BP920626 |
Clone id |
YMU001_000139_D11 |
Library |
YMU01 |
Length |
349 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_D11. |
Accession |
BP920626 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTGGCTTTTAAGCATGACCAGGTTTCCTTTCTTTATTAGACAAGAACCATGTGCAAAAAT AGTAGTGTAACCCAAATCGTCTAATTGCCCAGCAAACAACAAACTCTTTGTCAATTTGGG TACATGTCTAACATTCTGCAACATAATCTCGGTGCCATTCCGCATACAAATTTTTGCGGC CCTAATACCACATATTTCAAGCCCATAAGAATTCTCCAACAACACTGTACCATGTATAGT AGTATATGTGGATAACCACTCCTTATGAGGAGTCACATGAAAACTAGGACACCTAAGTCC ACTATCCAATTCTAAGCATAAAACTCATCAAGAGCTAACAATGCATCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10978 |
Definition |
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum |
Align length |
94 |
Score (bit) |
49.7 |
E-value |
5.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8YLY7 |
Definition |
tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus |
Align length |
104 |
Score (bit) |
83.6 |
E-value |
5.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920626|Adiantum capillus-veneris mRNA, clone: YMU001_000139_D11. (349 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus PE... 84 5e-15 tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 81 3e-14 tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 81 3e-14 tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 81 3e-14 tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 81 3e-14 tr|A5AMT8|A5AMT8_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12 tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis... 73 6e-12 tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, wh... 72 1e-11 tr|A7QG92|A7QG92_VITVI Chromosome undetermined scaffold_91, whol... 72 1e-11 tr|A7NW85|A7NW85_VITVI Chromosome chr5 scaffold_2, whole genome ... 72 1e-11 tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BPZ5|A5BPZ5_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BPB3|A5BPB3_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BJQ3|A5BJQ3_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BFU1|A5BFU1_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5B0C8|A5B0C8_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5AQN2|A5AQN2_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5AK46|A5AK46_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A7P0C8|A7P0C8_VITVI Chromosome chr6 scaffold_3, whole genome ... 72 1e-11 tr|A7NUU2|A7NUU2_VITVI Chromosome chr18 scaffold_1, whole genome... 72 1e-11 tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5BKD2|A5BKD2_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11
>tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus PE=4 SV=1 Length = 1305
Score = 83.6 bits (205), Expect = 5e-15 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTTI-HGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 +DSG ++H+TP ++W TY + G V + N + LEI GI KI M +GT LQ Sbjct: 293 VDSGA---TWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQE 349
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRHV +L K+LL GQLDDLGY G + KG+LV++K++ Sbjct: 350 VRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAK 393
>tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatula PE=4 SV=1 Length = 1305
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTTI-HGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 +DSG ++H+TPH++W +Y I G+V + N + LEI G+ ++ M +GT +Q Sbjct: 293 MDSGA---TWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQG 349
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRHV L K+LL GQLDDLG G + KGNLV++K++ Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAE 393
>tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatula PE=4 SV=1 Length = 1305
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTTI-HGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 +DSG ++H+TPH++W +Y I G+V + N + LEI G+ ++ M +GT +Q Sbjct: 293 MDSGA---TWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQG 349
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRHV L K+LL GQLDDLG G + KGNLV++K++ Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAE 393
>tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatula PE=4 SV=1 Length = 1305
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTTI-HGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 +DSG ++H+TPH++W +Y I G+V + N + LEI G+ ++ M +GT +Q Sbjct: 293 MDSGA---TWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQG 349
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRHV L K+LL GQLDDLG G + KGNLV++K++ Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAE 393
>tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatula PE=4 SV=1 Length = 1305
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTTI-HGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 +DSG ++H+TPH++W +Y I G+V + N + LEI G+ ++ M +GT +Q Sbjct: 293 MDSGA---TWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQG 349
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRHV L K+LL GQLDDLG G + KGNLV++K++ Sbjct: 350 VRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAE 393
>tr|A5AMT8|A5AMT8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005778 PE=4 SV=1 Length = 1024
Score = 73.9 bits (180), Expect = 4e-12 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTT-IHGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 LDSG SFH TPH+E + Y G V L + L++ G+ +I + NG+ +L+ Sbjct: 205 LDSGA---SFHTTPHREIIQNYVVGDFGKVYLADGSALDVVGLGDVRISLPNGSIWLLEK 261
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVM 13 VRH+P L ++L++ GQLDD G+ +F G+ + KG V+ Sbjct: 262 VRHIPDLRRNLIYVGQLDDEGHVILFVGGTWKVTKGTRVL 301
>tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037436 PE=4 SV=1 Length = 1183
Score = 73.2 bits (178), Expect = 6e-12 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTT-IHGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 LDSG SFH TPH+E + Y G V L + L++ G+ +I + NG+ +L+ Sbjct: 251 LDSGA---SFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVCLLEK 307
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRH+P L ++L+ GQLDD G+ +F G+ + KG V+ + + Sbjct: 308 VRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGK 351
>tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009987001 PE=4 SV=1 Length = 466
Score = 72.4 bits (176), Expect = 1e-11 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTT-IHGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 LDSG SFH TPH+E + Y G V L + L++ G+ +I + NG+ +L+ Sbjct: 228 LDSGA---SFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEK 284
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRH+P L ++L+ GQLDD G+ +F G+ + KG V+ + + Sbjct: 285 VRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGK 328
>tr|A7QG92|A7QG92_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037749001 PE=4 SV=1 Length = 788
Score = 72.4 bits (176), Expect = 1e-11 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTT-IHGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 LDSG SFH TPH+E + Y G V L + L++ G+ +I + NG+ +L+ Sbjct: 571 LDSGA---SFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEK 627
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRH+P L ++L+ GQLDD G+ +F G+ + KG V+ + + Sbjct: 628 VRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGK 671
>tr|A7NW85|A7NW85_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019821001 PE=4 SV=1 Length = 617
Score = 72.4 bits (176), Expect = 1e-11 Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 1/104 (0%) Frame = -2
Query: 309 LDSGLRCPSFHVTPHKEWLSTYTT-IHGTVLLENSYGLEICGIRAAKICMRNGTEIMLQN 133 LDSG SFH TPH+E + Y G V L + L++ G+ +I + NG+ +L+ Sbjct: 224 LDSGA---SFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEK 280
Query: 132 VRHVPKLTKSLLFAGQLDDLGYTTIFAHGSCLIKKGNLVMLKSQ 1 VRH+P L ++L+ GQLDD G+ +F G+ + KG V+ + + Sbjct: 281 VRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGK 324
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