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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920635
Clone id YMU001_000139_E10
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATATCCACGAAGGTTTTGCCGGTTAGGTGATGATCAAATAATATGTACCCCTTCAAAGG
GAGAGCAACCAGCCAAAATAATCCTCCCACGTGCGCACCGGGTAGTCACACCAACAATAT
TCAGCATCTGCCATGATCTTTGCACAAACGATAAGCTAGAAATACAGACGCAGCTGCGCC
CACCATGGCCAACGTTGCCAAGGTATCCTCCTTTTCCCAGAAACTAAACCACCAGGATGC
TTGCCACCACATTGAGCTTGAGTAAGCCCTTCTCTTCTGTTGTGAATAATCATGGACTTT
AAAGAGCCTTTTCTGCCGCCCATCAACCTTTACATTGAACTGTCCGTTCACATTACCCAC
AACAAATTCATTATTTTGATGATCCCCATCCCGGTTTGAGTAAGACTCATCACTACATTC
CAGTGAGGAGCCCGTCGAAGGCTCCCGGCTCCCCCAATCC
■■Homology search results ■■ -
sp_hit_id A6H6T1
Definition sp|A6H6T1|TESP2_MOUSE Testicular serine protease 2 OS=Mus musculus
Align length 62
Score (bit) 31.2
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920635|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_E10.
         (460 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6H6T1|TESP2_MOUSE Testicular serine protease 2 OS=Mus muscul...    31   2.3  
sp|A8MTI9|YI033_HUMAN Putative serine protease LOC138652 OS=Homo...    30   6.6  
sp|A3DNI1|RL1_STAMF 50S ribosomal protein L1P OS=Staphylothermus...    30   6.6  
sp|P17460|RDRP_TCV Probable RNA-directed RNA polymerase OS=Turni...    30   6.6  
sp|A6NFY4|T194B_HUMAN Transmembrane protein 194B OS=Homo sapiens...    29   8.5  
sp|Q924N9|PRS28_MOUSE Serine protease 28 OS=Mus musculus GN=Prss...    29   8.6  
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus...    29   8.6  

>sp|A6H6T1|TESP2_MOUSE Testicular serine protease 2 OS=Mus musculus
           GN=Tesp2 PE=2 SV=1
          Length = 365

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -3

Query: 302 LKSMIIHNRREGLTQAQCGGKHPGGLVSGKRRIPWQRWPWWAQLRLYF*LIVCAKIMADA 123
           +KS +  +   G T+ Q  GK  GG ++G      +RWPW A LRLY    +C  ++ D 
Sbjct: 50  MKSTLSLSEVCGKTKFQ--GKIYGGQIAGA-----ERWPWQASLRLYG-RHICGAVLIDK 101

Query: 122 EY 117
            +
Sbjct: 102 NW 103


>sp|A8MTI9|YI033_HUMAN Putative serine protease LOC138652 OS=Homo
           sapiens PE=5 SV=2
          Length = 375

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 251 CGGKHPGGLVSGKRRIPWQRWPWWAQLRLYF*LIVCAKIMADAEYCW 111
           CG     G + G R     +WPW A L LY+   +C  ++ D+  CW
Sbjct: 72  CGKPKVVGKIYGGRDAAAGQWPWQASL-LYWGSHLCGAVLIDS--CW 115


>sp|A3DNI1|RL1_STAMF 50S ribosomal protein L1P OS=Staphylothermus
           marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl1p
           PE=3 SV=1
          Length = 215

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 24  LGDDQIICTPSKGEQPAKIILPRAHRVVT 110
           LG D+IIC  + GE   K     AHRV+T
Sbjct: 57  LGKDKIICVVADGEMAEKARAGGAHRVIT 85


>sp|P17460|RDRP_TCV Probable RNA-directed RNA polymerase OS=Turnip
           crinkle virus PE=4 SV=2
          Length = 775

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 15/56 (26%)
 Frame = +3

Query: 9   RRFCRLGDDQIICTP---------------SKGEQPAKIILPRAHRVVTPTIFSIC 131
           RR CRL DDQ I                  S+GE PA  + P A+      IF IC
Sbjct: 235 RRLCRLPDDQAISFVRXGCLRELVGRETQISRGENPAMRVFPLANPPKVRRIFHIC 290


>sp|A6NFY4|T194B_HUMAN Transmembrane protein 194B OS=Homo sapiens
           GN=TMEM194B PE=3 SV=3
          Length = 417

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 243 QASWWFSFWEKEDTLATLAMVGAAASVFLAYRLCK 139
           Q  WW   W     LATL + G AA+  L+ R CK
Sbjct: 5   QGRWWLLLWLPP--LATLPVRGEAAAAALSVRRCK 37


>sp|Q924N9|PRS28_MOUSE Serine protease 28 OS=Mus musculus GN=Prss28
           PE=1 SV=1
          Length = 274

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 236 PGGLVSGKRRIPWQRWPWWAQLRLY 162
           P G+V G+R  P  +WPW   LR+Y
Sbjct: 28  PVGIVGGQRTPPG-KWPWQVSLRMY 51


>sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus
           GN=PCLO PE=2 SV=1
          Length = 5120

