BP920613
Clone id YMU001_000139_C07
Library
Length 170
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCACATCATTTACTTCTGAAAGGAAATTGAATACGAGCCAGTATTCGGATCTTGGACAG
CCTTGAAGTTGTCCACACTCATTCCAAATTTTCCCAAGACAGTATTTCCCAAGTCCTTTA
ATTTTGCTATCATCTCCTCTTTGAGCTTTTCCCTACGTTCTGCAACAATG
■■Homology search results ■■ -
sp_hit_id Q91Z38
Definition sp|Q91Z38|TTC1_MOUSE Tetratricopeptide repeat protein 1 OS=Mus musculus
Align length 49
Score (bit) 67.4
E-value 2.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920613|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C07.
(170 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q91Z38|TTC1_MOUSE Tetratricopeptide repeat protein 1 OS=Mus m... 67 2e-11
sp|Q99614|TTC1_HUMAN Tetratricopeptide repeat protein 1 OS=Homo ... 67 2e-11
sp|Q3ZBR5|TTC1_BOVIN Tetratricopeptide repeat protein 1 OS=Bos t... 67 2e-11

>sp|Q91Z38|TTC1_MOUSE Tetratricopeptide repeat protein 1 OS=Mus
musculus GN=Ttc1 PE=2 SV=1
Length = 292

Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -2

Query: 166 VAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISF 20
+ ER E+LKEEM+ KLKDLGN VL FG+S +NF+ QD +TGSYSI+F
Sbjct: 236 IEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284


>sp|Q99614|TTC1_HUMAN Tetratricopeptide repeat protein 1 OS=Homo
sapiens GN=TTC1 PE=1 SV=1
Length = 292

Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -2

Query: 166 VAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISF 20
+ ER E+LKEEM+ KLKDLGN VL FG+S +NF+ QD +TGSYSI+F
Sbjct: 236 IEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284


>sp|Q3ZBR5|TTC1_BOVIN Tetratricopeptide repeat protein 1 OS=Bos
taurus GN=TTC1 PE=2 SV=1
Length = 292

Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -2

Query: 166 VAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISF 20
+ ER E+LKEEM+ KLKDLGN VL FG+S +NF+ QD +TGSYSI+F
Sbjct: 236 IEERNERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284


tr_hit_id Q8W378
Definition tr|Q8W378|Q8W378_ORYSA Putative tetratricopeptide repeat protein OS=Oryza sativa
Align length 52
Score (bit) 92.8
E-value 7.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920613|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C07.
(170 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8W378|Q8W378_ORYSA Putative tetratricopeptide repeat protein... 93 7e-18
tr|Q7XD86|Q7XD86_ORYSJ Os10g0486900 protein OS=Oryza sativa subs... 93 7e-18
tr|B4FL68|B4FL68_MAIZE Putative uncharacterized protein OS=Zea m... 93 7e-18
tr|A3C5X0|A3C5X0_ORYSJ Putative uncharacterized protein OS=Oryza... 93 7e-18
tr|A2Z8Q3|A2Z8Q3_ORYSI Putative uncharacterized protein OS=Oryza... 93 7e-18
tr|B8LL10|B8LL10_PICSI Putative uncharacterized protein OS=Picea... 92 1e-17
tr|Q9M0B2|Q9M0B2_ARATH Putative uncharacterized protein AT4g3048... 87 5e-16
tr|Q8LF50|Q8LF50_ARATH Putative uncharacterized protein OS=Arabi... 87 5e-16
tr|B6GVA2|B6GVA2_SOLLC Tetratricopeptide repeat protein OS=Solan... 86 9e-16
tr|A7PFI8|A7PFI8_VITVI Chromosome chr11 scaffold_14, whole genom... 85 2e-15
tr|A5BNZ6|A5BNZ6_VITVI Putative uncharacterized protein OS=Vitis... 85 2e-15
tr|A8I9Z4|A8I9Z4_CHLRE TPR protein (Fragment) OS=Chlamydomonas r... 78 2e-13
tr|Q54QR4|Q54QR4_DICDI Putative uncharacterized protein OS=Dicty... 78 2e-13
tr|A7YXM9|A7YXM9_9ALVE Tetratricopeptide repeat protein OS=Perki... 76 9e-13
tr|B8BVZ6|B8BVZ6_THAPS Predicted protein (Fragment) OS=Thalassio... 73 8e-12
tr|A2Z8R3|A2Z8R3_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|Q00VR3|Q00VR3_OSTTA FOG: TPR repeat (ISS) OS=Ostreococcus tau... 71 3e-11
tr|Q7Q9B6|Q7Q9B6_ANOGA AGAP003336-PA (Fragment) OS=Anopheles gam... 71 3e-11
tr|B3S366|B3S366_TRIAD Putative uncharacterized protein OS=Trich... 70 4e-11
tr|B7FW15|B7FW15_PHATR Predicted protein OS=Phaeodactylum tricor... 70 5e-11
tr|Q9VEV3|Q9VEV3_DROME CG14894 OS=Drosophila melanogaster GN=CG1... 70 5e-11
tr|B4PQZ5|B4PQZ5_DROYA GE26312 OS=Drosophila yakuba GN=GE26312 P... 70 5e-11
tr|B3P124|B3P124_DROER GG19960 OS=Drosophila erecta GN=GG19960 P... 70 5e-11
tr|Q16V27|Q16V27_AEDAE Putative uncharacterized protein OS=Aedes... 69 9e-11
tr|Q295W5|Q295W5_DROPS GA13331 OS=Drosophila pseudoobscura pseud... 69 1e-10
tr|B6KGV4|B6KGV4_TOXGO TPR domain-containing protein OS=Toxoplas... 69 1e-10
tr|B4GFL4|B4GFL4_DROPE GL22240 OS=Drosophila persimilis GN=GL222... 69 1e-10
tr|Q5U3P1|Q5U3P1_DANRE Zgc:101838 OS=Danio rerio GN=ttc1 PE=2 SV=1 69 2e-10
tr|Q4SPU7|Q4SPU7_TETNG Chromosome 7 SCAF14536, whole genome shot... 69 2e-10
tr|B0XDM8|B0XDM8_CULQU Tetratricopeptide repeat protein 1 OS=Cul... 69 2e-10

