NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920599
Clone id YMU001_000139_A12
Library
Length 137
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCCTTGCACTTCTGCGCCACATCCTGAGCAGCAAGCATGGCTGCGTACGGAGAAGACTCG
TCTCTGTCAGCTTTCACCTTCATGCCACCAGTAACTCGAGCAAGCGTCTCCTTGCCAGAC
AGATCTGTGACATGCAC
■■Homology search results ■■ -
sp_hit_id P46295
Definition sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas reinhardtii
Align length 45
Score (bit) 88.2
E-value 1.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920599|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_A12.
         (137 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas ...    88   1e-17
sp|Q96W53|RS14_CANAL 40S ribosomal protein S14 OS=Candida albica...    88   1e-17
sp|P39516|RS14B_YEAST 40S ribosomal protein S14-B OS=Saccharomyc...    88   1e-17
sp|P06367|RS14A_YEAST 40S ribosomal protein S14-A OS=Saccharomyc...    88   1e-17
sp|P13471|RS14_RAT 40S ribosomal protein S14 OS=Rattus norvegicu...    88   1e-17
sp|P62264|RS14_MOUSE 40S ribosomal protein S14 OS=Mus musculus G...    88   1e-17
sp|P62263|RS14_HUMAN 40S ribosomal protein S14 OS=Homo sapiens G...    88   1e-17
sp|P62265|RS14_CRIGR 40S ribosomal protein S14 OS=Cricetulus gri...    88   1e-17
sp|P27069|RS14_KLULA 40S ribosomal protein S14 OS=Kluyveromyces ...    87   3e-17
sp|P14130|RS14_DROME 40S ribosomal protein S14 OS=Drosophila mel...    87   3e-17
sp|Q08699|RS14_PODCA 40S ribosomal protein S14 OS=Podocoryne car...    87   3e-17
sp|P42036|RS143_ARATH 40S ribosomal protein S14-3 OS=Arabidopsis...    87   3e-17
sp|Q9CAX6|RS142_ARATH 40S ribosomal protein S14-2 OS=Arabidopsis...    87   3e-17
sp|P19950|RS141_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3...    87   3e-17
sp|Q9SIH0|RS141_ARATH 40S ribosomal protein S14-1 OS=Arabidopsis...    87   3e-17
sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=3...    86   7e-17
sp|P48855|RS14_PROCL 40S ribosomal protein S14 OS=Procambarus cl...    84   2e-16
sp|O22584|RS14_LUPLU 40S ribosomal protein S14 OS=Lupinus luteus...    84   2e-16
sp|P48150|RS14_CAEEL 40S ribosomal protein S14 OS=Caenorhabditis...    84   3e-16
sp|O14150|RS14_SCHPO 40S ribosomal protein S14 OS=Schizosaccharo...    82   8e-16
sp|Q9XEK6|RS14_TORRU 40S ribosomal protein S14 OS=Tortula rurali...    80   2e-15
sp|P19800|RS14_TRYBB 40S ribosomal protein S14 OS=Trypanosoma br...    79   5e-15
sp|P19115|RS14_NEUCR 40S ribosomal protein S14 OS=Neurospora cra...    79   9e-15
sp|Q54EG3|RS14_DICDI 40S ribosomal protein S14 OS=Dictyostelium ...    78   1e-14
sp|Q9YB55|RS11_AERPE 30S ribosomal protein S11P OS=Aeropyrum per...    66   6e-11
sp|Q29303|RS14_PIG 40S ribosomal protein S14 (Fragment) OS=Sus s...    64   3e-10
sp|A2BK78|RS11_HYPBU 30S ribosomal protein S11P OS=Hyperthermus ...    62   1e-09
sp|Q5JJF3|RS11_PYRKO 30S ribosomal protein S11P OS=Pyrococcus ko...    61   2e-09
sp|P62011|RS11_PYRHO 30S ribosomal protein S11P OS=Pyrococcus ho...    61   2e-09
sp|Q8U0E3|RS11_PYRFU 30S ribosomal protein S11P OS=Pyrococcus fu...    61   2e-09

