BP920654 |
Clone id |
YMU001_000139_G11 |
Library |
YMU01 |
Length |
329 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_G11. |
Accession |
BP920654 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATATAATTCCTCTCTTGGCAAGCAACAAGACATTGAACAGAGACGTTGTCAATCAAGAGG GGAAAATCTGCCGAATGTCTCAGAAAATTTACAAACTTTGCCCTCAAGCAAAAGGAACTA GCTGTCCTTAATAGCTGCATCCCTTTCTGATTTCTCATCTCCTATAGACTCCGGTACAGA TGACACACTATCATGGCGCAAGAGGAAATTTGTGACAAATGGAAGGATCTCCTTTCTAGC CTCGCGTCCACAGACGAGATCGTAGTGGCCATAGTGAATATTTTTCTCCCCCCCAAACAG CTTGTACTCAACCAGCTTCTCTGGCAGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P15056 |
Definition |
sp|P15056|BRAF1_HUMAN B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens |
Align length |
88 |
Score (bit) |
32.3 |
E-value |
0.75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T780 |
Definition |
tr|A9T780|A9T780_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
37 |
Score (bit) |
58.2 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920654|Adiantum capillus-veneris mRNA, clone: YMU001_000139_G11. (314 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T780|A9T780_PHYPA Predicted protein (Fragment) OS=Physcomit... 58 2e-07 tr|B6SVG4|B6SVG4_MAIZE Putative uncharacterized protein OS=Zea m... 57 6e-07 tr|B4F9I4|B4F9I4_MAIZE Putative uncharacterized protein OS=Zea m... 57 6e-07 tr|Q5N7R5|Q5N7R5_ORYSJ Putative uncharacterized protein P0034C09... 53 9e-06 tr|Q0JK71|Q0JK71_ORYSJ Os01g0692600 protein OS=Oryza sativa subs... 53 9e-06 tr|A2ZWS5|A2ZWS5_ORYSJ Putative uncharacterized protein OS=Oryza... 53 9e-06 tr|A2WU05|A2WU05_ORYSI Putative uncharacterized protein OS=Oryza... 53 9e-06 tr|O23987|O23987_HORVU Expressed sequence tag (Fragment) OS=Hord... 52 1e-05 tr|Q9M9P9|Q9M9P9_ARATH T15D22.11 protein OS=Arabidopsis thaliana... 48 3e-04 tr|Q8RX69|Q8RX69_ARATH At1g15070/F9L1_1 (Putative uncharacterize... 48 3e-04 tr|Q67YM2|Q67YM2_ARATH Putative uncharacterized protein At1g1507... 48 3e-04 tr|A9SSW5|A9SSW5_PHYPA Predicted protein OS=Physcomitrella paten... 47 4e-04 tr|A7PGY7|A7PGY7_VITVI Chromosome chr17 scaffold_16, whole genom... 47 6e-04 tr|A5BVW5|A5BVW5_VITVI Putative uncharacterized protein OS=Vitis... 47 6e-04 tr|Q9C9T7|Q9C9T7_ARATH Putative uncharacterized protein F25P22.1... 46 8e-04 tr|Q8W568|Q8W568_ARATH At1g73750/F25P22_17 OS=Arabidopsis thalia... 46 8e-04 tr|Q6YZK1|Q6YZK1_ORYSJ cDNA clone:J023107D13, full insert sequen... 45 0.002 tr|Q0J671|Q0J671_ORYSJ Os08g0359300 protein OS=Oryza sativa subs... 45 0.002 tr|B8BA13|B8BA13_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A3BSD4|A3BSD4_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A7P3E1|A7P3E1_VITVI Chromosome chr1 scaffold_5, whole genome ... 44 0.004 tr|A4SBG4|A4SBG4_OSTLU Predicted protein OS=Ostreococcus lucimar... 41 0.026 tr|Q00VN8|Q00VN8_OSTTA Homology to unknown gene OS=Ostreococcus ... 40 0.076 tr|Q2IHF4|Q2IHF4_ANADE Alpha/beta hydrolase fold-1 OS=Anaeromyxo... 39 0.13 tr|B4UJ11|B4UJ11_ANASK Alpha/beta hydrolase fold OS=Anaeromyxoba... 36 0.84 tr|B8JCK0|B8JCK0_9DELT Alpha/beta hydrolase fold protein OS=Anae... 36 0.84 tr|Q0U786|Q0U786_PHANO Putative uncharacterized protein OS=Phaeo... 34 3.2 tr|Q1DF33|Q1DF33_MYXXD Hydrolase, alpha/beta fold family OS=Myxo... 34 4.2 tr|Q9JJU6|Q9JJU6_MOUSE B-Raf protein (Fragment) OS=Mus musculus ... 33 5.5 tr|Q1DCD0|Q1DCD0_MYXXD Hydrolase, alpha/beta fold family OS=Myxo... 33 5.5