>tr|Q8W378|Q8W378_ORYSA Putative tetratricopeptide repeat protein
OS=Oryza sativa GN=OSJNBa0029C15.16 PE=4 SV=1
Length = 548

Score = 92.8 bits (229), Expect = 7e-18
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REK+KEEMI KLKDLGN+VLG+FGMSVDNFKAV+DPNTGSYSISFQ+
Sbjct: 497 LAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQQ 548


>tr|Q7XD86|Q7XD86_ORYSJ Os10g0486900 protein OS=Oryza sativa subsp.
japonica GN=Os10g0486900 PE=2 SV=2
Length = 236

Score = 92.8 bits (229), Expect = 7e-18
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REK+KEEMI KLKDLGN+VLG+FGMSVDNFKAV+DPNTGSYSISFQ+
Sbjct: 185 LAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQQ 236


>tr|B4FL68|B4FL68_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 255

Score = 92.8 bits (229), Expect = 7e-18
Identities = 43/52 (82%), Positives = 49/52 (94%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REK+KEEMI KLKDLGN+VLG+FGMSVDNFKAV+DPNTGSYSI FQK
Sbjct: 204 LAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSIQFQK 255


>tr|A3C5X0|A3C5X0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_030692 PE=4 SV=1
Length = 383

Score = 92.8 bits (229), Expect = 7e-18
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REK+KEEMI KLKDLGN+VLG+FGMSVDNFKAV+DPNTGSYSISFQ+
Sbjct: 332 LAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQQ 383


>tr|A2Z8Q3|A2Z8Q3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34095 PE=4 SV=1
Length = 344

Score = 92.8 bits (229), Expect = 7e-18
Identities = 43/52 (82%), Positives = 50/52 (96%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REK+KEEMI KLKDLGN+VLG+FGMSVDNFKAV+DPNTGSYSISFQ+
Sbjct: 293 LAAEKREKMKEEMIGKLKDLGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQQ 344


>tr|B8LL10|B8LL10_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 278

Score = 92.0 bits (227), Expect = 1e-17
Identities = 42/52 (80%), Positives = 50/52 (96%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ AE+REKLKEEMI KLKDLGN++LG+FGMSVDNFKAV+DPN+GSYSISFQ+
Sbjct: 227 LAAEKREKLKEEMIGKLKDLGNSILGRFGMSVDNFKAVKDPNSGSYSISFQR 278


>tr|Q9M0B2|Q9M0B2_ARATH Putative uncharacterized protein AT4g30480
OS=Arabidopsis thaliana GN=At4g30480 PE=2 SV=1
Length = 277

Score = 86.7 bits (213), Expect = 5e-16
Identities = 38/51 (74%), Positives = 48/51 (94%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQ 17
+ AE+REK+KEE I KLK++GN++LG+FGMSVDNFKAV+DPNTGSYS+SFQ
Sbjct: 226 LAAEKREKMKEEAITKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSLSFQ 276


>tr|Q8LF50|Q8LF50_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 277

Score = 86.7 bits (213), Expect = 5e-16
Identities = 38/51 (74%), Positives = 48/51 (94%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQ 17
+ AE+REK+KEE I KLK++GN++LG+FGMSVDNFKAV+DPNTGSYS+SFQ
Sbjct: 226 LAAEKREKMKEEAITKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSLSFQ 276


>tr|B6GVA2|B6GVA2_SOLLC Tetratricopeptide repeat protein OS=Solanum
lycopersicum GN=int106 PE=2 SV=1
Length = 261

Score = 85.9 bits (211), Expect = 9e-16
Identities = 37/49 (75%), Positives = 46/49 (93%)
Frame = -2

Query: 160 ERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
E+REK+KEEMI KLK++GN++LG+FGMSVDNFK V+DPNTGSYS+ FQK
Sbjct: 213 EKREKMKEEMIGKLKEMGNSILGRFGMSVDNFKTVKDPNTGSYSVQFQK 261


>tr|A7PFI8|A7PFI8_VITVI Chromosome chr11 scaffold_14, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017113001
PE=4 SV=1
Length = 262

Score = 84.7 bits (208), Expect = 2e-15
Identities = 38/52 (73%), Positives = 47/52 (90%)
Frame = -2

Query: 169 IVAERREKLKEEMIAKLKDLGNTVLGKFGMSVDNFKAVQDPNTGSYSISFQK 14
+ E++EKLKEEMI KLKD+GN++LG+FGMSVDNFKAV+DP TG YSISFQ+
Sbjct: 211 LAKEKQEKLKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPETGQYSISFQR 262