BP920643 |
Clone id |
YMU001_000139_F07 |
Library |
YMU01 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_F07. |
Accession |
BP920643 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2246Contig1 |
Sequence |
TAGATATTACCTGCAGGTACTCATGCATGTAAGCGACGGAATCAAACTCGGTCGCAATCT CTTCTTCAATGAGATTATCAGCCTCAAACTCTTTTCTCCAGAAAACAGTGTCCTTCAGCA TGGACATGGCATCATTGACCTTAAAATCTCTTGCACGCAGGAATTTGAGCAAGACGACAT TTGTGCTCTCATCACCCTTGGTATGAAGTAATGGAACACCCCACAGGCAGAGGTCCTCAA GGGAAGGAGTCTCATCTTCTGCTTCAATAGGTATATCTCTGTCATGGGATGGGAGAGGTT CGACCTCGAGAGTGGATGGAACGATCATCTTCTCTTCTTCTGCAAGAGAGGCACTCACTT CCTCAACTGCAAGGGGGGCTACCTCAGGAACCAAGGGAGTAGTAGTAACAGCTACTTCCT CTGCACCAGCAACAACTGGTGTCTCTATAATAGCGGGCACCTCTCCAAACAGGTCCCCTT CTGCCTTCACTTCCTTTTCCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94C59 |
Definition |
sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana |
Align length |
83 |
Score (bit) |
94.7 |
E-value |
2.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQX3 |
Definition |
tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
83 |
Score (bit) |
110.0 |
E-value |
4.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920643|Adiantum capillus-veneris mRNA, clone: YMU001_000139_F07. (503 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea... 110 4e-23 tr|A7Q4T0|A7Q4T0_VITVI Chromosome chr10 scaffold_50, whole genom... 93 8e-18 tr|A5BW68|A5BW68_VITVI Putative uncharacterized protein OS=Vitis... 93 8e-18 tr|A7Q1S9|A7Q1S9_VITVI Chromosome chr7 scaffold_44, whole genome... 91 2e-17 tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis... 90 5e-17 tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=... 90 7e-17 tr|A7QLW9|A7QLW9_VITVI Chromosome chr18 scaffold_122, whole geno... 86 1e-15 tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whol... 86 1e-15 tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis... 86 1e-15 tr|Q2PF01|Q2PF01_TRIPR Putative cytosolic factor OS=Trifolium pr... 84 5e-15 tr|Q9LEN5|Q9LEN5_CICAR Putative uncharacterized protein (Fragmen... 80 7e-14 tr|A7PKK5|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome... 80 7e-14 tr|Q76H02|Q76H02_SOLME Putative uncharacterized protein 5E08 (Fr... 79 2e-13 tr|B7FL90|B7FL90_MEDTR Putative uncharacterized protein OS=Medic... 76 8e-13 tr|A7QFG3|A7QFG3_VITVI Chromosome chr8 scaffold_88, whole genome... 75 1e-12 tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole geno... 75 2e-12 tr|Q652I7|Q652I7_ORYSJ Os06g0671800 protein OS=Oryza sativa subs... 75 2e-12 tr|A2YG28|A2YG28_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|B6TB19|B6TB19_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 74 4e-12 tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequen... 