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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920617
Clone id YMU001_000139_C11
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACACAATCAATTTCTATGTCCAGAAGCTTGCTTTTGAAACTTGAGTTACCGCAGCTTAAG
GCCGTAATGGTTGCACAAGAGATGCAGGGGCCCAGAGGATACACCGCAGAAGTCTGCCAA
TCATCACTCCCACTTGTGTTGGGATCATACACCAATGTTTTGCAGCCCGAATCTGTCCTC
CTTGGAAAAAGCAAAATTTTGCCATTGAAACTGCCCAAACAGAAGCCCAAACTCAAACTC
CCTGTTAGTGGGATAGGCACACATTTCCAGGCATTTTGTGCAGGATCATAGACCGTCAGC
TTCCTCTCATTCTTCCATTCTATGCAATAGACTTTCTTGT
■■Homology search results ■■ -
sp_hit_id Q9CAG8
Definition sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Arabidopsis thaliana
Align length 88
Score (bit) 84.0
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920617|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C11.
         (325 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Ar...    84   2e-16
sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27...    38   0.018
sp|Q6Q7X9|KLH31_DANRE Kelch-like protein 31 OS=Danio rerio GN=kl...    31   2.2  
sp|A8GPB1|UBIG_RICAH 3-demethylubiquinone-9 3-methyltransferase ...    30   4.8  
sp|A1JMV0|NANM_YERE8 N-acetylneuraminate epimerase OS=Yersinia e...    29   6.3  
sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens...    29   8.5  

>sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480
           OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1
          Length = 376

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 37/88 (42%), Positives = 55/88 (62%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           I+WKN RK++V++     W+ V +PL+GS   GF  G  +GK+LLF  + ++G  TL+YD
Sbjct: 289 IDWKNHRKMSVFNAEDETWEVVALPLSGSSRAGFQFGKLSGKLLLFSSQEETGQCTLLYD 348

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P+ S    W+TS +   G C+   TITA
Sbjct: 349 PDASPGTQWKTSEIKLSGSCVCSVTITA 376


>sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27420
           OS=Arabidopsis thaliana GN=At1g27420 PE=4 SV=1
          Length = 360

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -3

Query: 302 KLTVYDPAQNAWKCVPIPLTGSLSLGFC--LGSFNGKILLFPRRTDSGCKTLVYDPNTSG 129
           +L V+DP +N+W  V +P       GF   LG +N K+LLF R    G +TL+YD +   
Sbjct: 282 RLGVFDPEENSWSSVFVPPREG---GFWVRLGVWNNKVLLFSR--VCGHETLMYDLDKEK 336

Query: 128 SDDWQ 114
              W+
Sbjct: 337 GSKWR 341


>sp|Q6Q7X9|KLH31_DANRE Kelch-like protein 31 OS=Danio rerio
           GN=klhl31 PE=2 SV=1
          Length = 635

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = -3

Query: 290 YDPAQNAWKCVPIPLTGSLS--LGFCLGSFNGKILLFPRRTDSGCKTLV--YDPNTSGSD 123
           YDP  N W    I L   +     F L +FNG +     R   GC+  V  Y P+   S+
Sbjct: 393 YDPRFNTW----IHLANMIQKRTHFSLNTFNGLLFAVGGRNSDGCQASVECYVPS---SN 445

Query: 122 DWQTSAVYPLGPCISCATI 66
            WQ  A   +  C   +++
Sbjct: 446 QWQMKAPMEVPRCCHASSV 464


>sp|A8GPB1|UBIG_RICAH 3-demethylubiquinone-9 3-methyltransferase
           OS=Rickettsia akari (strain Hartford) GN=ubiG PE=3 SV=1
          Length = 251

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 308 ERKLTVYDPAQNAWKCVPIPLTGSLSLGF--CLGSFNGK 198
           E K  VYDPA+N WK     L+  + + +  CLGS N K
Sbjct: 205 ELKGLVYDPAKNEWK-----LSDDIDVNYFMCLGSKNAK 238


