BP920639
Clone id YMU001_000139_F02
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGTTATAATTGCATCATAATTAACGAATCAGTAGCACAAGCACTACATTTTACATTACA
AGTTGTGTATAAGCCAGAACCCCAAGACTGACGTCTCCAAAATTGAGTCACATGAACAAC
CTCAAATTGAACCTCTTAAACCAACAAACCGGAGCAAAAGGCTGGCCGAAAAGTGAGAAG
CTGCAACAAAGAATGCTCGTTTACGACGCAGTACCAAGAAGAAGAGGCTGTCCAAACACT
CTCCCAATCTCCAAGGTCATGTGAGGGAAATGGTCGGATTTTATGGCTTCATGAAAGACA
TATTACAAATTCCCCTGTTACAATTAGAGAACCCATAGCTGTGTAACATGGCGTGCCTTG
AAGGAATAAAACAGCCTATCCTGTGCGCCTCAATCTTTCATACCAAACTGATTTCAGGAT
TTGATGGAGGCAAAGAAGATGGTGGGCTCAAGTTTCCCACT
■■Homology search results ■■ -
sp_hit_id Q9R1S3
Definition sp|Q9R1S3|PIGN_MOUSE GPI ethanolamine phosphate transferase 1 OS=Mus musculus
Align length 47
Score (bit) 29.6
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920639|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F02.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9R1S3|PIGN_MOUSE GPI ethanolamine phosphate transferase 1 OS... 30 6.5

>sp|Q9R1S3|PIGN_MOUSE GPI ethanolamine phosphate transferase 1
OS=Mus musculus GN=Pign PE=2 SV=2
Length = 931

Score = 29.6 bits (65), Expect = 6.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = -3

Query: 216 WYCVVNEHSLLQ-----LLTF-RPAFCSGLLV*EVQFEVVHVTQFWR 94
WY V+ EH ++Q LLTF R F + LLV + EV+ ++ F+R
Sbjct: 519 WYAVLREHEVIQDLVESLLTFPRSHFVAYLLVFTLGIEVLVLSFFYR 565


tr_hit_id B6M007
Definition tr|B6M007|B6M007_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 78
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920639|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F02.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6M007|B6M007_BRAFL Putative uncharacterized protein (Fragmen... 36 1.1
tr|B6LZZ9|B6LZZ9_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4
tr|A8W457|A8W457_LOTJA DUF593-1 protein OS=Lotus japonicus PE=2 ... 33 5.4

>tr|B6M007|B6M007_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_216282 PE=4 SV=1
Length = 744

Score = 35.8 bits (81), Expect = 1.1
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = -3

Query: 237 VWTASSSWYCVV-----NEHSLLQLLTFRPAFCSGLLV*EVQFEVVHVTQF--WRRQSWG 79
VW S W NE + L +TF+PA C G F HV + W +
Sbjct: 252 VWVGSDGWGTTTEELSGNEMAALGAITFQPATCEG------SFTAFHVDRNNPWLGEMIA 305

Query: 78 SGLY--TTCNVKCSACAT 31
+G+ TTCN+ AC T
Sbjct: 306 AGMIQNTTCNLTTDACHT 323


>tr|B6LZZ9|B6LZZ9_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_216139 PE=4 SV=1
Length = 721

Score = 35.4 bits (80), Expect = 1.4
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = -3

Query: 237 VWTASSSWYCVV-----NEHSLLQLLTFRPAFCSGLLV*EVQFEVVHVTQF--WRRQSWG 79
VW S W NE + L +TF+PA C G F HV + W +
Sbjct: 230 VWVGSDGWGTTTDELSGNELAALGAITFQPATCEG------SFAAFHVDRNNPWLGEMIA 283

Query: 78 SGLY--TTCNVKCSACAT 31
+G+ TTCN+ AC T
Sbjct: 284 AGMIQNTTCNLTTDACHT 301


>tr|A8W457|A8W457_LOTJA DUF593-1 protein OS=Lotus japonicus PE=2
SV=1
Length = 271

Score = 33.5 bits (75), Expect = 5.4
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2

Query: 194 CSFTTQYQEEEAVQTLSQSPRSC 262
C+F+ +Y + +++TLSQSPRSC
Sbjct: 249 CNFSVEYDLDASLETLSQSPRSC 271