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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920588
Clone id YMU001_000138_H08
Library
Length 242
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000138_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCCCATTTACCTTGTTTGCGGGCTTCGTGTACCTTCTTGAGCTTGCTTGCTTTAATCTTG
AGTTGGTTTGTGGTCAATTCTTTGGCGATCCAAAGAGTTTTTTCCCTTGAGGAGGCGGGT
TTGGCATAGTAGCTTCATCCGTTCTTCTTTGTCCTTGAAGGTGAGGACACAATGTTTGGG
TGATACACGTCTATGCGTGTTGTTGATCTAAGAAATGGTTTCTGGCTTGATGTTGACAGG
TT
■■Homology search results ■■ -
sp_hit_id Q5AZC9
Definition sp|Q5AZC9|SNX41_EMENI Sorting nexin-41 OS=Emericella nidulans
Align length 60
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920588|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_H08.
         (242 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5AZC9|SNX41_EMENI Sorting nexin-41 OS=Emericella nidulans GN...    30   3.8  
sp|Q54EH2|RPAB1_DICDI DNA-directed RNA polymerases I, II, and II...    29   6.4  
sp|Q5XUC7|RL5_TOXCI 60S ribosomal protein L5 OS=Toxoptera citric...    29   6.4  
sp|Q6CKH5|DAD3_KLULA DASH complex subunit DAD3 OS=Kluyveromyces ...    29   8.4  

>sp|Q5AZC9|SNX41_EMENI Sorting nexin-41 OS=Emericella nidulans
           GN=snx41 PE=3 SV=1
          Length = 615

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP ++  P   K +   Y AKP  ++E    I  +L    L +  ++ +++ E R+ G W
Sbjct: 142 HPTLIVPPIPEKHSMADYAAKPTKAKEDAGII--DLRKRMLAVFLNRCRRMKEIREDGVW 199


>sp|Q54EH2|RPAB1_DICDI DNA-directed RNA polymerases I, II, and III
           subunit rpabc1 OS=Dictyostelium discoideum GN=polr2e
           PE=3 SV=2
          Length = 197

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = -3

Query: 207 INNTHRRVSPKHCVLTFKDKEERMKLLCQTRL 112
           +N TH ++ PKH +LT   KEE+++LL + ++
Sbjct: 124 VNITHHQLVPKHILLT---KEEKLELLTRYKM 152


>sp|Q5XUC7|RL5_TOXCI 60S ribosomal protein L5 OS=Toxoptera citricida
           GN=RpL5 PE=2 SV=1
          Length = 300

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGK 6
           H NI S P R +K       K   S+E   W AK+LT  + K +  + K  +    QG+
Sbjct: 244 HENIRSDPKRDRK------PKKDVSKEPKRWNAKKLTNAERKQRVVEAKAAYLKELQGE 296


>sp|Q6CKH5|DAD3_KLULA DASH complex subunit DAD3 OS=Kluyveromyces
           lactis GN=DAD3 PE=3 SV=1
          Length = 85

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = -3

Query: 222 ETIS*INNTHRRVSPKHCVLTFKDKEERMKLLCQTRLLKGK--NSLDRQRIDHK 67
           ET+S +NNTH    P+  +   ++ E ++ L+  + LLKG   + + ++R+DH+
Sbjct: 28  ETLSDLNNTHEDSKPEAILQEMREIEVKISLV--STLLKGSVYSLVIQRRMDHQ 79
tr_hit_id Q6W7F5
Definition tr|Q6W7F5|Q6W7F5_ANAPH P44-62 (Fragment) OS=Anaplasma phagocytophilum
Align length 53
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920588|Adiantum capillus-veneris mRNA, clone:
YMU001_000138_H08.
         (242 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6W7F5|Q6W7F5_ANAPH P44-62 (Fragment) OS=Anaplasma phagocytop...    36   1.1  
tr|Q2UI75|Q2UI75_ASPOR Membrane coat complex Retromer OS=Aspergi...    34   3.1  
tr|B8N802|B8N802_ASPFL Autophagy protein Atg20, putative OS=Aspe...    34   3.1  
tr|A8XLL4|A8XLL4_CAEBR CBR-PTL-1 protein OS=Caenorhabditis brigg...    34   4.1  
tr|Q0CY28|Q0CY28_ASPTN Sorting nexin-41 OS=Aspergillus terreus (...    34   4.1  
tr|O85039|O85039_ANAPH Granulocytic ehrlichiosis antigen OS=Anap...    33   5.4  
tr|B8M7S4|B8M7S4_9EURO Autophagy protein Atg20, putative OS=Tala...    33   5.4  
tr|A2QBV9|A2QBV9_ASPNC Similarity to hypothetical protein SPBC14...    33   5.4  
tr|A1C7D9|A1C7D9_ASPCL Autophagy protein Atg20, putative OS=Aspe...    33   5.4  
tr|Q6Y7G5|Q6Y7G5_ANAPH P44 paralog (Fragment) OS=Anaplasma phago...    33   7.0  
tr|B6Q507|B6Q507_PENMA Autophagy protein Atg20, putative OS=Peni...    33   9.1  

