BP920607
Clone id YMU001_000139_B11
Library
Length 411
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TACTCAAGACTGTCGATTAGATCTGGTGACTTATGCTGATGGGAAACCACTGGAGATAAC
TTTACCTGGGATTAGGAAAAAGATGTCCCAAGGATCGTGGCGGCCTCGGGCATTGCTTAT
CTTACGTTCCAGTTGGTACTTGTAGTTATACTTATCGGTGGTCCAGTAGCCGTATGGCTT
GACAGGGTGCGCCCATCTTTGCTTCACCTTCTCGGCGTTGGCCTTGGTGGTAATGATGTG
CTCGCGGATCTTGCGATCGCGTTCTTCTGGATCCTCCATGCTCCGCTGAATGAGATACCC
AAAGAACTCCTTGATAAATCCCATCGCCTCTGCGCGCGCTCTCCCTCCCTCCCGACTGGT
CGGGTAGAGATTGTTCCTGCGACGTCGTTTTATTCGCGGCCGCGAATTCTT
■■Homology search results ■■ -
sp_hit_id P77624
Definition sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI OS=Escherichia coli (strain K12)
Align length 56
Score (bit) 32.7
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920607|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_B11.
(389 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI OS=Esche... 33 0.58
sp|Q8X0X2|DBP5_NEUCR ATP-dependent RNA helicase dbp-5 OS=Neurosp... 32 1.3
sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens GN... 31 1.7
sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3 31 1.7
sp|Q9P0U4|CXXC1_HUMAN CpG-binding protein OS=Homo sapiens GN=CXX... 31 2.2
sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus ... 30 2.9
sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel... 30 3.8
sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes prote... 30 4.9
sp|Q5U3J8|LTV1_DANRE Protein LTV1 homolog OS=Danio rerio GN=ltv1... 29 6.4
sp|Q8G7I6|G6PI_BIFLO Glucose-6-phosphate isomerase OS=Bifidobact... 29 6.4
sp|Q73H09|SSRP_WOLPM SsrA-binding protein OS=Wolbachia pipientis... 29 8.4
sp|Q9NV92|NFIP2_HUMAN NEDD4 family-interacting protein 2 OS=Homo... 29 8.4
sp|Q4IB63|GPI10_GIBZE GPI mannosyltransferase 3 OS=Gibberella ze... 29 8.4

>sp|P77624|ARCM_ECOLI Carbamate kinase-like protein yahI
OS=Escherichia coli (strain K12) GN=yahI PE=3 SV=1
Length = 316

Score = 32.7 bits (73), Expect = 0.58
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3

Query: 300 GYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKYQ 133
GYLIQ+++ + R + + + T+ +K +AHP KP G + +D + Q
Sbjct: 90 GYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQ 145


>sp|Q8X0X2|DBP5_NEUCR ATP-dependent RNA helicase dbp-5 OS=Neurospora
crassa GN=dbp-5 PE=3 SV=1
Length = 483

Score = 31.6 bits (70), Expect = 1.3
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -3

Query: 342 RARAEAMGFIKEFFGY-LIQRSMEDPEERDRKIREHIITTKANAEKV 205
R EA+ I +F+G LIQ + D ++ +RK++E I +++A AE V
Sbjct: 429 RRSFEALSQIAQFYGIDLIQLNPNDLDDTERKVQEVIKSSRAQAEYV 475


>sp|Q5VUA4|ZN318_HUMAN Zinc finger protein 318 OS=Homo sapiens
GN=ZNF318 PE=1 SV=2
Length = 2279

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -1

Query: 194 GRTLSSHTATGPPISITTSTNWNVR*AMPEAATILGTSFS*SQVKLSPV 48
G+T+ +HT+ P+ +TTST +R +P +T+L S S + K +P+
Sbjct: 1326 GKTVVAHTSPWMPV-VTTSTQTKIRPNLPIPSTVLRKSCSATMSKPAPL 1373


