BP920624 |
Clone id |
YMU001_000139_D09 |
Library |
YMU01 |
Length |
293 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_D09. |
Accession |
BP920624 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL46Contig1 |
Sequence |
GAGTGTCCCGAATGGCAGCAGCGGGAGGCCTGACGATGAATCTCCCGGTCTACATGCTGT GCTTATTGATATTGATTATGGGCACGGGAACGGGATCCTTAAGAGCAGCGCAGGCTGTAA CCGGGAAGTGTGAACTGCGTCTCTATCAACTTCAAGTTCATCCCTTGCTTCTCCTACCTT ACCGATAAGTCCCTTCGACCAGCTGCCCCTTCGCAGTCTTGCTGCACCAACGTGATGGCC CTCAATACCCAATTTCAAGGCCTCAAGAGGCAGGGCGTCTGTGAGTGCATCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41073 |
Definition |
sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinus taeda |
Align length |
57 |
Score (bit) |
38.9 |
E-value |
0.008 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920624|Adiantum capillus-veneris mRNA, clone: YMU001_000139_D09. (293 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinu... 39 0.008 sp|Q9LDB4|NLTP6_ARATH Non-specific lipid-transfer protein 6 OS=A... 38 0.018 sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3 OS=O... 37 0.030 sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3 OS=O... 37 0.030 sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A OS=B... 36 0.051 sp|P07597|NLTP1_HORVU Non-specific lipid-transfer protein 1 OS=H... 36 0.067 sp|Q9ZUK6|NLTP7_ARATH Non-specific lipid-transfer protein 7 OS=A... 35 0.088 sp|P10973|NLTPA_RICCO Non-specific lipid-transfer protein A OS=R... 35 0.11 sp|Q39950|NLTP_HELAN Non-specific lipid-transfer protein OS=Heli... 35 0.15 sp|O24418|NLTP6_GOSHI Non-specific lipid-transfer protein 6 OS=G... 33 0.33 sp|A2ZAT0|NLTP2_ORYSI Non-specific lipid-transfer protein 2 OS=O... 33 0.33 sp|Q7XJ39|NLT2A_ORYSJ Non-specific lipid-transfer protein 2A OS=... 33 0.33 sp|Q9LLR7|NLTP3_ARATH Non-specific lipid-transfer protein 3 OS=A... 33 0.43 sp|Q2QYL2|NLT2B_ORYSJ Non-specific lipid-transfer protein 2B OS=... 33 0.43 sp|P10975|NLTPC_RICCO Non-specific lipid-transfer protein C, cot... 33 0.57 sp|O04004|NLTP6_AMBAR Non-specific lipid-transfer protein OS=Amb... 32 0.74 sp|Q43194|NLTP2_SORBI Non-specific lipid-transfer protein 2 OS=S... 32 0.74 sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2 OS=B... 32 0.74 sp|P19656|NLTP_MAIZE Non-specific lipid-transfer protein OS=Zea ... 32 0.97 sp|A0AT30|NLTP3_LENCU Non-specific lipid-transfer protein 3 OS=L... 32 0.97 sp|Q43767|NLT41_HORVU Non-specific lipid-transfer protein 4.1 OS... 32 0.97 sp|O65888|NLTP_STRHE Non-specific lipid-transfer protein (Fragme... 32 1.3 sp|Q39794|NLTP_GERHY Non-specific lipid-transfer protein OS=Gerb... 32 1.3 sp|A0AT32|NLTP6_LENCU Non-specific lipid-transfer protein 6 OS=L... 32 1.3 sp|O65091|NLTP4_ORYSJ Non-specific lipid-transfer protein 4 OS=O... 32 1.3 sp|A0AT33|NLTP4_LENCU Non-specific lipid-transfer protein 4 (Fra... 32 1.3 sp|A0AT29|NLTP2_LENCU Non-specific lipid-transfer protein 2 OS=L... 32 1.3 sp|A0AT28|NLTP1_LENCU Non-specific lipid-transfer protein 1 OS=L... 32 1.3 sp|A0AT31|NLTP5_LENCU Non-specific lipid-transfer protein 5 OS=L... 31 2.2 sp|Q43193|NLTP1_SORBI Non-specific lipid-transfer protein 1 OS=S... 31 2.2