>sp|P46295|RS14_CHLRE 40S ribosomal protein S14 OS=Chlamydomonas
           reinhardtii GN=RPS14 PE=3 SV=1
          Length = 153

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 42/45 (93%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSG+ET++RVTGGMKVKADRDESSPYAAMLAAQDVAQKCK
Sbjct: 44  VHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 88


>sp|Q96W53|RS14_CANAL 40S ribosomal protein S14 OS=Candida albicans
           GN=RPS14 PE=3 SV=1
          Length = 134

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 25  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 69


>sp|P39516|RS14B_YEAST 40S ribosomal protein S14-B OS=Saccharomyces
           cerevisiae GN=RPS14B PE=1 SV=2
          Length = 138

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 29  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 73


>sp|P06367|RS14A_YEAST 40S ribosomal protein S14-A OS=Saccharomyces
           cerevisiae GN=RPS14A PE=1 SV=5
          Length = 137

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 28  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72


>sp|P13471|RS14_RAT 40S ribosomal protein S14 OS=Rattus norvegicus
           GN=Rps14 PE=2 SV=3
          Length = 151

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ RVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>sp|P62264|RS14_MOUSE 40S ribosomal protein S14 OS=Mus musculus
           GN=Rps14 PE=2 SV=3
          Length = 151

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ RVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>sp|P62263|RS14_HUMAN 40S ribosomal protein S14 OS=Homo sapiens
           GN=RPS14 PE=1 SV=3
          Length = 151

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ RVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>sp|P62265|RS14_CRIGR 40S ribosomal protein S14 OS=Cricetulus
           griseus GN=RPS14 PE=2 SV=3
          Length = 151

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ RVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>sp|P27069|RS14_KLULA 40S ribosomal protein S14 OS=Kluyveromyces
           lactis GN=RPS14 PE=3 SV=1
          Length = 137

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSG+ET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 28  VHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72


>sp|P14130|RS14_DROME 40S ribosomal protein S14 OS=Drosophila
           melanogaster GN=RpS14a PE=1 SV=1
          Length = 151

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 41/45 (91%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSG+ET+ARVTGGMKVKADRDE+SPYAAMLAAQDVA+KCK
Sbjct: 42  VHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 86
tr_hit_id B8LN86
Definition tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 45
Score (bit) 89.4
E-value 8.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920599|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_A12.
         (137 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea...    89   8e-17
tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea...    89   8e-17
tr|Q6PBW3|Q6PBW3_DANRE Ribosomal protein S14 OS=Danio rerio GN=r...    89   1e-16
tr|Q6BHV6|Q6BHV6_DEBHA DEHA2G15466p OS=Debaryomyces hansenii GN=...    89   1e-16
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten...    88   2e-16
tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten...    88   2e-16
tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas re...    88   2e-16
tr|B3LUA2|B3LUA2_YEAS1 Ribosomal protein S14A OS=Saccharomyces c...    88   2e-16
tr|B3LPT6|B3LPT6_YEAS1 Ribosomal protein S14B OS=Saccharomyces c...    88   2e-16
tr|A6ZTL2|A6ZTL2_YEAS7 Ribosomal protein S14A OS=Saccharomyces c...    88   2e-16
tr|A6ZQE5|A6ZQE5_YEAS7 Ribosomal protein S14B OS=Saccharomyces c...    88   2e-16
tr|A3LQJ1|A3LQJ1_PICST 40S ribosomal protein S14-B (RP59B) OS=Pi...    88   2e-16
tr|Q90YR0|Q90YR0_ICTPU 40S ribosomal protein S14 OS=Ictalurus pu...    88   2e-16
tr|Q6PI76|Q6PI76_XENLA Rps14-prov protein OS=Xenopus laevis GN=r...    88   2e-16
tr|Q5ZHW8|Q5ZHW8_CHICK Putative uncharacterized protein OS=Gallu...    88   2e-16
tr|Q5DVH5|Q5DVH5_PLAFE 40S ribosomal protein S14 OS=Platichthys ...    88   2e-16
tr|Q4SQ18|Q4SQ18_TETNG Chromosome 7 SCAF14536, whole genome shot...    88   2e-16
tr|B5G2W0|B5G2W0_TAEGU Putative ribosomal protein S14 variant 1 ...    88   2e-16
tr|B5G2V9|B5G2V9_TAEGU Putative ribosomal protein S14 variant 1 ...    88   2e-16
tr|B5DGX1|B5DGX1_SALSA 40S ribosomal protein S14 OS=Salmo salar ...    88   2e-16
tr|A9Z0N4|A9Z0N4_ONCMA Ribosomal protein S14 OS=Oncorhynchus mas...    88   2e-16
tr|A4IGS7|A4IGS7_XENTR Putative uncharacterized protein LOC54947...    88   2e-16
tr|A2IBV8|A2IBV8_DICLA 40S ribosomal protein S14 OS=Dicentrarchu...    88   2e-16
tr|A0EZU3|A0EZU3_SCOMX 40S ribosomal protein S14 (Fragment) OS=S...    88   2e-16
tr|Q6PDV6|Q6PDV6_RAT Rps14 protein OS=Rattus norvegicus GN=Rps14...    88   2e-16
tr|O70569|O70569_MOUSE Ribosomal protein S14 OS=Mus musculus GN=...    88   2e-16
tr|Q862B7|Q862B7_BOVIN Similar to ribosomal protein S14 (Fragmen...    88   2e-16
tr|Q66TU2|Q66TU2_FELCA Ribosomal protein S14 (Fragment) OS=Felis...    88   2e-16
tr|Q3T076|Q3T076_BOVIN Ribosomal protein S14 OS=Bos taurus GN=RP...    88   2e-16
tr|B2R5G5|B2R5G5_HUMAN cDNA, FLJ92466, Homo sapiens ribosomal pr...    88   2e-16

