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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920611
Clone id YMU001_000139_C05
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTGCAAAACAATCGAATGTATGCCTATCTTTCTTCTTCACTATCTTCATTAAGGCTTGT
TTTAGAAAGCCAAAAAGGTGAAGCAGGACGGTCCCACCCCATCCTACAGCACACACAGGC
ACTAAATTTTGTGCCCGAGTTTGCCGCCATCAATCTCACAGCTCCTAGGTCACTAGATAT
CCCATGAGAGATAGAGTTGAGCTATATATAGGGCATGACCCAACCTGAAATCAACAGGAT
AGACAGTCCAAAGAGCTTCTTGATGTCCAAACTCCAAAGGAAGAGACACTCATTCTCTTG
ATGTAAGCTCTGCTGTACATTTTTCCTCAAGGCACTGCGTCCTGCTCAAATGAGGCAAAC
TTGCACCATCCTTTCGGAATCGGAAAGAGATCAATGGCTTGCCTCAATGGTCCATTATCT
TTAAGGACTTCCCCCTCGTTCCCATGATCCCATCGCACTAAGAATTGCAAGATCAACCTC
TTCAAGGGCCCTGGACATTCAAGCCTTCCAAGATGCCCCTGG
■■Homology search results ■■ -
sp_hit_id Q86AS5
Definition sp|Q86AS5|PPCE_DICDI Prolyl endopeptidase OS=Dictyostelium discoideum
Align length 56
Score (bit) 29.6
E-value 9.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920611|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C05.
         (522 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86AS5|PPCE_DICDI Prolyl endopeptidase OS=Dictyostelium disco...    30   9.0  
sp|Q87F36|SYV_XYLFT Valyl-tRNA synthetase OS=Xylella fastidiosa ...    30   9.1  

>sp|Q86AS5|PPCE_DICDI Prolyl endopeptidase OS=Dictyostelium
           discoideum GN=prep PE=1 SV=1
          Length = 760

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 21/56 (37%), Positives = 25/56 (44%)
 Frame = -2

Query: 449 DHGNEGEVLKDNGPLRQAIDLFPIPKGWCKFASFEQDAVP*GKMYSRAYIKRMSVS 282
           D   E E LK    L  A+   P    WCKF S + D    G +Y+R Y K   VS
Sbjct: 187 DDEEEKEDLKKKNCLHYAVVDLPDSINWCKFTSIKWDENETGFIYNR-YPKPEKVS 241


>sp|Q87F36|SYV_XYLFT Valyl-tRNA synthetase OS=Xylella fastidiosa
           (strain Temecula1 / ATCC 700964) GN=valS PE=3 SV=1
          Length = 994

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 RYPMRDRVEL-YIGHDPT*NQQDRQSKELLDVQTPKEETLI 294
           RYP+ D V   +I HD   N+  R++++ L V T + ETL+
Sbjct: 203 RYPLSDGVTYEHIEHDAAGNETLRETRDSLIVATTRPETLL 243
tr_hit_id Q9FT57
Definition tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_20 OS=Arabidopsis thaliana
Align length 84
Score (bit) 35.4
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920611|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C05.
         (522 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_2...    35   1.7  
tr|Q6PED5|Q6PED5_MOUSE Erdr1 protein OS=Mus musculus GN=Erdr1 PE...    34   5.1  
tr|Q16Y11|Q16Y11_AEDAE Putative uncharacterized protein OS=Aedes...    33   6.6  

>tr|Q9FT57|Q9FT57_ARATH Putative uncharacterized protein T25B15_20
            OS=Arabidopsis thaliana GN=T25B15_20 PE=4 SV=1
          Length = 1677

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = -1

Query: 294  NECLFLWSLDIKKLFGL-SILLISGWVMPYI*LNSISHGISSDLGAVRLMAANSGTKFSA 118
            ++C   +S  ++K  GL SI   SG V   + +++ + G  SDL     M +NSG   + 
Sbjct: 1143 DQCKVFFS-KVRKCLGLESIKFGSGNVSTSVSVDNGNEGGGSDLEDPCPMESNSGIVNNG 1201

Query: 117  CVCCRMGWDRPASPFWLSKTSLNE 46
             VC +MG + P SPF +++  +N+
Sbjct: 1202 -VCAKMGMNSPTSPFNMNQDGVNQ 1224


>tr|Q6PED5|Q6PED5_MOUSE Erdr1 protein OS=Mus musculus GN=Erdr1 PE=2
           SV=1
          Length = 145

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 25/76 (32%), Positives = 32/76 (42%)
 Frame = +1

Query: 64  RKPKR*SRTVPPHPTAHTGTKFCARVCRHQSHSS*VTRYPMRDRVELYIGHDPT*NQQDR 243
           RKP   + T PPHP  HTG     R  RH  H    TR+  R   + +    P    Q R
Sbjct: 19  RKP---APTAPPHPPQHTGHTRAPRPPRHTRH----TRH-TRQAGQAHASAGPAPATQTR 70

Query: 244 QSKELLDVQTPKEETL 291
            S+   DV  P+   +
Sbjct: 71  TSRRGQDVHPPRSRCM 86


>tr|Q16Y11|Q16Y11_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL008709 PE=4 SV=1
          Length = 1206

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 319 IFPQGTASCSNEANLHHPFGIGKRSMACLNGPLSLRTSPSF-P*SHRTKNCKINLFKGP 492
           + PQG  +C+   +L      G RSM  L+ PL+L  S S      +T N  +N+ KGP
Sbjct: 570 VTPQGRRACAFFNDLGSRVSRGGRSMGGLSTPLNLNISSSMQEIKPKTINISVNIIKGP 628