BP920646
Clone id YMU001_000139_F10
Library
Length 279
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACTGTAACCTCGACACCATAAAGATCAGGACACCAGTTCCATGACGACAAAAACGTCATC
CTTGTATGGAGGGTCTTGGGGCAAAACTTCCTAACCTTCTTTGCCTACCTGCAAAATAGG
AGATTGTATGAATGACAGATAGCACAAGCAGGTCTATCTACGTCTATCAATACTAGCAGC
TTCAAGAAATGTAAGCCAACACTATGGGTTCCAAGCACAGTATGGATTACATTCTACTCA
TGACAATGACAAGCAGAAGGCGCACAATGCCTGATACAA
■■Homology search results ■■ -
sp_hit_id Q87RH3
Definition sp|Q87RH3|HEMH_VIBPA Ferrochelatase OS=Vibrio parahaemolyticus
Align length 32
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920646|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F10.
(279 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q87RH3|HEMH_VIBPA Ferrochelatase OS=Vibrio parahaemolyticus G... 30 4.9
sp|Q7MMR4|HEMH_VIBVY Ferrochelatase OS=Vibrio vulnificus (strain... 29 6.4
sp|Q8DFM2|HEMH_VIBVU Ferrochelatase OS=Vibrio vulnificus GN=hemH... 29 6.4

>sp|Q87RH3|HEMH_VIBPA Ferrochelatase OS=Vibrio parahaemolyticus
GN=hemH PE=3 SV=1
Length = 320

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2

Query: 104 AKKVRKFCPKTLHT-RMTFLSSWNWCPDLYGV 12
A V++F + LH R+ ++ W WCP L+GV
Sbjct: 22 APAVKRFLSQFLHDHRVVDMTRWLWCPILHGV 53


>sp|Q7MMR4|HEMH_VIBVY Ferrochelatase OS=Vibrio vulnificus (strain
YJ016) GN=hemH PE=3 SV=2
Length = 319

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2

Query: 104 AKKVRKFCPKTLHT-RMTFLSSWNWCPDLYGV 12
A V++F + LH R+ ++ W WCP L+G+
Sbjct: 22 APAVKRFLSQFLHDQRVVDMTRWLWCPILHGI 53


>sp|Q8DFM2|HEMH_VIBVU Ferrochelatase OS=Vibrio vulnificus GN=hemH
PE=3 SV=2
Length = 319

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2

Query: 104 AKKVRKFCPKTLHT-RMTFLSSWNWCPDLYGV 12
A V++F + LH R+ ++ W WCP L+G+
Sbjct: 22 APAVKRFLSQFLHDQRVVDMTRWLWCPILHGI 53


tr_hit_id B2UP91
Definition tr|B2UP91|B2UP91_AKKM8 Lipid-A-disaccharide synthase OS=Akkermansia muciniphila (strain ATCC BAA-835)
Align length 52
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920646|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_F10.
(279 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2UP91|B2UP91_AKKM8 Lipid-A-disaccharide synthase OS=Akkerman... 34 4.2

>tr|B2UP91|B2UP91_AKKM8 Lipid-A-disaccharide synthase OS=Akkermansia
muciniphila (strain ATCC BAA-835) GN=Amuc_2052 PE=4 SV=1
Length = 376

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2

Query: 188 FLKLLVLIDVDRPACAICHSYNLLFCR*AKKVRKFCPKTLHTRMTFLSSWNW 33
FL +L I D+P C + Y R A++VRK CP+T W W
Sbjct: 77 FLSILERIRQDQPDCLVLIDYPGFNLRLAERVRKCCPRTRIVYFISPQVWAW 128