>tr|A9T780|A9T780_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_11872 PE=4 SV=1 Length = 517
Score = 58.2 bits (139), Expect = 2e-07 Identities = 23/37 (62%), Positives = 30/37 (81%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFL 202 V YKLFGGE + HYGHYDL+C R A++E+ P +T+FL Sbjct: 481 VTYKLFGGEDDRHYGHYDLLCSRTAKREVYPVITDFL 517
>tr|B6SVG4|B6SVG4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 592
Score = 56.6 bits (135), Expect = 6e-07 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FGG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 548 VTYKVFGGPEGPHYAHYDLVGGRKAVHEVYPCIIKFLFQHDEVSS 592
>tr|B4F9I4|B4F9I4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 479
Score = 56.6 bits (135), Expect = 6e-07 Identities = 25/45 (55%), Positives = 31/45 (68%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FGG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 435 VTYKVFGGPEGPHYAHYDLVGGRKAVHEVYPCIIKFLFQHDEVSS 479
>tr|Q5N7R5|Q5N7R5_ORYSJ Putative uncharacterized protein P0034C09.29 OS=Oryza sativa subsp. japonica GN=P0034C09.29 PE=4 SV=1 Length = 489
Score = 52.8 bits (125), Expect = 9e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 445 VTYKVFGKPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQHDEVSS 489
>tr|Q0JK71|Q0JK71_ORYSJ Os01g0692600 protein OS=Oryza sativa subsp. japonica GN=Os01g0692600 PE=4 SV=1 Length = 614
Score = 52.8 bits (125), Expect = 9e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 570 VTYKVFGKPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQHDEVSS 614
>tr|A2ZWS5|A2ZWS5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002997 PE=4 SV=1 Length = 629
Score = 52.8 bits (125), Expect = 9e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 585 VTYKVFGKPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQHDEVSS 629
>tr|A2WU05|A2WU05_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03352 PE=4 SV=1 Length = 596
Score = 52.8 bits (125), Expect = 9e-06 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 552 VTYKVFGKPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQHDEVSS 596
>tr|O23987|O23987_HORVU Expressed sequence tag (Fragment) OS=Hordeum vulgare PE=2 SV=1 Length = 108
Score = 52.0 bits (123), Expect = 1e-05 Identities = 24/45 (53%), Positives = 30/45 (66%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDSVSS 178 V YK+FG + HY HYDLV GR+A E+ P + FL +HD VSS Sbjct: 64 VIYKVFGEPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQHDDVSS 108
>tr|Q9M9P9|Q9M9P9_ARATH T15D22.11 protein OS=Arabidopsis thaliana GN=T15D22.11 PE=4 SV=1 Length = 55
Score = 47.8 bits (112), Expect = 3e-04 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDS 187 V YKL G HY HYDLV GR A +++ P +T FL HDS Sbjct: 13 VTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 54
>tr|Q8RX69|Q8RX69_ARATH At1g15070/F9L1_1 (Putative uncharacterized protein At1g15070) OS=Arabidopsis thaliana GN=At1g15070 PE=2 SV=1 Length = 578
Score = 47.8 bits (112), Expect = 3e-04 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -3
Query: 312 VEYKLFGGEKNIHYGHYDLVCGREARKEILPFVTNFLLRHDS 187 V YKL G HY HYDLV GR A +++ P +T FL HDS Sbjct: 536 VTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 577
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