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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920640
Clone id YMU001_000139_F03
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTAAACAAAGCCGCAACTGGCAGTCAGTCACCCTGCATATTCTAGTATTATGAA
TTAACTCACAAAATTTCCATTGTACCATGTGCATTAGTGTCTCTCTTAGAACAAAATTTC
CAATGCGGTGTGTACACCACCATCGTCCCATCTTCCTGAGACTTCATATGCCTCCACCTT
TTTGATAAAATAGCCGCAAAGCTGACATATAACAAAAATTTTGCTTTATTGCTTTGCCAT
GAGATTGCAGTAACAGCACAGCAATGGCGATGAAACTAAGGAGCCATTATTGCATTTATG
GTGTACGCGAGAGATTCTGCCATGTCCTGGTTTAGGAGAAGCTTTTGAAGAGTGTGCATC
ATATTGAAATCAGGATCAAGCTTGCTCTGCCAGCCTTCTAGAACCATCATGGTGACCATC
ACTGTGCAAACATCACCATCAATGTTAACTCTGTGTGTTCTCACTTGCTCTAAAACATCT
TGCATGCACTCTCCTGGATGAATAACCTTTGCCTCTTTA
■■Homology search results ■■ -
sp_hit_id Q02981
Definition sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial OS=Saccharomyces cerevisiae
Align length 53
Score (bit) 39.3
E-value 0.011
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920640|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F03.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial...    39   0.011
sp|Q6NSR3|ADCK2_MOUSE Uncharacterized aarF domain-containing pro...    38   0.025
sp|Q7Z695|ADCK2_HUMAN Uncharacterized aarF domain-containing pro...    38   0.032
sp|Q9P7M0|YOS3_SCHPO ABC1 family protein C21C3.03, mitochondrial...    33   1.0  
sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2      33   1.1  
sp|Q7TSL3|FBX11_RAT F-box only protein 11 OS=Rattus norvegicus G...    30   6.8  
sp|Q7TPD1|FBX11_MOUSE F-box only protein 11 OS=Mus musculus GN=F...    30   6.8  
sp|Q86XK2|FBX11_HUMAN F-box only protein 11 OS=Homo sapiens GN=F...    30   6.8  

>sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial
           OS=Saccharomyces cerevisiae GN=YPL109C PE=1 SV=2
          Length = 657

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 16/53 (30%), Positives = 33/53 (62%)
 Frame = -2

Query: 494 GECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           G+ +  +L  VR+H V ++ D  +V+V +++LEG   +LDP+ ++  +   +L
Sbjct: 551 GDLLDQMLSMVRSHHVRMESDFVSVVVAILLLEGIGRQLDPNLDLFESSLPIL 603


>sp|Q6NSR3|ADCK2_MOUSE Uncharacterized aarF domain-containing
           protein kinase 2 OS=Mus musculus GN=Adck2 PE=2 SV=1
          Length = 617

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = -2

Query: 503 IHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           +H    +  V + + TH+V ++ +  +++V +MVLEG    LDP  +++   +  L
Sbjct: 554 LHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGRSLDPTLDILEAAKPFL 609


>sp|Q7Z695|ADCK2_HUMAN Uncharacterized aarF domain-containing
           protein kinase 2 OS=Homo sapiens GN=ADCK2 PE=2 SV=1
          Length = 626

 Score = 37.7 bits (86), Expect = 0.032
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = -2

Query: 503 IHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLLL 333
           +H    +  V + + TH+V ++ +  +++  +MVLEG    LDP  +++   +  LL
Sbjct: 563 LHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLL 619


>sp|Q9P7M0|YOS3_SCHPO ABC1 family protein C21C3.03, mitochondrial
           OS=Schizosaccharomyces pombe GN=SPBC21C3.03 PE=2 SV=1
          Length = 674

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 14/70 (20%), Positives = 36/70 (51%)
 Frame = -2

Query: 509 KVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLLLN 330
           K +  G  +Q+V+   R H V I+ +    +++++++EG   +L P+ +++      L +
Sbjct: 567 KSLQIGTILQEVMTMAREHHVRIEANFANTVLSILLVEGAGRQLYPEMDLLSNATPYLRS 626

Query: 329 QDMAESLAYT 300
                +++ T
Sbjct: 627 ASSKSNVSLT 636


>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
          Length = 1214

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -1

Query: 303 HHKCNNGSLVSSPLLCCYCNLMAKQ*SKIFVICQLCGYFIKKVEAYEV----SGRW 148
           H+K +  +LV    +CC CN    Q S + + C +C   + + E Y V     G+W
Sbjct: 261 HNKGDPNALVDEDAVCCICNDGECQNSNVILFCDMCNLAVHQ-ECYGVPYIPEGQW 315


