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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920655
Clone id YMU001_000139_G12
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGCTCCTCAAGGGATGATGAGTGCGATGCTTCCAGTACCTTTGGAGATGGGAGGTATGCC
AGTTCCAGCAGCTGATGCTCAACCAATACCAATCAATGCCCTGGCGTCCGCACTTGCATC
AGCTCCACTCGAGCAACATAGAGTGATGTTGGGAGAGCAGCTTTACCCATTAGTTGACCA
AATTGAGCACGATCATGCGGGAAAAGTTACCGGAATGCTTTTGGAGATGGACCAGACCGA
GGTGCTACATTTGCTCGAGTCGCCAGAGGCCCTAAAAGCCAAAGTAAGGGAGGCTATGGA
AGTGCTGCAGCATGCCCAACCTGCGCTGCCCACAGACCAGCTTGGTGCTTTATCTCTAAA
CGATGCTCGCACGTCTTAAATTAAGGCTTGTGTGCTCGAGATATCTCCCTCCTTTTTGGC
TTTCTTGATTTTACCTGAGCAAGCTCCAGCACATTTCGGTATTTAAAGCTTTCTTGCCTG
AGGTTACATTTTGCCCAGACATTTTTAACTCTCTATTTTTCTAGTGAATTGTAG
■■Homology search results ■■ -
sp_hit_id P42731
Definition sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana
Align length 119
Score (bit) 103.0
E-value 4.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920655|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_G12.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...   103   4e-22
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    92   1e-18
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    92   2e-18
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=...    77   5e-14
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ...    77   5e-14
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa...    76   1e-13
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no...    75   2e-13
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus...    75   2e-13
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop...    75   3e-13
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop...    75   3e-13
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a...    75   3e-13
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa...    75   3e-13
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau...    75   3e-13
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ...    75   3e-13
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho...    74   4e-13
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ...    74   4e-13
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa...    72   2e-12
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila...    72   2e-12
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...    70   6e-12
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ...    70   8e-12
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ...    69   1e-11
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ...    69   1e-11
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ...    67   4e-11
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ...    67   5e-11
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ...    66   1e-10
sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2...    65   2e-10
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...    64   3e-10
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...    63   8e-10
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ...    63   1e-09
sp|Q62671|UBR5_RAT E3 ubiquitin-protein ligase UBR5 (Fragment) O...    62   2e-09

>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
           OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
          Length = 629

 Score =  103 bits (258), Expect = 4e-22
 Identities = 61/119 (51%), Positives = 74/119 (62%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQI 184
           PQG   +    P +MG       +  P+ I            EQ R MLGE LYPLV+Q+
Sbjct: 518 PQGRGGSGDVPPYDMG-------NNMPLTIGALASNLSNATPEQQRTMLGEVLYPLVEQV 570

Query: 185 EHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPALPTDQLGALSLN 361
           E + A KVTGMLLEMDQTEVLHLLESPEALKAKV EAM+VL+       T+QL +L+L+
Sbjct: 571 EAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAAGGATEQLASLNLS 629


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
           OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
          Length = 660

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 55/120 (45%), Positives = 74/120 (61%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQI 184
           PQG++  ++P+P++   +    A   PI            P ++ R MLGEQLYPLV++ 
Sbjct: 545 PQGILPPIIPLPIDASSISHQKAPLLPIS-KLTSSLASASPADRTR-MLGEQLYPLVERH 602

Query: 185 EHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPALPTDQLGALSLND 364
           E  H  KVTGMLLEMDQ E+LHL+ESPEALK+KV EA++VL+ +    PTD     S  D
Sbjct: 603 EPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRLSVD--PTDHDLGFSTTD 660


>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5
           OS=Arabidopsis thaliana GN=PAB5 PE=2 SV=2
          Length = 668

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   APQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQ 181
           APQG++   L         P  +    P+ I+           ++H  MLG+ LYPLV+Q
Sbjct: 545 APQGIIPLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQ 604

Query: 182 IEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQH-AQPA 325
            E  +A KVTGMLLEMDQ E+LHLLESPEALKAKV EA++VL+  A PA
Sbjct: 605 QEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPA 653