>tr|Q6W7F5|Q6W7F5_ANAPH P44-62 (Fragment) OS=Anaplasma
           phagocytophilum PE=2 SV=1
          Length = 172

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -1

Query: 239 LSTSSQKPFLRSTTRIDVYHPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAK 81
           L+ +S K F++    + V HP+I     +TKKNG S Y+K AS    +   AK
Sbjct: 13  LAKTSGKDFVQFAKAVGVSHPSIDGKVCKTKKNGGSRYSKYASETANSSGAAK 65


>tr|Q2UI75|Q2UI75_ASPOR Membrane coat complex Retromer
           OS=Aspergillus oryzae GN=AO090023000164 PE=4 SV=1
          Length = 634

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP ++  P   K     Y AKP  ++E T  I  EL    L +  ++ +++ E R+ G W
Sbjct: 146 HPTLIIPPIPEKHTMADYAAKPTKAKEDTAII--ELRKRMLAVFLNRCRRMKEVREDGVW 203


>tr|B8N802|B8N802_ASPFL Autophagy protein Atg20, putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_105960 PE=4 SV=1
          Length = 634

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP ++  P   K     Y AKP  ++E T  I  EL    L +  ++ +++ E R+ G W
Sbjct: 146 HPTLIIPPIPEKHTMADYAAKPTKAKEDTAII--ELRKRMLAVFLNRCRRMKEVREDGVW 203


>tr|A8XLL4|A8XLL4_CAEBR CBR-PTL-1 protein OS=Caenorhabditis briggsae
           GN=Cbr-ptl-1 PE=4 SV=2
          Length = 447

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 139 DEATMPNPP--PQGKKLFGSPKN*PQTNSRLKQASSRRYTKP 20
           +EAT+P+PP  P GK     P+N P     LKQ    + T P
Sbjct: 87  EEATIPSPPSEPTGKSCTPQPENSPVEEQILKQVQEEKITSP 128


>tr|Q0CY28|Q0CY28_ASPTN Sorting nexin-41 OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_01406 PE=4 SV=1
          Length = 587

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP ++  P   K     Y AKP  ++E T  I  EL    L +  ++ +++ E R+ G W
Sbjct: 146 HPTLIIPPIPEKHTMADYAAKPTKAKEDTAII--ELRKRMLAVFLNRCRQMKEVREDGVW 203


>tr|O85039|O85039_ANAPH Granulocytic ehrlichiosis antigen
           OS=Anaplasma phagocytophilum GN=hge-44 PE=4 SV=1
          Length = 438

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -1

Query: 239 LSTSSQKPFLRSTTRIDVYHPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAK 81
           L+ +S K  ++    +++  PNI     RTKKNG S Y+K AS    +   AK
Sbjct: 168 LAKTSGKDIVQFAKAVEISSPNIEKKVCRTKKNGGSRYSKYASETANSSDAAK 220


>tr|B8M7S4|B8M7S4_9EURO Autophagy protein Atg20, putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_030680 PE=4
           SV=1
          Length = 636

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP ++  P   K     Y AKP  ++E +  I  EL    L +  ++ +K+ E R+ G W
Sbjct: 143 HPTLIIPPIPEKHTMADYAAKPTKAKEDSAII--ELRKRMLGVFLNRCRKMKEVREDGVW 200


>tr|A2QBV9|A2QBV9_ASPNC Similarity to hypothetical protein
           SPBC14F5.11c - Schizosaccharomyces pombe OS=Aspergillus
           niger (strain CBS 513.88 / FGSC A1513) GN=An02g01390
           PE=4 SV=1
          Length = 631

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP +V  P   K     Y AKP  ++E T  I  +L    L +  ++ +++ E R+ G W
Sbjct: 146 HPTLVIPPIPEKHTMADYAAKPTKAKEDTAII--DLRKRMLAVFLNRCRRMKEVREDGVW 203


>tr|A1C7D9|A1C7D9_ASPCL Autophagy protein Atg20, putative
           OS=Aspergillus clavatus GN=ACLA_073450 PE=4 SV=1
          Length = 635

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 182 HPNIVSSPSRTKKNG*SYYAKPASSREKTLWIAKELTTNQLKIKASKLKKVHEARKQGKW 3
           HP +V  P   K     Y AKP  ++E T  I  +L    L +  ++ +++ E R+ G W
Sbjct: 146 HPTLVIPPIPEKHTMADYAAKPTKAKEDTAII--DLRKRMLAVFLNRCRRMKEVREDGVW 203


>tr|Q6Y7G5|Q6Y7G5_ANAPH P44 paralog (Fragment) OS=Anaplasma
           phagocytophilum PE=4 SV=1
          Length = 183

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -1

Query: 239 LSTSSQKPFLRSTTRIDVYHPNIVSSPSRTKKNG*SYYAKPA 114
           L+ +S K F++    + V HPNI S    TKKNG + YA+ A
Sbjct: 20  LAKTSGKDFVQFAKAVGVSHPNIDSKVCVTKKNGSNKYAQYA 61