>sp|Q7TSL3|FBX11_RAT F-box only protein 11 OS=Rattus norvegicus
           GN=Fbxo11 PE=2 SV=1
          Length = 843

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 405 HHGDHHCANITINVNSVCSHLL 470
           HH  HHC  IT+N + +  H +
Sbjct: 273 HHNAHHCLEITVNCSPIIDHCI 294


>sp|Q7TPD1|FBX11_MOUSE F-box only protein 11 OS=Mus musculus
           GN=Fbxo11 PE=2 SV=2
          Length = 843

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 405 HHGDHHCANITINVNSVCSHLL 470
           HH  HHC  IT+N + +  H +
Sbjct: 273 HHNAHHCLEITVNCSPIIDHCI 294


>sp|Q86XK2|FBX11_HUMAN F-box only protein 11 OS=Homo sapiens
           GN=FBXO11 PE=1 SV=3
          Length = 927

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 405 HHGDHHCANITINVNSVCSHLL 470
           HH  HHC  IT+N + +  H +
Sbjct: 357 HHNAHHCLEITVNCSPIIDHCI 378
tr_hit_id B8LL04
Definition tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 79
Score (bit) 116.0
E-value 6.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920640|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F03.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea...   116   6e-25
tr|B6U2C9|B6U2C9_MAIZE Protein kinase-like OS=Zea mays PE=2 SV=1      115   1e-24
tr|Q8S3N5|Q8S3N5_ORYSJ Putative 62.8 kDa protein (Putative uncha...   115   1e-24
tr|Q7XR01|Q7XR01_ORYSJ OSJNBa0015K02.12 protein OS=Oryza sativa ...   115   1e-24
tr|Q2HTV1|Q2HTV1_MEDTR Protein kinase-like OS=Medicago truncatul...   115   1e-24
tr|Q0J9D1|Q0J9D1_ORYSJ Os04g0660200 protein (Fragment) OS=Oryza ...   115   1e-24
tr|Q01JL8|Q01JL8_ORYSA H0112G12.2 protein OS=Oryza sativa GN=H01...   115   1e-24
tr|B7F5N2|B7F5N2_ORYSJ cDNA clone:J013044B08, full insert sequen...   115   1e-24
tr|A2XYJ4|A2XYJ4_ORYSI Putative uncharacterized protein OS=Oryza...   115   1e-24
tr|A9SKE9|A9SKE9_PHYPA Predicted protein OS=Physcomitrella paten...   114   2e-24
tr|A7R084|A7R084_VITVI Chromosome undetermined scaffold_298, who...   114   3e-24
tr|Q9LPZ6|Q9LPZ6_ARATH T23J18.5 OS=Arabidopsis thaliana PE=4 SV=1     113   6e-24
tr|Q9SY86|Q9SY86_ARATH T25B24.1 protein OS=Arabidopsis thaliana ...   102   1e-20
tr|Q8L6Y8|Q8L6Y8_ARATH Putative uncharacterized protein At1g6164...   102   1e-20
tr|Q6Z415|Q6Z415_ORYSJ Os07g0558000 protein OS=Oryza sativa subs...    95   2e-18
tr|B8B7J1|B8B7J1_ORYSI Putative uncharacterized protein OS=Oryza...    95   2e-18
tr|A3BL36|A3BL36_ORYSJ Putative uncharacterized protein OS=Oryza...    95   2e-18
tr|B7ZWW5|B7ZWW5_MAIZE Putative uncharacterized protein OS=Zea m...    93   7e-18
tr|A9S7E7|A9S7E7_PHYPA Predicted protein (Fragment) OS=Physcomit...    90   6e-17
tr|A9S7D2|A9S7D2_PHYPA Predicted protein OS=Physcomitrella paten...    88   3e-16
tr|A8HQL6|A8HQL6_CHLRE Predicted protein (Fragment) OS=Chlamydom...    54   4e-06
tr|Q00VK5|Q00VK5_OSTTA Predicted unusual protein kinase (ISS) OS...    51   4e-05
tr|A4S6Z2|A4S6Z2_OSTLU Predicted protein OS=Ostreococcus lucimar...    51   4e-05
tr|A8IBE0|A8IBE0_CHLRE Predicted protein OS=Chlamydomonas reinha...    49   1e-04
tr|A4RPS3|A4RPS3_MAGGR Putative uncharacterized protein OS=Magna...    47   7e-04
tr|A5E4D1|A5E4D1_LODEL ABC1 family protein OS=Lodderomyces elong...    46   0.001
tr|Q2GTH6|Q2GTH6_CHAGB Putative uncharacterized protein OS=Chaet...    45   0.002
tr|A6SFK8|A6SFK8_BOTFB Putative uncharacterized protein OS=Botry...    45   0.002
tr|A1C907|A1C907_ASPCL Ubiquinone biosynthesis protein, putative...    45   0.002
tr|A5DGL5|A5DGL5_PICGU Putative uncharacterized protein OS=Pichi...    45   0.003