>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein
           OS=Xenopus tropicalis GN=epabp PE=2 SV=1
          Length = 629

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 45/102 (44%), Positives = 61/102 (59%)
 Frame = +2

Query: 14  MMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIEHD 193
           +   M P  L  G  P+ A+     P           P EQ + MLGE+LYPL+ ++   
Sbjct: 526 LQQVMEPAVLMQGQEPLTASSLASAP-----------PQEQKQ-MLGERLYPLIHEMHPT 573

Query: 194 HAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQ 319
            AGK+TGMLLE+D +E+LH+LESPE+L +KV EA+ VLQ  Q
Sbjct: 574 LAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQAHQ 615


>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B
           OS=Xenopus laevis GN=epabp-B PE=2 SV=1
          Length = 629

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 35/65 (53%), Positives = 52/65 (80%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           PL++ + +LGE++YPL+ ++    AGK+TGMLLE+D +E+LH+LESPE+L +KV EA+ V
Sbjct: 551 PLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAV 610

Query: 305 LQHAQ 319
           LQ  Q
Sbjct: 611 LQAHQ 615


>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo
           sapiens GN=PABPC4 PE=1 SV=1
          Length = 644

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           P ++ + MLGE+L+PL+  +  + AGK+TGMLLE+D +E+LH+LESPE+L++KV EA+ V
Sbjct: 563 PPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 622

Query: 305 LQ-HAQPALPTDQLGALS 355
           LQ H        ++GA++
Sbjct: 623 LQAHHAKKEAAQKVGAVA 640


>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus
           norvegicus GN=Pabpc1 PE=2 SV=1
          Length = 636

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 35/65 (53%), Positives = 51/65 (78%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           P ++ + MLGE+L+PL+  +    AGK+TGMLLE+D +E+LH+LESPE+L++KV EA+ V
Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613

Query: 305 LQHAQ 319
           LQ  Q
Sbjct: 614 LQAHQ 618


>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus
           musculus GN=Pabpc1 PE=1 SV=1
          Length = 636

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 35/65 (53%), Positives = 51/65 (78%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           P ++ + MLGE+L+PL+  +    AGK+TGMLLE+D +E+LH+LESPE+L++KV EA+ V
Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613

Query: 305 LQHAQ 319
           LQ  Q
Sbjct: 614 LQAHQ 618


>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus
           laevis GN=pabpc1-B PE=2 SV=1
          Length = 633

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 35/65 (53%), Positives = 51/65 (78%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           P ++ + MLGE+L+PL+  +    AGK+TGMLLE+D +E+LH+LESPE+L++KV EA+ V
Sbjct: 552 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 611

Query: 305 LQHAQ 319
           LQ  Q
Sbjct: 612 LQAHQ 616


>sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenopus
           laevis GN=pabpc1-A PE=1 SV=3
          Length = 633

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 35/65 (53%), Positives = 51/65 (78%)
 Frame = +2

Query: 125 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEV 304
           P ++ + MLGE+L+PL+  +    AGK+TGMLLE+D +E+LH+LESPE+L++KV EA+ V
Sbjct: 552 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 611

Query: 305 LQHAQ 319
           LQ  Q
Sbjct: 612 LQAHQ 616
tr_hit_id A9SVZ7
Definition tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 127
Score (bit) 163.0
E-value 6.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920655|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_G12.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten...   163   6e-39
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten...   160   4e-38
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten...   157   2e-37
tr|A9S664|A9S664_PHYPA Predicted protein OS=Physcomitrella paten...   157   2e-37
tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment) OS=Nic...   144   4e-33
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ...   144   4e-33
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs...   139   9e-32
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza...   139   9e-32
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs...   136   8e-31
tr|Q6UUN5|Q6UUN5_ORYSJ Putative poly(A)-binding protein (Putativ...   136   8e-31
tr|B8B9P0|B8B9P0_ORYSI Putative uncharacterized protein OS=Oryza...   136   8e-31
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome...   135   1e-30
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti...   135   2e-30
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos...   133   5e-30
tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Popul...   128   2e-28
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba...   128   2e-28
tr|Q9M6E5|Q9M6E5_TOBAC Poly(A)-binding protein (Fragment) OS=Nic...   128   2e-28
tr|Q1EMR9|Q1EMR9_PLAMJ PolyA-binding protein (Fragment) OS=Plant...   127   4e-28
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu...   126   8e-28
tr|A7QRL0|A7QRL0_VITVI Chromosome undetermined scaffold_151, who...   124   4e-27
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos...   123   7e-27
tr|O04684|O04684_MESCR Poly(A)-binding protein (Fragment) OS=Mes...   118   2e-25
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ...   117   3e-25
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs...   117   3e-25
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza...   117   3e-25
tr|A3AVD4|A3AVD4_ORYSJ Putative uncharacterized protein OS=Oryza...   117   3e-25
tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2 (Fr...   116   8e-25
tr|A5C9H4|A5C9H4_VITVI Putative uncharacterized protein OS=Vitis...   114   2e-24
tr|Q9C5J0|Q9C5J0_ARATH Putative poly(A) binding protein OS=Arabi...   109   1e-22
tr|Q56WT6|Q56WT6_ARATH Putative poly(A) binding protein OS=Arabi...   109   1e-22