>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
Length = 4061

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2

Query: 382 SQEQSLPDQSGGRESARRGDGIYQGVLWVSHSAEHGGSRRTRSQDPRAHH 233
S ++S D+SGGR S R G +YQ + HG +R + + +HH
Sbjct: 3367 SHQESARDRSGGR-SGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHH 3415



Score = 30.8 bits (68), Expect = 2.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2

Query: 382 SQEQSLPDQSGGRESARRGDGIYQGVLWVSHSAEHGGSRRTRSQDPRAHH 233
S ++S D SGGR S R G IYQ + HG +R + + +HH
Sbjct: 1098 SHQESARDWSGGR-SGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQGSHH 1146


>sp|Q9P0U4|CXXC1_HUMAN CpG-binding protein OS=Homo sapiens GN=CXXC1
PE=1 SV=2
Length = 656

Score = 30.8 bits (68), Expect = 2.2
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Frame = -2

Query: 361 DQSGGRE--------SARRGDGIYQGVLWVSHSAE-HGGSRRTRSQDPRAHHYHQGQRRE 209
D+ GGR+ R G G G + SA H S + P HH Q Q+ +
Sbjct: 104 DEGGGRKRPVPDPDLQRRAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHQQQQQQIK 163

Query: 208 GEAKMGAPCQAIR 170
A+M C+A R
Sbjct: 164 RSARMCGECEACR 176


>sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus
musculus GN=Znf318 PE=1 SV=2
Length = 2064

Score = 30.4 bits (67), Expect = 2.9
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -1

Query: 194 GRTLSSHTATGPPISITTSTNWNVR*AMPEAATILGTSFS*SQVKLSPV 48
G+T+ +HT+ P+ +TTST +R +P +T+L S S + K +P+
Sbjct: 1178 GKTVIAHTSPWTPV-VTTSTQTKIRPNLPIPSTVLRKSGSATVSKPAPL 1225


>sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel
subunit alpha-1A OS=Homo sapiens GN=CACNA1A PE=1 SV=2
Length = 2505

Score = 30.0 bits (66), Expect = 3.8
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = -2

Query: 292 HSAEHGGSRRTRSQDPRA-----HHYHQGQRREGEAKMGAPCQAIRLLDHR 155
H GGSR +RS PR H H+ RR GE G +A R HR
Sbjct: 933 HVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPGEE--GPEDKAERRARHR 981


>sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes protein
5 OS=Gallus gallus GN=SMC5 PE=2 SV=1
Length = 1065

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3

Query: 291 IQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVK 178
IQ+ ME EE +++ ++ K + K+K+RW +P+K
Sbjct: 864 IQKLMESIEENKKELDDY----KQSISKIKERWLNPLK 897


>sp|Q5U3J8|LTV1_DANRE Protein LTV1 homolog OS=Danio rerio GN=ltv1
PE=2 SV=1
Length = 469

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3

Query: 297 YLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYNYKYQLERKI 118
+L+ RS +DP D +H++ E K++ + +G + D Y+Y L
Sbjct: 19 HLVHRSQKDPLAADETAPQHVLLPTVRVELEKRK--EEQRNFGVFFDDDYDYLQHLREST 76

Query: 117 SNA 109
A
Sbjct: 77 QTA 79


>sp|Q8G7I6|G6PI_BIFLO Glucose-6-phosphate isomerase
OS=Bifidobacterium longum GN=pgi PE=3 SV=1
Length = 566

Score = 29.3 bits (64), Expect = 6.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -3

Query: 273 DPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYW 163
D ++ I++H + N EKV++ P +G+W
Sbjct: 247 DEAQKAEAIKKHFVAVSTNLEKVEEFGIDPNNAFGFW 283


