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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920598
Clone id YMU001_000139_A11
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCGCCAATGGACCTCAATATGCTTGACTTCCCACCTCCATTTGGGCCAGTAAGAAGATGC
AGTGAGCTCATTCTTACAGAGTTGGACACCACTACGCTATTTGCCTTGTCTGCCCAATAT
GGTATCAGATCTTCCATCACCAGTCTTATCTTTCCTCCTTGAGAACCACCATCGCAGGGT
TGCTGTCATAAGTTCCATCTTTTGCGGTCATGTGTCAATAGTTCTTCATCATCATCATTT
ACAAGCTCTGGAAAAGTCCAGTCCCTACGTGTCCCTTCACTCACATGAGCAAAAAGAGTC
TTTGCAATAACTGCCAATACAGAAGTAAACACGATAGTGTTCAATCTCCCTTTCAATTCT
TCAGCTAGATTCCTAAAAATTTCATATACCCTGCTAGACGCACTCAGCACTGCAGTCCGG
TATCGTTCAAGTGCTGACTCAACTGATACTGTCGAATACAAATCATCTTTGACTCTTTTA
CACTTGGCATCTTGTGCA
■■Homology search results ■■ -
sp_hit_id Q8RFK2
Definition sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobacterium nucleatum subsp. nucleatum
Align length 148
Score (bit) 39.7
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920598|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_A11.
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobac...    40   0.008
sp|P70755|MUTS_AQUPY DNA mismatch repair protein mutS OS=Aquifex...    35   0.25 
sp|O66652|MUTS_AQUAE DNA mismatch repair protein mutS OS=Aquifex...    33   0.56 
sp|Q9VUM0|MSH6_DROME Probable DNA mismatch repair protein Msh6 O...    33   0.95 
sp|A1KV25|GPMA_NEIMF 2,3-bisphosphoglycerate-dependent phosphogl...    33   0.95 
sp|Q9JYF7|GPMA_NEIMB 2,3-bisphosphoglycerate-dependent phosphogl...    33   0.95 
sp|A9M1A2|GPMA_NEIM0 2,3-bisphosphoglycerate-dependent phosphogl...    33   0.95 
sp|Q9JTF2|GPMA_NEIMA 2,3-bisphosphoglycerate-dependent phosphogl...    32   1.6  
sp|Q73XU8|CYSA_MYCPA Sulfate/thiosulfate import ATP-binding prot...    32   1.6  
sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1...    32   2.1  
sp|Q5FQN4|CCMA_GLUOX Cytochrome c biogenesis ATP-binding export ...    32   2.1  
sp|Q7VLS9|ZNUC_HAEDU Zinc import ATP-binding protein znuC OS=Hae...    31   3.6  
sp|A4R0R0|MSH3_MAGGR DNA mismatch repair protein MSH3 OS=Magnapo...    31   3.6  
sp|Q38Z74|GPMA2_LACSS 2,3-bisphosphoglycerate-dependent phosphog...    31   3.6  
sp|Q81A25|MUTS_BACCR DNA mismatch repair protein mutS OS=Bacillu...    30   4.7  
sp|P43248|MSH2_DROME DNA mismatch repair protein spellchecker 1 ...    30   4.7  
sp|Q5F7C0|GPMA_NEIG1 2,3-bisphosphoglycerate-dependent phosphogl...    30   4.7  
sp|Q73HX8|CCMA_WOLPM Cytochrome c biogenesis ATP-binding export ...    30   4.7  
sp|P17930|VP87_NPVOP Capsid protein p87 OS=Orgyia pseudotsugata ...    30   6.1  
sp|P54275|MSH2_RAT DNA mismatch repair protein Msh2 OS=Rattus no...    30   6.1  
sp|P43247|MSH2_MOUSE DNA mismatch repair protein Msh2 OS=Mus mus...    30   6.1  
sp|P43246|MSH2_HUMAN DNA mismatch repair protein Msh2 OS=Homo sa...    30   6.1  
sp|Q5XXB5|MSH2_CERAE DNA mismatch repair protein Msh2 OS=Cercopi...    30   6.1  
sp|Q3MHE4|MSH2_BOVIN DNA mismatch repair protein Msh2 OS=Bos tau...    30   6.1  
sp|A0AKV8|GPMA_LISW6 2,3-bisphosphoglycerate-dependent phosphogl...    30   6.1  
sp|Q8Y571|GPMA_LISMO 2,3-bisphosphoglycerate-dependent phosphogl...    30   6.1  
sp|Q71XG0|GPMA_LISMF 2,3-bisphosphoglycerate-dependent phosphogl...    30   6.1  
sp|Q929G8|GPMA_LISIN 2,3-bisphosphoglycerate-dependent phosphogl...    30   6.1  
sp|Q6DD06|ZC3HF_XENLA Zinc finger CCCH domain-containing protein...    30   8.0  
sp|Q38YC2|PSTB1_LACSS Phosphate import ATP-binding protein pstB ...    30   8.0  

>sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS
           OS=Fusobacterium nucleatum subsp. nucleatum GN=mutS PE=3
           SV=1
          Length = 896

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
 Frame = -2

Query: 431 LERYRTAVLSASSRV----YEIFRNLAEELKGRLNTI--VFTSVLAVIAKTLFAHVSEGT 270
           L+ Y   V++A S++    YE+F+ L  E+KG ++++  +   +  +   + FAH++  T
Sbjct: 529 LKEYEEKVITAKSKIEALEYELFKQLTSEIKGHIDSLYKLANRIANLDIVSNFAHIA--T 586

Query: 269 RRDWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADKAXXXX 90
           +  +  PE+ + D  E+                   +GG+   ++E LIP          
Sbjct: 587 KNSYVKPEIGDGDILEI-------------------KGGR-HPIVESLIP---SGTYVKN 623

Query: 89  XXXXXXXXSLHLLTGPNGGGKSSILRSI 6
                   +L +LTGPN  GKS+ ++ +
Sbjct: 624 DIILDDKNNLIILTGPNMSGKSTYMKQV 651


>sp|P70755|MUTS_AQUPY DNA mismatch repair protein mutS OS=Aquifex
           pyrophilus GN=mutS PE=3 SV=1
          Length = 855

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 4/147 (2%)
 Frame = -2

Query: 431 LERYRTAVLSASSRV----YEIFRNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSEGTRR 264
           L+R    +LSA +R+    YE++R L EE+   L+ +   + L      + +       +
Sbjct: 500 LQRLEEKILSAQTRINELEYELYRELREEVVKELDKVGNNATLIGEVDYIQSLAWLALEK 559

Query: 263 DWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADKAXXXXXX 84
            W  PE+   +  EL+  + K                    V+E+       K       
Sbjct: 560 GWVKPEV--HEGYELIIEEGKH------------------PVIEEFT-----KNYVPNDT 594

Query: 83  XXXXXXSLHLLTGPNGGGKSSILRSIG 3
                  +H++TGPN  GKSS +R +G
Sbjct: 595 KLTEEEFIHVITGPNMAGKSSYIRQVG 621


>sp|O66652|MUTS_AQUAE DNA mismatch repair protein mutS OS=Aquifex
           aeolicus GN=mutS PE=3 SV=1
          Length = 859

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)
 Frame = -2

Query: 431 LERYRTAVLSASSRV----YEIFRNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSEGTRR 264
           L+R    +LSA +R+    YE+++ L E +   L+ +   +        + +       +
Sbjct: 500 LQRLEEKILSAQTRINDLEYELYKELRERVVKELDKVGNNASAVAEVDFIQSLAQIAYEK 559

Query: 263 DWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADKAXXXXXX 84
           DW  P++   +  EL+  + +                 I   +E+ +P            
Sbjct: 560 DWAKPQI--HEGYELIIEEGRH--------------PVIEEFVENYVP---------NDT 594