>sp|Q41073|NLTP_PINTA Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1 Length = 123
Score = 38.9 bits (89), Expect = 0.008 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 G+++C + PC +YL + PAA +CC ++ L++Q + RQ VC C+ Sbjct: 30 GAISCNQVVSAMTPCATYLIGNAATPAA---TCCPSIRGLDSQVKATPDRQAVCNCL 83
>sp|Q9LDB4|NLTP6_ARATH Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1 Length = 113
Score = 37.7 bits (86), Expect = 0.018 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 +V+C ++ PC SY+T P CC + L +Q Q + RQGVC CI Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL----CCNGLTTLKSQAQTSVDRQGVCRCI 71
>sp|Q2QYL3|NLTP3_ORYSJ Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1 Length = 121
Score = 37.0 bits (84), Expect = 0.030 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQ-FQGLKRQGVCECI 291 +V+C + PC SY+ R ++PS SCC+ V LN + R+ C C+ Sbjct: 29 AVSCGDVTSSIAPCLSYVMG---RESSPSSSCCSGVRTLNGKASSSADRRTACSCL 81
>sp|A2ZAS9|NLTP3_ORYSI Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1 Length = 121
Score = 37.0 bits (84), Expect = 0.030 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQ-FQGLKRQGVCECI 291 +V+C + PC SY+ R ++PS SCC+ V LN + R+ C C+ Sbjct: 29 AVSCGDVTSSIAPCLSYVMG---RESSPSSSCCSGVRTLNGKASSSADRRTACSCL 81
>sp|Q42641|NLTPA_BRAOT Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1 Length = 118
Score = 36.2 bits (82), Expect = 0.051 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 ++ C ++N PC Y+T P A CCT V LN+ + RQ C C+ Sbjct: 26 ALTCGTVNSNVAPCIGYITQGGTLPGA----CCTGVSKLNSMARTTPDRQQACRCL 77
>sp|P07597|NLTP1_HORVU Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1 Length = 117
Score = 35.8 bits (81), Expect = 0.067 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 ++NC ++ K PC +Y+ PS CC V L+ Q Q RQ VC C+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQG----GPGPSGECCNGVRDLHNQAQSSGDRQTVCNCL 77
>sp|Q9ZUK6|NLTP7_ARATH Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1 Length = 123
Score = 35.4 bits (80), Expect = 0.088 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQ-FQGLKRQGVCECI 291 +++C +N PC YLT+ + +P CC V LN L R+ C CI Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGI--TSPGPQCCNGVRKLNGMVLTTLDRRQACRCI 79
>sp|P10973|NLTPA_RICCO Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1 Length = 92
Score = 35.0 bits (79), Expect = 0.11 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1
Query: 130 VNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQF-QGLKRQGVCECI 291 V+C +N C +LT A+PS SCC V L T R+ CECI Sbjct: 1 VDCGQVNSSLASCIPFLTGGV---ASPSASCCAGVQNLKTLAPTSADRRAACECI 52
>sp|Q39950|NLTP_HELAN Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1 Length = 116
Score = 34.7 bits (78), Expect = 0.15 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 +++C ++ PC SYLT P A CC+ V +LN+ + RQ C C+ Sbjct: 25 ALSCGQVSSSLAPCISYLTKGGAVPPA----CCSGVKSLNSAAKTTPDRQAACGCL 76
>sp|O24418|NLTP6_GOSHI Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1 Length = 120
