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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920621
Clone id YMU001_000139_D05
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTGAGGTGTGGTGAGAGAGTGCACTCTGGCTGAATTGAGAGAGTGCAACAGAAGCTTGA
GGCGTGGTGAGAGAGTGCACCTCTGCCTGAATGAGAGAGTGAGAGAGAGAGAGATTATGT
ACAGATTTGTGGCAGCGGGTTTGCCAACTAAACGGCAGTGAGTCCAATTGTATTGTGAGA
GAGCTTATACTACTTTGGAGTTATTGGTAATGAGTTATTATAATAGCCCACTTTGTGTTG
CTCACTTGTTCTAAAGGTGTGCCTAGGACCTCAGTGTTAGGTACTGAAGGGCAACCTTTT
CTTTGGAAAGACAGGCACAAGGAACTTTATTTTCATTCTAAATGCCCTTTTAATGACAAA
ATATCACAAAAATTACAAGTCAATTTTTGTAATTATGCAGTGTGCTCGGTGAGAAATATT
GGTAGATTGTCTATTTATTGTCAAAACAATCTACCACATGAAGCCTAAAACACGCTTTTG
TTTTCCATTGTACGCTTTCCGTTTTCAATGTCATAGCATGTGACC
■■Homology search results ■■ -
sp_hit_id Q3UN02
Definition sp|Q3UN02|LYCAT_MOUSE Lysocardiolipin acyltransferase OS=Mus musculus
Align length 49
Score (bit) 29.6
E-value 9.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920621|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_D05.
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3UN02|LYCAT_MOUSE Lysocardiolipin acyltransferase OS=Mus mus...    30   9.1  

>sp|Q3UN02|LYCAT_MOUSE Lysocardiolipin acyltransferase OS=Mus
           musculus GN=Lycat PE=2 SV=2
          Length = 376

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 78  HLCLNERVREREI-MYRFVAAGLPTKRQ*VQLYCERAYTTLELLVMSYY 221
           HL L +  +E    + R+ A  LPT ++ +QL+C R +   E  + S+Y
Sbjct: 233 HLLLGDFPKEIHFHVQRYPADSLPTSKEDLQLWCHRRWEEKEERLRSFY 281
tr_hit_id A8SJA4
Definition tr|A8SJA4|A8SJA4_9FIRM Putative uncharacterized protein OS=Parvimonas micra ATCC 33270
Align length 63
Score (bit) 33.1
E-value 8.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920621|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_D05.
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8SJA4|A8SJA4_9FIRM Putative uncharacterized protein OS=Parvi...    33   8.6  

>tr|A8SJA4|A8SJA4_9FIRM Putative uncharacterized protein
           OS=Parvimonas micra ATCC 33270 GN=PEPMIC_00254 PE=4 SV=1
          Length = 660

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 290 GNLFFGKTGTRNFIFILN---ALLMTKYHKNYKSIFVIMQCAR*EILVDCLFIVKTIYHM 460
           G LFF K G   F+F ++    +L T   KNY S+ V        ++V  L +  T+  M
Sbjct: 479 GKLFFDKNGLSGFLFYISFIVIVLNTVLLKNYVSVNVSSMITIVSVVV--LVVTSTLMFM 536

Query: 461 KPK 469
           KPK
Sbjct: 537 KPK 539