Query: 83  XXXXXXSLHLLTGPNGGGKSSILRSIG 3
                  +H++TGPN  GKSS +R +G
Sbjct: 595 KLDRDSFIHVITGPNMAGKSSYIRQVG 621


>sp|Q9VUM0|MSH6_DROME Probable DNA mismatch repair protein Msh6
            OS=Drosophila melanogaster GN=Msh6 PE=1 SV=2
          Length = 1190

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 34/130 (26%), Positives = 54/130 (41%)
 Frame = -2

Query: 392  RVYEIFRNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSEGTRRDWTFPELVNDDDEELLT 213
            R++E F N  ++ K  ++ +    VL  +A+        G +     PELV+D D+  + 
Sbjct: 871  RLFEKFSNHYDQWKQCIDCVANLDVLGSLAEYA------GQQMVICVPELVSDADQPFIQ 924

Query: 212  HDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGG 33
             +         PC   S       +   L    A +A             L LLTGPN G
Sbjct: 925  LEEG-----YHPCANAST-----YIPNGLELGTASEAP------------LSLLTGPNMG 962

Query: 32   GKSSILRSIG 3
            GKS+++R +G
Sbjct: 963  GKSTLMREVG 972


>sp|A1KV25|GPMA_NEIMF 2,3-bisphosphoglycerate-dependent
           phosphoglycerate mutase OS=Neisseria meningitidis
           serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
           GN=gpmA PE=3 SV=1
          Length = 227

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 257 TFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADK 105
           T P L++ DDE     DR+  +L   P D    G  +++ +E ++P+W D+
Sbjct: 118 TLPPLLDKDDEFSAHKDRRYAHL---PADVVPDGENLKVTLERVLPFWEDQ 165


>sp|Q9JYF7|GPMA_NEIMB 2,3-bisphosphoglycerate-dependent
           phosphoglycerate mutase OS=Neisseria meningitidis
           serogroup B GN=gpmA PE=3 SV=1
          Length = 227

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 257 TFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADK 105
           T P L++ DDE     DR+  +L   P D    G  +++ +E ++P+W D+
Sbjct: 118 TLPPLLDKDDEFSAHKDRRYAHL---PADVVPDGENLKVTLERVLPFWEDQ 165


>sp|A9M1A2|GPMA_NEIM0 2,3-bisphosphoglycerate-dependent
           phosphoglycerate mutase OS=Neisseria meningitidis
           serogroup C (strain 053442) GN=gpmA PE=3 SV=1
          Length = 227

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 257 TFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADK 105
           T P L++ DDE     DR+  +L   P D    G  +++ +E ++P+W D+
Sbjct: 118 TLPPLLDKDDEFSAHKDRRYAHL---PADVVPDGENLKVTLERVLPFWEDQ 165


>sp|Q9JTF2|GPMA_NEIMA 2,3-bisphosphoglycerate-dependent
           phosphoglycerate mutase OS=Neisseria meningitidis
           serogroup A GN=gpmA PE=3 SV=1
          Length = 227

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 257 TFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLVMEDLIPYWADK 105
           T P L++ DDE     DR+  +L   P D    G  +++ +E ++P+W D+
Sbjct: 118 TLPPLLDKDDEFSAHKDRRYAHL---PADVIPDGENLQVTLERVLPFWEDQ 165


>sp|Q73XU8|CYSA_MYCPA Sulfate/thiosulfate import ATP-binding protein
           cysA OS=Mycobacterium paratuberculosis GN=cysA PE=3 SV=1
          Length = 362

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 173 DGGSQGGKIRLVMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
           D G+  G I + + D    + D              SL  L GP+G GKS++LR+I
Sbjct: 3   DAGTDRGDIAITVRDAYKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTI 58


>sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A
           PE=2 SV=1
          Length = 719