>tr|B8LL04|B8LL04_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 657

 Score =  116 bits (291), Expect = 6e-25
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E  V+HP ECMQ++LE VR H+VNIDG+VCTVMVT +VLEGWQ KLDPDFN+M+TL  +L
Sbjct: 579 EGDVVHPAECMQELLEHVRHHKVNIDGNVCTVMVTTLVLEGWQRKLDPDFNVMNTLHTVL 638

Query: 335 LNQDMAESLAYTINAIMAP 279
           +  D A+SL+YTI  +MAP
Sbjct: 639 IRSDWAKSLSYTIEELMAP 657


>tr|B6U2C9|B6U2C9_MAIZE Protein kinase-like OS=Zea mays PE=2 SV=1
          Length = 625

 Score =  115 bits (289), Expect = 1e-24
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   IHP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 547 EGDAIHPAECMHQLLEQVRCHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 606

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 607 FKEDWAKSLQYTIQGLMAP 625


>tr|Q8S3N5|Q8S3N5_ORYSJ Putative 62.8 kDa protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=24K23.22 PE=4 SV=1
          Length = 694

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 616 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 675

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 676 FKEDWAKSLQYTIEGLMAP 694


>tr|Q7XR01|Q7XR01_ORYSJ OSJNBa0015K02.12 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0015K02.12 PE=4 SV=1
          Length = 694

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 616 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 675

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 676 FKEDWAKSLQYTIEGLMAP 694


>tr|Q2HTV1|Q2HTV1_MEDTR Protein kinase-like OS=Medicago truncatula
           GN=MtrDRAFT_AC149642g9v2 PE=4 SV=1
          Length = 630

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = -2

Query: 518 KEAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKL 339
           +E   +HP ECM+ +LE+VR HRVNIDG+VCTVMVT +VLEGWQ KLDP +N+M TLQ L
Sbjct: 551 REGDAVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDPGYNVMETLQTL 610

Query: 338 LLNQDMAESLAYTINAIMAP 279
           LL  D A+S AYTI ++MAP
Sbjct: 611 LLRADWAKSFAYTIQSLMAP 630


>tr|Q0J9D1|Q0J9D1_ORYSJ Os04g0660200 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os04g0660200 PE=4 SV=1
          Length = 662

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 584 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 643

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 644 FKEDWAKSLQYTIEGLMAP 662


>tr|Q01JL8|Q01JL8_ORYSA H0112G12.2 protein OS=Oryza sativa
           GN=H0112G12.2 PE=4 SV=1
          Length = 694

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 616 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 675

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 676 FKEDWAKSLQYTIEGLMAP 694


>tr|B7F5N2|B7F5N2_ORYSJ cDNA clone:J013044B08, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 629

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 551 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 610

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 611 FKEDWAKSLQYTIEGLMAP 629


>tr|A2XYJ4|A2XYJ4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17767 PE=4 SV=1
          Length = 694

 Score =  115 bits (288), Expect = 1e-24
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -2

Query: 515 EAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKLL 336
           E   +HP ECM  +LEQVR H+VNIDG+VCTVMVT +VLEGWQ KLDPD+N+M TLQ LL
Sbjct: 616 EGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 675

Query: 335 LNQDMAESLAYTINAIMAP 279
             +D A+SL YTI  +MAP
Sbjct: 676 FKEDWAKSLQYTIEGLMAP 694


>tr|A9SKE9|A9SKE9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_213247 PE=4 SV=1
          Length = 492

 Score =  114 bits (286), Expect = 2e-24
 Identities = 51/80 (63%), Positives = 64/80 (80%)
 Frame = -2

Query: 518 KEAKVIHPGECMQDVLEQVRTHRVNIDGDVCTVMVTMMVLEGWQSKLDPDFNMMHTLQKL 339
           +E   +H G+CMQ++LEQVR HRVNIDGDVCTVMVT +VLEGWQ KLDP+ N+M TL++L
Sbjct: 413 EEGNALHTGDCMQELLEQVRRHRVNIDGDVCTVMVTTLVLEGWQRKLDPELNIMDTLRQL 472

Query: 338 LLNQDMAESLAYTINAIMAP 279
           L   D   SL+YTI+ +MAP
Sbjct: 473 LFKADWVNSLSYTIDGVMAP 492