...    44   4e-04
sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyce...    43   7e-04
sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Or...    43   7e-04
sp|Q9Y7X5|YGRE_SCHPO Uncharacterized protein C365.14c OS=Schizos...    43   9e-04

>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum
           GN=GALE PE=2 SV=1
          Length = 350

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYAST K E+EL W+A+YG++EMCRDQWNWA+ NPWG
Sbjct: 297 KLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWG 345


>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis
           thaliana GN=At1g12780 PE=1 SV=2
          Length = 351

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR+GD++ VYASTEK E+EL W+A+YG+DEMCRDQW WA  NPWG
Sbjct: 298 KLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWG 346


>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis
           tetragonoloba PE=2 SV=1
          Length = 350

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -2

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           GRR GD+  VYAST K EREL+W+A+YGIDEMCRDQWNWA +NP+G
Sbjct: 296 GRRPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYG 341


>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis
           tetragonoloba PE=2 SV=1
          Length = 354

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 32/49 (65%), Positives = 39/49 (79%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++ VYASTEK E+EL W+A+YG++EMCRDQW WA  NPWG
Sbjct: 301 KMCPRRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWG 349


>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis
           thaliana GN=At4g23920 PE=2 SV=1
          Length = 350

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = -2

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           GRR GD+  VYASTEK EREL+W+A+ GI+EMCRD WNWA  NP+G
Sbjct: 295 GRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYG 340


>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis
           thaliana GN=At4g10960 PE=2 SV=3
          Length = 351

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = -2

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           GRR GD+  VYASTE+ E EL+W+A+YGI+EMCRD WNWA  NP+G
Sbjct: 296 GRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYG 341


>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens
           GN=GALE PE=1 SV=2
          Length = 348

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K + RR GD +  YA+    + EL W A  G+D MC D W W ++NP G
Sbjct: 295 KVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSG 343


>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus
           GN=Gale PE=2 SV=1
          Length = 347

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRA 328
           K + RR GD +  YA+      EL W A  G+D MC D W W ++NP G  A
Sbjct: 294 KVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGLGA 345


>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora
           GN=galE PE=3 SV=1
          Length = 337

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -2

Query: 471 RRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           RR GD +  +A     ++EL+WR   GIDEM RD WNW  +NP G
Sbjct: 291 RRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNWQSQNPQG 335


>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces
           cerevisiae GN=GAL10 PE=1 SV=2
          Length = 699

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K  GRRAGD   + A  ++ +REL W+    +++ C+D W W  ENP+G
Sbjct: 306 KVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFG 354
tr_hit_id A9SPG4
Definition tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 90.5
E-value 4.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920579|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_G08.
         (484 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella paten...    91   4e-17
tr|B8LKM2|B8LKM2_PICSI Putative uncharacterized protein OS=Picea...    90   6e-17
tr|Q9CAM5|Q9CAM5_ARATH Uridine diphosphate glucose epimerase, pu...    87   5e-16
tr|Q8LDN8|Q8LDN8_ARATH Uridine diphosphate glucose epimerase, pu...    87   5e-16
tr|Q1XG32|Q1XG32_9POAL UDP-galactose epimerase OS=Paspalum vagin...    86   7e-16
tr|B6TA76|B6TA76_MAIZE UDP-glucose 4-epimerase OS=Zea mays PE=2 ...    86   7e-16
tr|B4FU63|B4FU63_MAIZE Putative uncharacterized protein OS=Zea m...    86   7e-16
tr|B4FG89|B4FG89_MAIZE Putative uncharacterized protein OS=Zea m...    86   7e-16
tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medic...    86   1e-15
tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medic...    85   2e-15
tr|B0M3E8|B0M3E8_PEA UDP-galactose 4-epimerase (Fragment) OS=Pis...    85   2e-15
tr|A9TFR4|A9TFR4_PHYPA Predicted protein OS=Physcomitrella paten...    85   2e-15
tr|Q58IJ7|Q58IJ7_HORVU UDP-D-glucose epimerase 3 OS=Hordeum vulg...    84   5e-15
tr|A9PG00|A9PG00_POPTR Putative uncharacterized protein OS=Popul...    83   6e-15
tr|Q6XZA0|Q6XZA0_SOLTU UDP-glucose 4-epimerase OS=Solanum tubero...    83   8e-15
tr|Q9SGX0|Q9SGX0_ARATH F1N19.2 OS=Arabidopsis thaliana PE=3 SV=1       82   1e-14
tr|Q9C7W7|Q9C7W7_ARATH UDP-galactose 4-epimerase, putative; 6572...    82   1e-14
tr|Q8LNZ3|Q8LNZ3_ORYSJ Os05g0595100 protein OS=Oryza sativa subs...    82   1e-14
tr|Q6XP48|Q6XP48_SOLTU UDP-Glc-4-epimerase OS=Solanum tuberosum ...    82   1e-14
tr|A2Y861|A2Y861_ORYSI Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|A6MD13|A6MD13_9ORYZ UDP glucose-4 epimerase OS=Oryza brachyan...    80   4e-14
tr|B6TQ45|B6TQ45_MAIZE UDP-glucose 4-epimerase GEPI48 OS=Zea may...    80   7e-14
tr|A7QKH3|A7QKH3_VITVI Chromosome chr2 scaffold_112, whole genom...    80   7e-14
tr|A7QU91|A7QU91_VITVI Chromosome chr2 scaffold_176, whole genom...    79   8e-14
tr|A5BGY1|A5BGY1_VITVI Putative uncharacterized protein (Chromos...    79   8e-14
tr|Q8H0B7|Q8H0B7_ORYSJ Putative UDP-glucose 4-epimerase OS=Oryza...    79   1e-13
tr|Q652A8|Q652A8_ORYSJ Os09g0526700 protein OS=Oryza sativa subs...    79   1e-13
tr|Q58IJ5|Q58IJ5_HORVU UDP-D-glucose epimerase 2 OS=Hordeum vulg...    79   1e-13
tr|B8BDM3|B8BDM3_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|B8BDM2|B8BDM2_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13

>tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_187084 PE=3 SV=1
          Length = 384

 Score = 90.5 bits (223), Expect = 4e-17
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAPDSMQ*SV 304
           +F GRR GDSSEV+ASTEK E+EL WRA++GI EMCRDQWNWA+ NP+G R    ++ + 
Sbjct: 314 RFAGRRPGDSSEVFASTEKAEKELGWRAKFGIKEMCRDQWNWAKTNPYGYRGQQELEVTT 373

Query: 303 ESS 295
           + S
Sbjct: 374 QKS 376


>tr|B8LKM2|B8LKM2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 356

 Score = 89.7 bits (221), Expect = 6e-17
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAP 325
           KF  RR GD++ VYASTEK E EL W+A+YGI+EMCRDQWNWAR+NPWG  +P
Sbjct: 304 KFCPRRPGDATAVYASTEKAEHELGWKAKYGIEEMCRDQWNWARQNPWGYISP 356


>tr|Q9CAM5|Q9CAM5_ARATH Uridine diphosphate glucose epimerase,
           putative; 80611-78786 OS=Arabidopsis thaliana
           GN=F16M19.8 PE=3 SV=1
          Length = 353

 Score = 86.7 bits (213), Expect = 5e-16
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RRAGD++ VYAST+K E+EL W+A+YG+DEMCRDQWNWA +NPWG
Sbjct: 300 KLCPRRAGDATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWG 348


>tr|Q8LDN8|Q8LDN8_ARATH Uridine diphosphate glucose epimerase,
           putative (At1g63180) (Putative uridine diphosphate
           glucose epimerase) OS=Arabidopsis thaliana
           GN=At1g63180/F16M19_8 PE=2 SV=1
          Length = 351

 Score = 86.7 bits (213), Expect = 5e-16
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RRAGD++ VYAST+K E+EL W+A+YG+DEMCRDQWNWA +NPWG
Sbjct: 298 KLCPRRAGDATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWG 346


>tr|Q1XG32|Q1XG32_9POAL UDP-galactose epimerase OS=Paspalum
           vaginatum GN=PvUGE1 PE=2 SV=1
          Length = 364

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 309 KMCPRRPGDATEVYASTEKAERELGWRAQYGIEEMCRDQWNWAKKNPYG 357


>tr|B6TA76|B6TA76_MAIZE UDP-glucose 4-epimerase OS=Zea mays PE=2
           SV=1
          Length = 363

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 308 KLCPRRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 356


>tr|B4FU63|B4FU63_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 363

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 308 KLCPRRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 356


>tr|B4FG89|B4FG89_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 318

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYASTEK EREL WRA+YGI+EMCRDQWNWA++NP+G
Sbjct: 263 KLCPRRPGDATEVYASTEKAERELAWRAQYGIEEMCRDQWNWAKKNPYG 311


>tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 392

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = -2

Query: 474 GRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWGCRAPDS 319
           GRR GD+  VYAST+K EREL W+A+YGID MCRDQWNWA +NP+G  +PDS
Sbjct: 339 GRRPGDAEIVYASTKKAERELKWKAKYGIDGMCRDQWNWASKNPYGYGSPDS 390


>tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 350

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 32/49 (65%), Positives = 42/49 (85%)
 Frame = -2

Query: 483 KFIGRRAGDSSEVYASTEKVERELHWRARYGIDEMCRDQWNWARENPWG 337
           K   RR GD++EVYAST+K ++EL W+A+YG++EMCRDQWNWA+ NPWG
Sbjct: 297 KLCPRRPGDATEVYASTDKAQKELGWKAKYGVEEMCRDQWNWAKNNPWG 345