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -2

Query: 470 KDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEEL-KGRLNTIVFTSVLAVIAKTL 294
           K+     +  E  LER ++ +L    R+ E+FRN+   L KG+++  +F S   +  + +
Sbjct: 151 KNQSLDKIRPEKELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEGEISCEDI 210

Query: 293 F 291
           F
Sbjct: 211 F 211
tr_hit_id A7NXJ8
Definition tr|A7NXJ8|A7NXJ8_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera
Align length 164
Score (bit) 117.0
E-value 2.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920598|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_A11.
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NXJ8|A7NXJ8_VITVI Chromosome chr5 scaffold_2, whole genome ...   117   2e-25
tr|Q1XBQ6|Q1XBQ6_SOLLC DNA mismatch repair protein (Fragment) OS...   116   7e-25
tr|Q9LK12|Q9LK12_ARATH Similarity to mismatch repair protein Mut...   114   3e-24
tr|Q84LK0|Q84LK0_ARATH DNA mismatch repair protein OS=Arabidopsi...   114   3e-24
tr|A9TFV9|A9TFV9_PHYPA Predicted protein OS=Physcomitrella paten...   112   7e-24
tr|Q1XBQ8|Q1XBQ8_SOYBN DNA mismatch repair protein OS=Glycine ma...   109   8e-23
tr|Q2TMH4|Q2TMH4_PHAVU DNA mismatch repair protein OS=Phaseolus ...   107   4e-22
tr|Q1WK36|Q1WK36_PHAVU DNA mismatch repair protein OS=Phaseolus ...   107   4e-22
tr|Q7X8P0|Q7X8P0_ORYSJ OSJNBa0043L24.4 protein OS=Oryza sativa s...   102   1e-20
tr|Q7F953|Q7F953_ORYSA OSJNBb0002J11.12 protein OS=Oryza sativa ...   102   1e-20
tr|Q0JBW2|Q0JBW2_ORYSJ Os04g0507000 protein OS=Oryza sativa subs...   102   1e-20
tr|B8ARR0|B8ARR0_ORYSI Putative uncharacterized protein OS=Oryza...   102   1e-20
tr|A3AVE7|A3AVE7_ORYSJ Putative uncharacterized protein OS=Oryza...   102   1e-20
tr|Q1XBQ7|Q1XBQ7_MAIZE DNA mismatch repair protein OS=Zea mays G...   100   7e-20
tr|Q01IV6|Q01IV6_ORYSA OSIGBa0157A06.3 protein OS=Oryza sativa G...    97   3e-19
tr|Q01C10|Q01C10_OSTTA DNA mismatch repair MutS family (ISS) OS=...    70   6e-11
tr|B3U2A3|B3U2A3_CUCSA DNA mismatch repair protein OS=Cucumis sa...    70   7e-11
tr|A4RV40|A4RV40_OSTLU Predicted protein OS=Ostreococcus lucimar...    67   5e-10
tr|B8CFM5|B8CFM5_THAPS Mismatch repair protein MutS (Fragment) O...    42   0.012
tr|B7FRE1|B7FRE1_PHATR Predicted protein OS=Phaeodactylum tricor...    39   0.18 
tr|A7AS93|A7AS93_BABBO DNA mismatch repair protein, putative OS=...    37   0.52 
tr|Q469N6|Q469N6_METBF Putative uncharacterized protein OS=Metha...    36   1.2  
tr|A8B9I8|A8B9I8_GIALA Protein 21.1 OS=Giardia lamblia ATCC 5080...    35   2.0  
tr|Q7PG88|Q7PG88_ANOGA AGAP000650-PA (Fragment) OS=Anopheles gam...    35   2.6  
tr|Q8KRR2|Q8KRR2_FUSNU DNA mismatch repair protein OS=Fusobacter...    34   3.4  
tr|B7DKR3|B7DKR3_DESSA ABC transporter related protein OS=Desulf...    34   3.4  
tr|A5TW56|A5TW56_FUSNP DNA mismatch repair protein MutS OS=Fusob...    34   3.4  
tr|Q6LI01|Q6LI01_PHOPR Putative putative ATP-binding component o...    34   4.4  
tr|A8TA15|A8TA15_9VIBR Putative ATP-binding component of ABC tra...    34   4.4  
tr|A7JZ04|A7JZ04_9VIBR ABC-type Mn/Zn transport systems, ATPase ...    34   4.4  