73 9e-12 tr|A2WXH7|A2WXH7_ORYSI Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1 72 1e-11 tr|Q5TKJ2|Q5TKJ2_ORYSJ Os05g0429400 protein OS=Oryza sativa subs... 69 1e-10 tr|B8AYI6|B8AYI6_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea m... 67 6e-10 tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis... 66 8e-10 tr|B6U0S4|B6U0S4_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 64 5e-09 tr|A3A041|A3A041_ORYSJ Putative uncharacterized protein OS=Oryza... 63 7e-09 tr|Q5W6M0|Q5W6M0_ORYSJ Os05g0345100 protein OS=Oryza sativa subs... 61 3e-08 tr|B6T219|B6T219_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 61 3e-08
>tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 592
Score = 110 bits (275), Expect = 4e-23 Identities = 51/83 (61%), Positives = 63/83 (75%) Frame = -2
Query: 265 EAEDETPSLEDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKEF 86 EAE E D+ LWGVPLLHTKGDE T+V+LLKFLRARDFKV +A MLK+TV WRK F Sbjct: 239 EAETEKFRATDVYLWGVPLLHTKGDERTDVILLKFLRARDFKVQEAFEMLKNTVLWRKSF 298
Query: 85 EADNLIEEEIATEFDSVAYMHEY 17 + D+++EE+ + D VAYM+ Y Sbjct: 299 KTDSILEEDFGNDLDGVAYMNGY 321
>tr|A7Q4T0|A7Q4T0_VITVI Chromosome chr10 scaffold_50, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029827001 PE=4 SV=1 Length = 493
Score = 92.8 bits (229), Expect = 8e-18 Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 10/91 (10%) Frame = -2
Query: 265 EAEDETPSLE----------DLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSML 116 E ED+ S E D+ LWGVPLL +K E +V+LLKFLRAR+FKVN+A ML Sbjct: 128 EGEDKQSSSEVEKPEEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEML 187
Query: 115 KDTVFWRKEFEADNLIEEEIATEFDSVAYMH 23 K T+ WRKEF+ D+++EEE+ + SVAYM+ Sbjct: 188 KKTLEWRKEFKTDSILEEELGQDISSVAYMN 218
>tr|A5BW68|A5BW68_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004911 PE=4 SV=1 Length = 493
Score = 92.8 bits (229), Expect = 8e-18 Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 10/91 (10%) Frame = -2
Query: 265 EAEDETPSLE----------DLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSML 116 E ED+ S E D+ LWGVPLL +K E +V+LLKFLRAR+FKVN+A ML Sbjct: 128 EGEDKQSSSEVEKPEEVVDRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNEAFEML 187
Query: 115 KDTVFWRKEFEADNLIEEEIATEFDSVAYMH 23 K T+ WRKEF+ D+++EEE+ + SVAYM+ Sbjct: 188 KKTLEWRKEFKTDSILEEELGQDISSVAYMN 218
>tr|A7Q1S9|A7Q1S9_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028584001 PE=4 SV=1 Length = 419
Score = 91.3 bits (225), Expect = 2e-17 Identities = 38/81 (46%), Positives = 61/81 (75%) Frame = -2
Query: 265 EAEDETPSLEDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKEF 86 E++ +L D+ LWGVPLL +KG E T+++LLKFL+ARDFKV++A +ML+ T+ WR+EF Sbjct: 63 ESKKTQENLHDISLWGVPLLPSKGHEGTDIILLKFLKARDFKVSEAFNMLRRTLIWRREF 122
Query: 85 EADNLIEEEIATEFDSVAYMH 23 + + ++EE E ++V Y++ Sbjct: 123 KTEGILEENFGPELENVVYIN 143
>tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013162 PE=4 SV=1 Length = 591
Score = 90.1 bits (222), Expect = 5e-17 Identities = 40/92 (43%), Positives = 65/92 (70%) Frame = -2
