NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920583
Clone id YMU001_000138_H01
Library
Length 403
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAAAAAACATTTACTTAATATGTGATACCAAATTGGAGCATGTTTGAGTAGCAAGGTAC
TTATAAATTGTTGTGCACTATCGAGGAGCACTATAGCTCACATGAATAGCTGCATAGCTT
AATGACAAGTCATCTCAATGAAAATGCCATTCAATACAATTTAGAAGCCATGATCTTAGG
AGTTTCTGAGTATTCAGCATAGCATACAATGCAGAGAACTGAAATATGAAAAGAGGAGTG
GCATATTTGATGTACATACCTAAAGGATATTTTGCATCTGAAAATGTACATACCTGTGTG
TGCATGCGAAGAGAGCGATAATTGAAAGAGCCATAATTTGGGTCACGGTGTATGGCAAAC
AGAATTCTTGTTCCAGCTAGAGAGAGTTGTAACTAACAAACTC
■■Homology search results ■■ -
sp_hit_id Q89AY7
Definition sp|Q89AY7|Y081_BUCBP Uncharacterized protein bbp_081 OS=Buchnera aphidicola subsp. Baizongia pistaciae
Align length 46
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920583|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_H01.
         (403 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q89AY7|Y081_BUCBP Uncharacterized protein bbp_081 OS=Buchnera...    31   2.2  
sp|P97639|MCHR1_RAT Melanin-concentrating hormone receptor 1 (Fr...    30   4.8  
sp|Q9MZ01|MCHR1_PIG Melanin-concentrating hormone receptor 1 (Fr...    30   4.8  
sp|Q5IJ49|MCHR1_PANTR Melanin-concentrating hormone receptor 1 O...    30   4.8  
sp|Q8JZL2|MCHR1_MOUSE Melanin-concentrating hormone receptor 1 O...    30   4.8  
sp|Q8MJ89|MCHR1_MACMU Melanin-concentrating hormone receptor 1 (...    30   4.8  
sp|Q99705|MCHR1_HUMAN Melanin-concentrating hormone receptor 1 O...    30   4.8  
sp|P18747|ZO28_XENLA Oocyte zinc finger protein XlCOF28 (Fragmen...    29   6.3  
sp|Q8NGS7|O13C8_HUMAN Olfactory receptor 13C8 OS=Homo sapiens GN...    29   6.3  
sp|Q8NG78|OR8G5_HUMAN Olfactory receptor 8G5 OS=Homo sapiens GN=...    29   8.2  
sp|Q15614|OR8G2_HUMAN Olfactory receptor 8G2 OS=Homo sapiens GN=...    29   8.2  

>sp|Q89AY7|Y081_BUCBP Uncharacterized protein bbp_081 OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=bbp_081 PE=4
           SV=1
          Length = 717

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 358 LPYTVTQIMALSIIALFACTHRYVHFQMQNIL*VCTSNMPLLFSYF 221
           L +  T +++++    F  T+ Y  F  +N L  C   + +LF+YF
Sbjct: 182 LEFFKTDVVSINNFYCFDSTNNYCRFNSRNFLVCCRQYLKMLFNYF 227


>sp|P97639|MCHR1_RAT Melanin-concentrating hormone receptor 1
           (Fragment) OS=Rattus norvegicus GN=Mchr1 PE=2 SV=3
          Length = 360

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 274 VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 322


>sp|Q9MZ01|MCHR1_PIG Melanin-concentrating hormone receptor 1
           (Fragment) OS=Sus scrofa GN=MCHR1 PE=2 SV=1
          Length = 121

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 43  VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 91


>sp|Q5IJ49|MCHR1_PANTR Melanin-concentrating hormone receptor 1
           OS=Pan troglodytes GN=MCHR1 PE=2 SV=1
          Length = 422

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 336 VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 384


>sp|Q8JZL2|MCHR1_MOUSE Melanin-concentrating hormone receptor 1
           OS=Mus musculus GN=Mchr1 PE=2 SV=2
          Length = 423

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 337 VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 385


>sp|Q8MJ89|MCHR1_MACMU Melanin-concentrating hormone receptor 1
           (Fragment) OS=Macaca mulatta GN=MCHR1 PE=2 SV=2
          Length = 388

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 302 VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 350


>sp|Q99705|MCHR1_HUMAN Melanin-concentrating hormone receptor 1
           OS=Homo sapiens GN=MCHR1 PE=1 SV=2
          Length = 422

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -2

Query: 360 VCHTP*PKLWLFQLSLSSHAHTGMYIFRCKISFRYVHQICHSSFHISVLC 211
           VC  P   L L QLS+S    T +Y++   IS  Y +  C + F   VLC
Sbjct: 336 VCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANS-CLNPFVYIVLC 384


>sp|P18747|ZO28_XENLA Oocyte zinc finger protein XlCOF28 (Fragment)
           OS=Xenopus laevis PE=3 SV=1
          Length = 439

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
 Frame = -2

Query: 321 LSLSSHAHTGMYIFRC--------KISFRYVHQICHSSFHISVLCIVCYAEYSETPKIM 169
           LSL    HTG  IF+C        K S   VH+ CH       +C  C   Y++  K++
Sbjct: 21  LSLHQRTHTGEKIFKCTECEKSFMKRSQLIVHKKCHIE-ERPYMCTFCEKGYNQHSKLI 78


>sp|Q8NGS7|O13C8_HUMAN Olfactory receptor 13C8 OS=Homo sapiens
           GN=OR13C8 PE=2 SV=1
          Length = 320

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 309 SHAHTGMYIFRCKISFRYVHQICHSSFHISVL 214
           SH HT MY F C +SF     +C++S  + ++
Sbjct: 53  SHLHTPMYFFLCNLSFL---DVCYTSSSVPLI 81


>sp|Q8NG78|OR8G5_HUMAN Olfactory receptor 8G5 OS=Homo sapiens
           GN=OR8G5 PE=3 SV=1
          Length = 311

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 321 LSLSSHAHTGMYIFRCKISFRYVHQICHSS 232
           + LSSH HT MY F   +SF      CHS+
Sbjct: 49  IGLSSHLHTPMYCFLSSLSF---IDFCHST 75
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920583|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_H01.
         (403 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******