>tr|A7NXJ8|A7NXJ8_VITVI Chromosome chr5 scaffold_2, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00020365001
            PE=3 SV=1
          Length = 1122

 Score =  117 bits (294), Expect = 2e-25
 Identities = 73/164 (44%), Positives = 93/164 (56%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K ++V  + ++TV VE AL RY  A   A +RV E+ R L+ EL+ ++N ++F S+
Sbjct: 633  AIDSKGRKVGLEWFTTVKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASM 692

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLV 138
            L VIAK LFAHVSEG RR W FP LV         H  K      +P DG +      + 
Sbjct: 693  LLVIAKALFAHVSEGRRRKWVFPSLVE-------LHRSKD----MEPLDGANW-----MK 736

Query: 137  MEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
            +  L PYW D A            SL LLTGPNGGGKSS+LRSI
Sbjct: 737  ITGLSPYWLDVAQGSAVHNTVDMKSLFLLTGPNGGGKSSLLRSI 780


>tr|Q1XBQ6|Q1XBQ6_SOLLC DNA mismatch repair protein (Fragment)
            OS=Solanum lycopersicum GN=MSH1 PE=2 SV=1
          Length = 1124

 Score =  116 bits (290), Expect = 7e-25
 Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K K+V ++ ++T+ VE A+ RY  A   A SRV E+ R L+ EL  ++N ++F SV
Sbjct: 628  ALDSKGKKVGEEWFTTMRVEDAIARYHEASAKAKSRVLELLRGLSSELLSKINILIFASV 687

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVN----DDDEELLTHDRKRWNL*QQPCDGGSQGGK 150
            L VIAK+LF+HVSEG RR+W FP +       D E L                 G+ G K
Sbjct: 688  LNVIAKSLFSHVSEGRRRNWIFPTITQFNKCQDTEAL----------------NGTDGMK 731

Query: 149  IRLVMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
            I      L PYW D A            S+ LLTGPNGGGKSS+LRS+
Sbjct: 732  I----IGLSPYWFDAARGTGVQNTVDMQSMFLLTGPNGGGKSSLLRSL 775


>tr|Q9LK12|Q9LK12_ARATH Similarity to mismatch repair protein MutS
           OS=Arabidopsis thaliana PE=3 SV=1
          Length = 1016

 Score =  114 bits (284), Expect = 3e-24
 Identities = 69/164 (42%), Positives = 93/164 (56%)
 Frame = -2

Query: 497 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
           A D+K K+V ++ ++T  VE AL RY  A  +A +RV E+ R L+ +L+ ++N +VF S+
Sbjct: 532 ALDSKGKKVGEEWFTTPKVEIALVRYHEASENAKARVLELLRELSVKLQTKINVLVFASM 591

Query: 317 LAVIAKTLFAHVSEGTRRDWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLV 138
           L VI+K LF+H  EG RR W FP LV    +E             +P DG S     R+ 
Sbjct: 592 LLVISKALFSHACEGRRRKWVFPTLVGFSLDE-----------GAKPLDGAS-----RMK 635

Query: 137 MEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
           +  L PYW D +            SL LLTGPNGGGKSS+LRSI
Sbjct: 636 LTGLSPYWFDVSSGTAVHNTVDMQSLFLLTGPNGGGKSSLLRSI 679


>tr|Q84LK0|Q84LK0_ARATH DNA mismatch repair protein OS=Arabidopsis
            thaliana GN=MSH1 PE=2 SV=1
          Length = 1118