Query: 292 PSHDRDIPIEAEDETPSLEDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLK 113 P+ + I + E+P+ ED+ +WG+PLL DE ++++LLKFLRAR+FKV +A +MLK Sbjct: 168 PTPNPTIESILKHESPTQEDVSIWGIPLLK---DERSDMILLKFLRAREFKVKEAFAMLK 224
Query: 112 DTVFWRKEFEADNLIEEEIATEFDSVAYMHEY 17 +T+FWRKEF D L+++++ + V +MH + Sbjct: 225 NTIFWRKEFGIDALVDDDLGEHLEKVVFMHGF 256
>tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=2 SV=1 Length = 604
Score = 89.7 bits (221), Expect = 7e-17 Identities = 43/96 (44%), Positives = 68/96 (70%), Gaps = 3/96 (3%) Frame = -2
Query: 301 EPLPSHDR-DIPIEAEDETPSL--EDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVND 131 E PS + ++ +EA + P E++ +WG+PLL GDE ++V+LLKFLRARDFKV D Sbjct: 238 ESAPSKEEAEVEVEAAEAVPPPPPEEVFIWGIPLL---GDERSDVILLKFLRARDFKVKD 294
Query: 130 AMSMLKDTVFWRKEFEADNLIEEEIATEFDSVAYMH 23 A +M+K+TV WRK+F+ + L++E++ ++D V + H Sbjct: 295 AFTMIKNTVRWRKQFDIEALLDEDLGNQWDKVVFSH 330
>tr|A7QLW9|A7QLW9_VITVI Chromosome chr18 scaffold_122, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001818001 PE=4 SV=1 Length = 440
Score = 85.9 bits (211), Expect = 1e-15 Identities = 38/86 (44%), Positives = 61/86 (70%) Frame = -2
Query: 268 IEAEDETPSLEDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKE 89 ++ E+P+ ED+ +WG+PLL DE ++++LLKFLRAR+FKV +A +MLK+T+FWRKE Sbjct: 101 LKQSHESPTQEDVSIWGIPLLK---DERSDMILLKFLRAREFKVKEAFAMLKNTIFWRKE 157
Query: 88 FEADNLIEEEIATEFDSVAYMHEYLQ 11 F D L+++++ + V + LQ Sbjct: 158 FGIDALVDDDLGEHLEKVVWPPSVLQ 183
>tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035683001 PE=4 SV=1 Length = 564
Score = 85.9 bits (211), Expect = 1e-15 Identities = 40/71 (56%), Positives = 54/71 (76%) Frame = -2
Query: 238 EDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKEFEADNLIEEE 59 E++ LWGVPLL +KGD+ T+V+LLKFLRAR+FKV +A ML++T+ W K+ D ++EEE Sbjct: 209 EEIKLWGVPLLPSKGDKGTDVILLKFLRAREFKVQEAFEMLRNTLKWIKDNNIDIILEEE 268
Query: 58 IATEFDSVAYM 26 E SVAYM Sbjct: 269 FPPELSSVAYM 279
>tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019134 PE=4 SV=1 Length = 564
Score = 85.9 bits (211), Expect = 1e-15 Identities = 40/71 (56%), Positives = 54/71 (76%) Frame = -2
Query: 238 EDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKEFEADNLIEEE 59 E++ LWGVPLL +KGD+ T+V+LLKFLRAR+FKV +A ML++T+ W K+ D ++EEE Sbjct: 209 EEIKLWGVPLLPSKGDKGTDVILLKFLRAREFKVQEAFEMLRNTLKWIKDNNIDIILEEE 268
Query: 58 IATEFDSVAYM 26 E SVAYM Sbjct: 269 FPPELSSVAYM 279
>tr|Q2PF01|Q2PF01_TRIPR Putative cytosolic factor OS=Trifolium pratense PE=2 SV=1 Length = 607
Score = 83.6 bits (205), Expect = 5e-15 Identities = 40/84 (47%), Positives = 59/84 (70%) Frame = -2
Query: 268 IEAEDETPSLEDLCLWGVPLLHTKGDESTNVVLLKFLRARDFKVNDAMSMLKDTVFWRKE 89 +E TP E++ +WG+PLL DE ++V+LLKFLRARDFKV +A +M+K TV WRKE Sbjct: 258 VEVTPTTP--EEVEIWGIPLL---ADERSDVILLKFLRARDFKVKEAYTMIKQTVIWRKE 312
Query: 88 FEADNLIEEEIATEFDSVAYMHEY 17 F + L++E++ T++D V + Y Sbjct: 313 FGIEALLQEDLGTDWDKVVFTDGY 336
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