Score = 33.5 bits (75), Expect = 0.33 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+++ + +PC Y+ + RPA P+ C + +L + + L RQ C+CI Sbjct: 26 GAISYDQVKSSLLPCVGYVRGNNARPAPPNY--CKGIRSLKSAARIRLDRQAACKCI 80
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7EZR3 |
Definition |
tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza sativa subsp. japonica |
Align length |
57 |
Score (bit) |
43.5 |
E-value |
0.005 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920624|Adiantum capillus-veneris mRNA, clone: YMU001_000139_D09. (293 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Or... 44 0.005 tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Or... 44 0.005 tr|A9NY54|A9NY54_PICSI Non-specific lipid-transfer protein OS=Pi... 43 0.009 tr|A9NL65|A9NL65_PICSI Non-specific lipid-transfer protein OS=Pi... 43 0.009 tr|Q2PCB9|Q2PCB9_WHEAT Non-specific lipid-transfer protein OS=Tr... 42 0.012 tr|Q2PCD4|Q2PCD4_WHEAT Non-specific lipid-transfer protein OS=Tr... 41 0.026 tr|A9NPT8|A9NPT8_PICSI Non-specific lipid-transfer protein OS=Pi... 40 0.044 tr|Q5NE30|Q5NE30_WHEAT Non-specific lipid-transfer protein OS=Tr... 40 0.058 tr|Q2PCD7|Q2PCD7_WHEAT Non-specific lipid-transfer protein OS=Tr... 40 0.058 tr|Q2PCE0|Q2PCE0_WHEAT Non-specific lipid-transfer protein OS=Tr... 40 0.076 tr|Q5NE33|Q5NE33_WHEAT Non-specific lipid-transfer protein OS=Tr... 39 0.13 tr|A9NP97|A9NP97_PICSI Non-specific lipid-transfer protein OS=Pi... 39 0.17 tr|A9NKX9|A9NKX9_PICSI Non-specific lipid-transfer protein OS=Pi... 39 0.17 tr|A9NKD5|A9NKD5_PICSI Non-specific lipid-transfer protein OS=Pi... 39 0.17 tr|Q9AXZ6|Q9AXZ6_PINRE Non-specific lipid-transfer protein OS=Pi... 38 0.22 tr|Q2PCD9|Q2PCD9_WHEAT Non-specific lipid-transfer protein OS=Tr... 38 0.22 tr|Q9M6B8|Q9M6B8_GOSHI Non-specific lipid-transfer protein OS=Go... 38 0.29 tr|A9NY14|A9NY14_PICSI Non-specific lipid-transfer protein OS=Pi... 38 0.29 tr|A9NLQ3|A9NLQ3_PICSI Non-specific lipid-transfer protein OS=Pi... 38 0.29 tr|A9NJW4|A9NJW4_PICSI Non-specific lipid-transfer protein OS=Pi... 38 0.29 tr|Q8GT85|Q8GT85_GOSBA Non-specific lipid-transfer protein OS=Go... 37 0.37 tr|Q6R8K5|Q6R8K5_GOSBA Non-specific lipid-transfer protein OS=Go... 37 0.37 tr|O49200|O49200_GOSHI Non-specific lipid-transfer protein OS=Go... 37 0.37 tr|A9NRV2|A9NRV2_PICSI Non-specific lipid-transfer protein OS=Pi... 37 0.37 tr|A9NKV1|A9NKV1_PICSI Non-specific lipid-transfer protein OS=Pi... 37 0.37 tr|A7TUG4|A7TUG4_GOSHI Lipid transfer protein OS=Gossypium hirsu... 37 0.37 tr|Q9M6A6|Q9M6A6_AERJP Non-specific lipid-transfer protein OS=Ae... 37 0.49 tr|B7E4W9|B7E4W9_ORYSJ cDNA clone:001-002-F05, full insert seque... 37 0.49 tr|Q9M6B7|Q9M6B7_GOSHI Non-specific lipid-transfer protein OS=Go... 37 0.64 tr|B8A3E0|B8A3E0_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.64
>tr|Q7EZR3|Q7EZR3_ORYSJ Non-specific lipid-transfer protein OS=Oryza sativa subsp. japonica GN=P0582D05.140 PE=3 SV=1 Length = 120
Score = 43.5 bits (101), Expect = 0.005 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQG-LKRQGVCECI 291 G+V C ++ +PC +YLT K+ AAPS CC V L T G +R+ C+C+ Sbjct: 27 GAVTCGDVDASLLPCVAYLTGKA---AAPSGDCCAGVRHLRTLPVGTAERRFACDCV 80