>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 151

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 43/45 (95%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 151

 Score = 89.4 bits (220), Expect = 8e-17
 Identities = 43/45 (95%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETMARVTGGMKVKADRDESSPYAAMLAAQDVAQRCK 86


>tr|Q6PBW3|Q6PBW3_DANRE Ribosomal protein S14 OS=Danio rerio
           GN=rps14 PE=2 SV=1
          Length = 151

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ RVTGGMKVKADRDESSPYAAMLAAQDVAQKCK
Sbjct: 42  VHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 86


>tr|Q6BHV6|Q6BHV6_DEBHA DEHA2G15466p OS=Debaryomyces hansenii
           GN=DEHA2G15466g PE=3 SV=2
          Length = 137

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/45 (95%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSG+ET+ARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK
Sbjct: 28  VHVTDLSGQETIARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 72


>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1
          Length = 151

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 42/45 (93%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDE+SPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAQRCK 86


>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1
          Length = 151

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 42/45 (93%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDE+SPYAAMLAAQDVAQ+CK
Sbjct: 42  VHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAQRCK 86


>tr|A8J768|A8J768_CHLRE Ribosomal protein S14 OS=Chlamydomonas
           reinhardtii GN=RPS14 PE=3 SV=1
          Length = 153

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 42/45 (93%), Positives = 45/45 (100%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSG+ET++RVTGGMKVKADRDESSPYAAMLAAQDVAQKCK
Sbjct: 44  VHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 88


>tr|B3LUA2|B3LUA2_YEAS1 Ribosomal protein S14A OS=Saccharomyces
           cerevisiae (strain RM11-1a) GN=SCRG_05431 PE=4 SV=1
          Length = 137

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 28  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72


>tr|B3LPT6|B3LPT6_YEAS1 Ribosomal protein S14B OS=Saccharomyces
           cerevisiae (strain RM11-1a) GN=SCRG_03489 PE=4 SV=1
          Length = 138

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 29  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 73


>tr|A6ZTL2|A6ZTL2_YEAS7 Ribosomal protein S14A OS=Saccharomyces
           cerevisiae (strain YJM789) GN=RPS14A PE=3 SV=1
          Length = 137

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -1

Query: 137 VHVTDLSGKETLARVTGGMKVKADRDESSPYAAMLAAQDVAQKCK 3
           VHVTDLSGKET+ARVTGGMKVKADRDESSPYAAMLAAQDVA KCK
Sbjct: 28  VHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCK 72