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 348 SHYPQQIHYFDDPHPGLSKTHHYIPVRSPSKAPG 449
           +H+P+Q     DP PGLSK+     +++  +APG
Sbjct: 4   THHPRQPGKPPDPGPGLSKSRTVDVLKTEQRAPG 37
tr_hit_id B8LPX3
Definition tr|B8LPX3|B8LPX3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 44
Score (bit) 51.2
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920635|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_E10.
         (460 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LPX3|B8LPX3_PICSI Putative uncharacterized protein OS=Picea...    51   2e-05
tr|B6TCG6|B6TCG6_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.009
tr|B4FCF8|B4FCF8_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.009
tr|Q6Z5K5|Q6Z5K5_ORYSJ Os02g0725100 protein OS=Oryza sativa subs...    42   0.015
tr|B7EW17|B7EW17_ORYSJ cDNA clone:001-003-A01, full insert seque...    42   0.015
tr|A2X947|A2X947_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015
tr|B4FGB4|B4FGB4_MAIZE Putative uncharacterized protein OS=Zea m...    40   0.058
tr|Q9FG75|Q9FG75_ARATH Sucrose cleavage protein-like (At5g55900)...    39   0.17 
tr|B6TKT6|B6TKT6_MAIZE Sucrose cleavage protein-like OS=Zea mays...    39   0.17 
tr|Q9SUA2|Q9SUA2_ARATH Sucrase-like protein OS=Arabidopsis thali...    38   0.22 
tr|Q93Z67|Q93Z67_ARATH AT4g26620/T15N24_70 OS=Arabidopsis thalia...    38   0.22 
tr|Q8LFZ9|Q8LFZ9_ARATH Sucrase-like protein OS=Arabidopsis thali...    38   0.22 
tr|A7PM27|A7PM27_VITVI Chromosome chr14 scaffold_21, whole genom...    38   0.22 
tr|A7Q9A7|A7Q9A7_VITVI Chromosome chr19 scaffold_66, whole genom...    36   0.83 
tr|A5C0D9|A5C0D9_VITVI Putative uncharacterized protein OS=Vitis...    36   0.83 
tr|Q57D55|Q57D55_BRUAB Site-specific recombinase, resolvase fami...    33   5.4  
tr|Q2YPZ7|Q2YPZ7_BRUA2 Site-specific recombinase:Resolvase, N-te...    33   5.4  
tr|B2S5T6|B2S5T6_BRUA1 Resolvase, N-terminal OS=Brucella abortus...    33   5.4  
tr|B8CAD0|B8CAD0_THAPS Predicted protein OS=Thalassiosira pseudo...    33   5.4  

>tr|B8LPX3|B8LPX3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 435

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = -2

Query: 261 SSSMWWQASWWFSFWEKEDTLATLAMVGAAASVFLAYRLCKDHG 130
           S   W + S WF  WE+EDT ATLA++GA ASV +AY + +  G
Sbjct: 392 SKGCWGRVSMWFETWEREDTYATLAVIGAVASVAIAYSVYRRSG 435


>tr|B6TCG6|B6TCG6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 444

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE+ DT A LA+V AAA+VF+++R+ K+
Sbjct: 411 WFETWERADTYAALAVVAAAAAVFISFRIYKN 442


>tr|B4FCF8|B4FCF8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 446

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE+ DT A LA+V AAA+VF+++R+ K+
Sbjct: 413 WFETWERADTYAALAVVAAAAAVFISFRIYKN 444


>tr|Q6Z5K5|Q6Z5K5_ORYSJ Os02g0725100 protein OS=Oryza sativa subsp.
           japonica GN=P0685G12.41 PE=4 SV=1
          Length = 403

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE  DT A L +V AAASVF+A+R+ K+
Sbjct: 370 WFETWETADTYAALGIVAAAASVFVAFRIYKN 401


>tr|B7EW17|B7EW17_ORYSJ cDNA clone:001-003-A01, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 432

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE  DT A L +V AAASVF+A+R+ K+
Sbjct: 399 WFETWETADTYAALGIVAAAASVFVAFRIYKN 430


>tr|A2X947|A2X947_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08760 PE=4 SV=1
          Length = 403

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE  DT A L +V AAASVF+A+R+ K+
Sbjct: 370 WFETWETADTYAALGIVAAAASVFVAFRIYKN 401


>tr|B4FGB4|B4FGB4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 391

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE+ DT A LA+V AAA+V +++R+ K+
Sbjct: 358 WFETWERADTYAALAVVAAAAAVLVSFRIYKN 389


>tr|Q9FG75|Q9FG75_ARATH Sucrose cleavage protein-like (At5g55900)
           OS=Arabidopsis thaliana GN=At5g55900 PE=2 SV=1
          Length = 413

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = -2

Query: 237 SWWFSFWEKEDTLATLAMVGAAASVFLAYRLCK 139
           S W   WE+EDT A LA+  AAASV +AY   K
Sbjct: 378 SMWLETWEREDTYAALAVACAAASVAIAYNCYK 410


>tr|B6TKT6|B6TKT6_MAIZE Sucrose cleavage protein-like OS=Zea mays
           PE=2 SV=1
          Length = 391

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCKD 136
           WF  WE+ DT A LA+V AA +V +++R+ K+
Sbjct: 358 WFETWERADTYAALAVVAAATAVLVSFRIYKN 389


>tr|Q9SUA2|Q9SUA2_ARATH Sucrase-like protein OS=Arabidopsis thaliana
           GN=AT4g26620 PE=2 SV=1
          Length = 409

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -2

Query: 231 WFSFWEKEDTLATLAMVGAAASVFLAYRLCK 139
           W   WE+EDT A LA+V AAASV +AY   K
Sbjct: 377 WLESWEREDTYAALAVVCAAASVAVAYTCYK 407