>tr|A2YQX8|A2YQX8_ORYSI Non-specific lipid-transfer protein OS=Oryza sativa subsp. indica GN=OsI_27706 PE=3 SV=1 Length = 169
Score = 43.5 bits (101), Expect = 0.005 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQG-LKRQGVCECI 291 G+V C ++ +PC +YLT K+ AAPS CC V L T G +R+ C+C+ Sbjct: 27 GAVTCGDVDASLLPCVAYLTGKA---AAPSGDCCAGVRHLRTLPVGTAERRFACDCV 80
>tr|A9NY54|A9NY54_PICSI Non-specific lipid-transfer protein OS=Picea sitchensis PE=3 SV=1 Length = 118
Score = 42.7 bits (99), Expect = 0.009 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 +++C ++ +PC SY+T + A+P+ +CC V ALN Q RQ C+CI Sbjct: 27 AISCSTVISDLVPCLSYVTGSA---ASPTAACCNGVKALNAAAQTTPDRQAACKCI 79
>tr|A9NL65|A9NL65_PICSI Non-specific lipid-transfer protein OS=Picea sitchensis PE=3 SV=1 Length = 118
Score = 42.7 bits (99), Expect = 0.009 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 +++C ++ +PC SY+T + A+P+ +CC V ALN Q RQ C+CI Sbjct: 27 AISCSTVISDLVPCLSYVTGSA---ASPTAACCNGVKALNAAAQTTPDRQAACKCI 79
>tr|Q2PCB9|Q2PCB9_WHEAT Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3d PE=3 SV=1 Length = 117
Score = 42.4 bits (98), Expect = 0.012 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+V C + PC SY T K+ +APS CC+ V LN + RQ C C+ Sbjct: 24 GAVTCGDVTSAIAPCMSYATGKA---SAPSAGCCSGVRTLNGKASTSADRQAACRCL 77
>tr|Q2PCD4|Q2PCD4_WHEAT Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3g PE=3 SV=1 Length = 115
Score = 41.2 bits (95), Expect = 0.026 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+V C + PC SY T ++ +APS CC+ V LN + RQ C C+ Sbjct: 24 GAVTCGDVTSAVAPCMSYATGQT---SAPSAGCCSGVRTLNAKASTSADRQAACRCL 77
>tr|A9NPT8|A9NPT8_PICSI Non-specific lipid-transfer protein OS=Picea sitchensis PE=3 SV=1 Length = 118
Score = 40.4 bits (93), Expect = 0.044 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1
Query: 127 SVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQGL-KRQGVCECI 291 +++C ++ +PC SY+T + A+P +CC V LN Q RQ C+CI Sbjct: 27 AISCSTVIADLVPCLSYVTGSA---ASPPAACCNGVKTLNAAAQTTPDRQAACKCI 79
>tr|Q5NE30|Q5NE30_WHEAT Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3 PE=3 SV=1 Length = 117
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+V C + PC SY T ++ ++PS CC+ V LN + RQ C C+ Sbjct: 24 GAVTCSDVTSAIAPCMSYATGQA---SSPSAGCCSGVRTLNGKASTSADRQAACRCL 77
>tr|Q2PCD7|Q2PCD7_WHEAT Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3e PE=3 SV=1 Length = 117
Score = 40.0 bits (92), Expect = 0.058 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+V C + PC SY T ++ ++PS CC+ V LN + RQ C C+ Sbjct: 24 GAVTCSDVTSAIAPCMSYATGQA---SSPSAGCCSGVRTLNGKASTSADRQAACRCL 77
>tr|Q2PCE0|Q2PCE0_WHEAT Non-specific lipid-transfer protein OS=Triticum aestivum GN=ltp9.3b PE=3 SV=1 Length = 117
Score = 39.7 bits (91), Expect = 0.076 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1
Query: 124 GSVNCVSINFKFIPCFSYLTDKSLRPAAPSQSCCTNVMALNTQFQ-GLKRQGVCECI 291 G+V C + PC SY T ++ ++PS CC+ V LN + RQ C C+ Sbjct: 24 GAVTCGDVTSAIAPCMSYATGQA---SSPSAGCCSGVRTLNGKASTSADRQAACRCL 77
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