 Score =  114 bits (284), Expect = 3e-24
 Identities = 69/164 (42%), Positives = 93/164 (56%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K K+V ++ ++T  VE AL RY  A  +A +RV E+ R L+ +L+ ++N +VF S+
Sbjct: 634  ALDSKGKKVGEEWFTTPKVEIALVRYHEASENAKARVLELLRELSVKLQTKINVLVFASM 693

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLV 138
            L VI+K LF+H  EG RR W FP LV    +E             +P DG S     R+ 
Sbjct: 694  LLVISKALFSHACEGRRRKWVFPTLVGFSLDE-----------GAKPLDGAS-----RMK 737

Query: 137  MEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
            +  L PYW D +            SL LLTGPNGGGKSS+LRSI
Sbjct: 738  LTGLSPYWFDVSSGTAVHNTVDMQSLFLLTGPNGGGKSSLLRSI 781


>tr|A9TFV9|A9TFV9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_144992 PE=3 SV=1
          Length = 862

 Score =  112 bits (281), Expect = 7e-24
 Identities = 63/164 (38%), Positives = 94/164 (57%)
 Frame = -2

Query: 497 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
           A DAK K+V ++ ++T  VES+L +YR AV  A+ R+ E+ R ++E+L+ ++  ++F S 
Sbjct: 529 AVDAKGKKVGEEWWTTSKVESSLGKYRAAVDKANVRILELLRAISEDLQPKIEVLIFVST 588

Query: 317 LAVIAKTLFAHVSEGTRRDWTFPELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKIRLV 138
           L++IAKTL  HV+EG+RR+W  P L + + +                           +V
Sbjct: 589 LSIIAKTLNLHVTEGSRRNWAVPTLSSTERQ---------------------------MV 621

Query: 137 MEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
           + DL+PYW D A            S+ LLTGPNGGGKSS+LRSI
Sbjct: 622 LADLVPYWNDLAHEKVQPNLVDMKSMFLLTGPNGGGKSSMLRSI 665


>tr|Q1XBQ8|Q1XBQ8_SOYBN DNA mismatch repair protein OS=Glycine max
            GN=MSH1 PE=2 SV=1
          Length = 1130

 Score =  109 bits (272), Expect = 8e-23
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K ++V ++ ++T  VE+AL RY  A   A  RV EI R LA EL+  +N +VF+S+
Sbjct: 635  ALDSKGRKVGEEWFTTPKVEAALTRYHEANAKAKERVLEILRGLAAELQYSINILVFSSM 694

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVNDDD-EELLTHDRKRWNL*QQPCDGGSQGGKIRL 141
            L VIAK LFAH SEG RR W FP LV     E++ + D+             + G KI  
Sbjct: 695  LLVIAKALFAHASEGRRRRWVFPTLVESHGFEDVKSLDK-------------THGMKI-- 739

Query: 140  VMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
                L+PYW   A            SL LLTGPNGGGKSS LRSI
Sbjct: 740  --SGLLPYWFHIA-EGVVRNDVDMQSLFLLTGPNGGGKSSFLRSI 781


>tr|Q2TMH4|Q2TMH4_PHAVU DNA mismatch repair protein OS=Phaseolus
            vulgaris PE=2 SV=1
          Length = 1126

 Score =  107 bits (266), Expect = 4e-22
 Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K KRV ++ ++T  VE+AL RY  A   A+ RV EI R LA EL   +N +VF+S 
Sbjct: 636  ALDSKGKRVGEEWFTTPKVEAALTRYHEANAKATERVLEILRELATELHYSINILVFSST 695

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVNDDD-EELLTHDRKRWNL*QQPCDGGSQGGKIRL 141
            L VI K LFAH SEG RR W FP L   +  E++ + D+               G KI  
Sbjct: 696  LLVITKALFAHASEGRRRRWVFPTLAESNGFEDVKSSDK-------------IHGMKI-- 740