tr_hit_id A9RBY6
Definition tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 80
Score (bit) 93.6
E-value 4.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920607|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_B11.
(389 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18
tr|Q9FYF8|Q9FYF8_ARATH F1N21.17 (At1g67350) (Putative uncharacte... 91 4e-17
tr|A9P8A9|A9P8A9_POPTR Putative uncharacterized protein OS=Popul... 89 1e-16
tr|Q5YJQ2|Q5YJQ2_HYAOR Putative uncharacterized protein OS=Hyaci... 87 5e-16
tr|Q5YJP9|Q5YJP9_HYAOR At1g67350-like protein OS=Hyacinthus orie... 87 5e-16
tr|B6SI77|B6SI77_MAIZE Putative uncharacterized protein OS=Zea m... 85 2e-15
tr|Q6AVU9|Q6AVU9_ORYSJ Os03g0685900 protein OS=Oryza sativa subs... 84 3e-15
tr|B6TWW8|B6TWW8_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15
tr|A2XKS7|A2XKS7_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15
tr|A7QP62|A7QP62_VITVI Chromosome chr1 scaffold_136, whole genom... 84 5e-15
tr|A5BVR1|A5BVR1_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15
tr|A9NN34|A9NN34_PICSI Putative uncharacterized protein OS=Picea... 74 4e-12
tr|Q2PXN5|Q2PXN5_ARAHY RW1-like protein (Fragment) OS=Arachis hy... 71 3e-11
tr|A4S8M2|A4S8M2_OSTLU Predicted protein OS=Ostreococcus lucimar... 41 0.034
tr|Q935M8|Q935M8_SALTI Putative membrane protein OS=Salmonella t... 37 0.64
tr|A8R6F7|A8R6F7_SALET Putative membrane protein OS=Salmonella e... 37 0.64
tr|B6KKT9|B6KKT9_TOXGO Putative uncharacterized protein OS=Toxop... 36 1.1
tr|B6QQJ4|B6QQJ4_PENMA Methyltransferase-like protein 1 OS=Penic... 36 1.1
tr|A4V9G3|A4V9G3_SALPK Putative membrane protein OS=Salmonella p... 35 1.4
tr|Q9L5F6|Q9L5F6_SALTI Putative uncharacterized protein R0189 OS... 35 1.4
tr|A9GU50|A9GU50_9RHOB Uridylate kinase, putative OS=Roseobacter... 34 3.2
tr|A6PQ76|A6PQ76_9BACT Putative uncharacterized protein OS=Victi... 34 3.2
tr|Q4S379|Q4S379_TETNG Chromosome 4 SCAF14752, whole genome shot... 34 4.2
tr|Q4X0Y1|Q4X0Y1_ASPFU Pyruvate dehydrogenase kinase OS=Aspergil... 34 4.2
tr|B8LWH0|B8LWH0_9EURO Methyltransferase-like protein 1 OS=Talar... 34 4.2
tr|B0XSL7|B0XSL7_ASPFC Pyruvate dehydrogenase kinase OS=Aspergil... 34 4.2
tr|A1DH99|A1DH99_NEOFI Pyruvate dehydrogenase kinase OS=Neosarto... 34 4.2
tr|B0VF60|B0VF60_9BACT Putative N6 adenine-specific DNA methyltr... 33 5.5
tr|Q00TY8|Q00TY8_OSTTA Chromosome 16 contig 1, DNA sequence (Fra... 33 5.5
tr|A8N361|A8N361_COPC7 Putative uncharacterized protein OS=Copri... 33 5.5

>tr|A9RBY6|A9RBY6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_62174 PE=4 SV=1
Length = 89

Score = 93.6 bits (231), Expect = 4e-18
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGF+ EF + I+RSME+P+ERD K R+H+ +TK K+K+ WA+PVKPYG W TDK N
Sbjct: 1 MGFMMEFVEHWIRRSMENPDERDAKFRKHVYSTKEQCVKLKESWANPVKPYGSWNTDKNN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+K+ + +S GR DP++
Sbjct: 61 HKFLQDLTLSRMPGRSDPYE 80


>tr|Q9FYF8|Q9FYF8_ARATH F1N21.17 (At1g67350) (Putative
uncharacterized protein) OS=Arabidopsis thaliana PE=4
SV=1
Length = 98

Score = 90.5 bits (223), Expect = 4e-17
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGFI EF L+ R ME+PEERDRK REHI +K+K+ WA P++PYG+WT +++N
Sbjct: 1 MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + + +IS GR DP+D
Sbjct: 61 AQLRWDPQISQVAGRRDPYD 80