>sp|A1JMV0|NANM_YERE8 N-acetylneuraminate epimerase OS=Yersinia
           enterocolitica serotype O:8 / biotype 1B (strain 8081)
           GN=nanM PE=3 SV=1
          Length = 392

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -3

Query: 305 RKLTVYDPAQNAWKC-VPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKT-LVYDPNTS 132
           R + +YDPA+N WK    +P  G  + G  + +  G ++L       G +T  V+   T 
Sbjct: 206 RDVLMYDPAKNQWKSGGQVPFLG--TAGSAITAKKGDLILINGEIKPGLRTAAVWQGKTQ 263

Query: 131 GSD-DWQ 114
           G++  WQ
Sbjct: 264 GTELKWQ 270


>sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens
           GN=GANC PE=2 SV=2
          Length = 914

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 86  RGPEDTPQKSANHHSHLCWDH 148
           RGPE T QK+A HH +  W+H
Sbjct: 519 RGPEQTMQKNAIHHGN--WEH 537
tr_hit_id A9NX50
Definition tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 88
Score (bit) 109.0
E-value 8.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920617|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_C11.
         (325 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea...   109   8e-23
tr|A7QP88|A7QP88_VITVI Chromosome chr1 scaffold_136, whole genom...   103   3e-21
tr|A5BA49|A5BA49_VITVI Putative uncharacterized protein OS=Vitis...   103   3e-21
tr|Q6K649|Q6K649_ORYSJ Os02g0504900 protein OS=Oryza sativa subs...    92   1e-17
tr|A3A772|A3A772_ORYSJ Putative uncharacterized protein OS=Oryza...    92   1e-17
tr|A2X562|A2X562_ORYSI Putative uncharacterized protein OS=Oryza...    92   1e-17
tr|Q7XNP9|Q7XNP9_ORYSJ Os04g0380300 protein OS=Oryza sativa subs...    91   4e-17
tr|B8AT23|B8AT23_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|B0P896|B0P896_9FIRM Putative uncharacterized protein OS=Anaer...    34   4.1  
tr|Q8H9Z0|Q8H9Z0_9CAUD Orf1 OS=Lactococcus phage CHL92 PE=4 SV=1       33   5.4  
tr|B0WSW4|B0WSW4_CULQU Putative uncharacterized protein OS=Culex...    33   7.0  
tr|A3UDK4|A3UDK4_9RHOB Putative uncharacterized protein OS=Ocean...    33   7.0  
tr|B6MMS9|B6MMS9_BRAFL Putative uncharacterized protein OS=Branc...    33   9.2  

>tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 386

 Score =  109 bits (272), Expect = 8e-23
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           +EWKNERKL V++   N+W+ VP+PLTGS+++GFC G  NG +LLFP + +  CKTLVYD
Sbjct: 299 MEWKNERKLAVFNVVDNSWQRVPLPLTGSVTVGFCFGILNGNLLLFPTKMEPLCKTLVYD 358

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           PN     +WQ   + PLG CI   TITA
Sbjct: 359 PNAMPGLEWQAIDIRPLGICICTVTITA 386


>tr|A7QP88|A7QP88_VITVI Chromosome chr1 scaffold_136, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002843001
           PE=4 SV=1
          Length = 385

 Score =  103 bits (258), Expect = 3e-21
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           +EWKN+RKL +++P  N+WK VP+PLTGS S+GF  G   GK+LLF    D G +TL+YD
Sbjct: 298 MEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLFSLEEDPGYRTLLYD 357

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P+ +   +WQTS + P G C+   TI A
Sbjct: 358 PDAAPGSEWQTSEIKPSGSCLCSVTIKA 385


>tr|A5BA49|A5BA49_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018334 PE=4 SV=1
          Length = 371

 Score =  103 bits (258), Expect = 3e-21
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           +EWKN+RKL +++P  N+WK VP+PLTGS S+GF  G   GK+LLF    D G +TL+YD
Sbjct: 284 MEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILEGKLLLFSLEEDPGYRTLLYD 343

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P+ +   +WQTS + P G C+   TI A
Sbjct: 344 PDAAPGSEWQTSEIKPSGSCLCSVTIKA 371