Query: 140  VMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
                L PYW   A            SL LLTGPNGGGKSS+LRSI
Sbjct: 741  --VGLAPYWFHIA-EGIVRNDVDMQSLFLLTGPNGGGKSSLLRSI 782


>tr|Q1WK36|Q1WK36_PHAVU DNA mismatch repair protein OS=Phaseolus
            vulgaris GN=Msh1 PE=3 SV=1
          Length = 1126

 Score =  107 bits (266), Expect = 4e-22
 Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
 Frame = -2

Query: 497  AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
            A D+K KRV ++ ++T  VE+AL RY  A   A+ RV EI R LA EL   +N +VF+S 
Sbjct: 636  ALDSKGKRVGEEWFTTPKVEAALTRYHEANAKATERVLEILRGLATELHYSINILVFSST 695

Query: 317  LAVIAKTLFAHVSEGTRRDWTFPELVNDDD-EELLTHDRKRWNL*QQPCDGGSQGGKIRL 141
            L VI K LFAH SEG RR W FP L   +  E++ + D+               G KI  
Sbjct: 696  LLVITKALFAHASEGRRRRWVFPTLAESNGFEDVKSSDK-------------IHGMKI-- 740

Query: 140  VMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
                L PYW   A            SL LLTGPNGGGKSS+LRSI
Sbjct: 741  --VGLAPYWFHIA-EGIVRNDVDMQSLFLLTGPNGGGKSSLLRSI 782


>tr|Q7X8P0|Q7X8P0_ORYSJ OSJNBa0043L24.4 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0043L24.4 PE=3 SV=1
          Length = 1037

 Score =  102 bits (253), Expect = 1e-20
 Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
 Frame = -2

Query: 497 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
           A D+K ++V ++ ++T+ VE+AL RY  A  +A  +V E+ R L+ EL+ ++N +VF S 
Sbjct: 538 AIDSKGRKVGEEWFTTIKVENALTRYHEACDNAKRKVLELLRGLSSELQDKINVLVFCST 597

Query: 317 LAVIAKTLFAHVSEGTRRDWTFP---ELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKI 147
           + +I K LF HVSEG RR W  P    L  D+  E ++ +                    
Sbjct: 598 MLIITKALFGHVSEGRRRGWVLPTISPLCKDNVTEEISSE-------------------- 637

Query: 146 RLVMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
            + +    PYW D              SL +LTGPNGGGKSS+LRS+
Sbjct: 638 -MELSGTFPYWLDTNQGNAILNDVHMHSLFILTGPNGGGKSSMLRSV 683


>tr|Q7F953|Q7F953_ORYSA OSJNBb0002J11.12 protein OS=Oryza sativa
           GN=OSJNBb0002J11.12 PE=3 SV=1
          Length = 785

 Score =  102 bits (253), Expect = 1e-20
 Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
 Frame = -2

Query: 497 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 318
           A D+K ++V ++ ++T+ VE+AL RY  A  +A  +V E+ R L+ EL+ ++N +VF S 
Sbjct: 286 AIDSKGRKVGEEWFTTIKVENALTRYHEACDNAKRKVLELLRGLSSELQDKINVLVFCST 345

Query: 317 LAVIAKTLFAHVSEGTRRDWTFP---ELVNDDDEELLTHDRKRWNL*QQPCDGGSQGGKI 147
           + +I K LF HVSEG RR W  P    L  D+  E ++ +                    
Sbjct: 346 MLIITKALFGHVSEGRRRGWVLPTISPLCKDNVTEEISSE-------------------- 385

Query: 146 RLVMEDLIPYWADKAXXXXXXXXXXXXSLHLLTGPNGGGKSSILRSI 6
            + +    PYW D              SL +LTGPNGGGKSS+LRS+
Sbjct: 386 -MELSGTFPYWLDTNQGNAILNDVHMHSLFILTGPNGGGKSSMLRSV 431