>tr|A9P8A9|A9P8A9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 91

Score = 89.0 bits (219), Expect = 1e-16
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGFI EF L+ R MEDP+ERDRK RE + K +K K+ W++P++PYG+WT +++N
Sbjct: 1 MGFIMEFAENLVLRLMEDPKERDRKFRERVYAVKDRCQKTKEMWSYPLRPYGFWTFERHN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS GR DP+D
Sbjct: 61 AQLAWDAQISQVPGRRDPYD 80


>tr|Q5YJQ2|Q5YJQ2_HYAOR Putative uncharacterized protein
OS=Hyacinthus orientalis PE=4 SV=1
Length = 91

Score = 86.7 bits (213), Expect = 5e-16
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
M F+ EF LI R MEDP+ERD++ REH+ K +K K+ W+ P++PYG+WT D++N
Sbjct: 1 MKFVMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS GR DP+D
Sbjct: 61 AQLAWDSQISQVPGRRDPYD 80


>tr|Q5YJP9|Q5YJP9_HYAOR At1g67350-like protein OS=Hyacinthus
orientalis PE=4 SV=1
Length = 91

Score = 86.7 bits (213), Expect = 5e-16
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
M F+ EF LI R MEDP+ERD++ REH+ K +K K+ W+ P++PYG+WT D++N
Sbjct: 1 MKFVMEFAENLILRMMEDPKERDKRAREHVYAIKDQCKKTKEMWSLPIRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS GR DP+D
Sbjct: 61 AQLAWDAQISQVPGRRDPYD 80


>tr|B6SI77|B6SI77_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 93

Score = 85.1 bits (209), Expect = 2e-15
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGFI +F LI R MEDP++RD+ REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 1 MGFIMDFAENLILRLMEDPDKRDQVRREHVYKMKERCERTKAAWSLPLRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS A GR DP+D
Sbjct: 61 SQLSWDPQISQAAGRRDPYD 80


>tr|Q6AVU9|Q6AVU9_ORYSJ Os03g0685900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0024N19.16 PE=4 SV=1
Length = 94

Score = 84.3 bits (207), Expect = 3e-15
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGF+ EF LI R MEDP +RD REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 1 MGFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS+A GR DP+D
Sbjct: 61 SQLSWDPQISHAPGRRDPYD 80


>tr|B6TWW8|B6TWW8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 93

Score = 84.3 bits (207), Expect = 3e-15
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGFI +F +I R MEDP++RD+ REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 1 MGFIMDFAENMILRLMEDPDKRDQVRREHVYKMKERCERTKAAWSLPLRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS A GR DP+D
Sbjct: 61 SQLSWDPQISQAAGRRDPYD 80


>tr|A2XKS7|A2XKS7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13066 PE=4 SV=1
Length = 94

Score = 84.3 bits (207), Expect = 3e-15
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGF+ EF LI R MEDP +RD REH+ K E+ K W+ P++PYG+WT D++N
Sbjct: 1 MGFVMEFAENLILRMMEDPGKRDAAQREHVYRMKERCERTKAAWSLPLRPYGFWTFDRFN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS+A GR DP+D
Sbjct: 61 SQLSWDPQISHAPGRRDPYD 80


>tr|A7QP62|A7QP62_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002814001
PE=4 SV=1
Length = 91

Score = 83.6 bits (205), Expect = 5e-15
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = -3

Query: 324 MGFIKEFFGYLIQRSMEDPEERDRKIREHIITTKANAEKVKQRWAHPVKPYGYWTTDKYN 145
MGFI EF LI + MEDP+ERDR+ RE + K ++ K+ W+ P++PYG+WT +++N
Sbjct: 1 MGFIMEFAENLILKLMEDPKERDRRARERLYAVKDRCDRTKEIWSFPIRPYGFWTFERHN 60

Query: 144 YKYQLERKISNARGRHDPWD 85
+ + +IS GR DP+D
Sbjct: 61 SQLAWDPQISQVPGRRDPYD 80