>tr|Q6K649|Q6K649_ORYSJ Os02g0504900 protein OS=Oryza sativa subsp.
           japonica GN=OJ1003_F04.33 PE=4 SV=1
          Length = 385

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           IEWKN+R L V++PA N+W+ VP+PLTGS S  FC G  +GK+LLF    +   KTL+YD
Sbjct: 298 IEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYD 357

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P      +W TS + P G C+   TI A
Sbjct: 358 PAAPTGSEWFTSELKPPGLCLCSVTIRA 385


>tr|A3A772|A3A772_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006644 PE=4 SV=1
          Length = 364

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           IEWKN+R L V++PA N+W+ VP+PLTGS S  FC G  +GK+LLF    +   KTL+YD
Sbjct: 277 IEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYD 336

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P      +W TS + P G C+   TI A
Sbjct: 337 PAAPTGSEWFTSELKPPGLCLCSVTIRA 364


>tr|A2X562|A2X562_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07338 PE=4 SV=1
          Length = 364

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 43/88 (48%), Positives = 56/88 (63%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           IEWKN+R L V++PA N+W+ VP+PLTGS S  FC G  +GK+LLF    +   KTL+YD
Sbjct: 277 IEWKNQRSLAVFNPADNSWQKVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYD 336

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATITA 60
           P      +W TS + P G C+   TI A
Sbjct: 337 PAAPTGSEWCTSELKPPGLCLCSVTIRA 364


>tr|Q7XNP9|Q7XNP9_ORYSJ Os04g0380300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0089B03.12 PE=2 SV=1
          Length = 375

 Score = 90.5 bits (223), Expect = 4e-17
 Identities = 37/86 (43%), Positives = 57/86 (66%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           IEWKN+R L +++P+ ++W+ +P+PLTGS +  F LG  +GK+LLF +  + G +TL+YD
Sbjct: 288 IEWKNQRSLAIFNPSDSSWQKIPVPLTGSSATLFSLGVLDGKLLLFSQEEEPGYQTLMYD 347

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATI 66
           P      +W TS + P G C+   TI
Sbjct: 348 PTAPAGSEWHTSTLKPSGLCLCSVTI 373


>tr|B8AT23|B8AT23_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15607 PE=4 SV=1
          Length = 377

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 36/86 (41%), Positives = 56/86 (65%)
 Frame = -3

Query: 323 IEWKNERKLTVYDPAQNAWKCVPIPLTGSLSLGFCLGSFNGKILLFPRRTDSGCKTLVYD 144
           IEWKN+R L +++P+ ++W+ + +PLTGS +  F LG  +GK+LLF +  + G +TL+YD
Sbjct: 290 IEWKNQRSLAIFNPSDSSWQKILVPLTGSSTTLFSLGVLDGKLLLFSQEEEPGYQTLMYD 349

Query: 143 PNTSGSDDWQTSAVYPLGPCISCATI 66
           P      +W TS + P G C+   TI
Sbjct: 350 PTAPAGYEWHTSTLKPSGLCLCSVTI 375


>tr|B0P896|B0P896_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_00985
           PE=4 SV=1
          Length = 606

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 200 KILLFPRRTDSGCKTLVYDPNTSGSDDWQ 114
           KI L  R+    C+ L ++PN  G DDWQ
Sbjct: 372 KIYLMARKNGMACRQLTWNPNYKGFDDWQ 400


>tr|Q8H9Z0|Q8H9Z0_9CAUD Orf1 OS=Lactococcus phage CHL92 PE=4 SV=1
          Length = 628

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
 Frame = -3

Query: 290 YDPAQNAWKCVPIPLTGSLSLGFCLGSF-----NGKILLFPRRTDSGCKTLVY-DPNTSG 129
           Y  A   ++   IP +  L++G+ LGS+     +GK +   R       + V+ +PN SG
Sbjct: 356 YKQASQGYRVDEIPRSAILNIGYSLGSYYVNEDSGKEVNVLRSKVGITPSQVFGEPNYSG 415

Query: 128 SDDWQTSAVYPLG 90
            +DW T+   P G
Sbjct: 416 MNDWMTTCGLPNG 428