>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
          Length = 645

 Score =  163 bits (412), Expect = 6e-39
 Identities = 86/127 (67%), Positives = 100/127 (78%), Gaps = 6/127 (4%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVMLGEQLYPL 172
           PQG+M AMLPVP+E+GG+PV  ADA    QP+PI+         P EQ R MLGEQLYPL
Sbjct: 518 PQGIMGAMLPVPIEIGGVPVANADAGVPQQPLPISALASALASAPPEQQRAMLGEQLYPL 577

Query: 173 VDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQ--PALPTDQLG 346
           VDQ+EHD AGKVTGMLLEMDQTEVLHL+ESPEALKAKV EAM+VL+ AQ  P+ PTDQLG
Sbjct: 578 VDQLEHDFAGKVTGMLLEMDQTEVLHLIESPEALKAKVAEAMDVLRMAQAVPSPPTDQLG 637

Query: 347 ALSLNDA 367
            L++ D+
Sbjct: 638 NLAIGDS 644


>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
          Length = 650

 Score =  160 bits (405), Expect = 4e-38
 Identities = 83/127 (65%), Positives = 100/127 (78%), Gaps = 6/127 (4%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVMLGEQLYPL 172
           PQG+M AM+PVPLE+GG+PV   D+    QP+PI+         P EQ R MLGEQLYPL
Sbjct: 523 PQGIMGAMVPVPLEIGGLPVANVDSGVPQQPLPISALASALASAPPEQQRAMLGEQLYPL 582

Query: 173 VDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQ--PALPTDQLG 346
           VDQ+EHD+AGKVTGMLLEMDQTEVLHL+ESPEAL+AKV EAM+VL+ AQ  P  PTD+LG
Sbjct: 583 VDQLEHDYAGKVTGMLLEMDQTEVLHLIESPEALRAKVAEAMDVLRMAQAAPVAPTDELG 642

Query: 347 ALSLNDA 367
            LS+++A
Sbjct: 643 NLSISNA 649


>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
          Length = 647

 Score =  157 bits (398), Expect = 2e-37
 Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 6/127 (4%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVMLGEQLYPL 172
           PQGMM  MLPVPLE+GGMP    D+    QP+PI+         P +Q R MLGEQLYPL
Sbjct: 520 PQGMMGVMLPVPLEIGGMPAANVDSGVPQQPLPISALASALASAPPDQQRAMLGEQLYPL 579

Query: 173 VDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQ--PALPTDQLG 346
           VDQ+EH+ AGKVTGMLLEMDQTEVLHL+ESPEALKAKV EAMEVL+ AQ  P+ PT++LG
Sbjct: 580 VDQLEHEFAGKVTGMLLEMDQTEVLHLIESPEALKAKVNEAMEVLRMAQAVPSAPTEELG 639

Query: 347 ALSLNDA 367
            LS++++
Sbjct: 640 NLSISNS 646


>tr|A9S664|A9S664_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124693 PE=4 SV=1
          Length = 153

 Score =  157 bits (398), Expect = 2e-37
 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 6/127 (4%)
 Frame = +2

Query: 5   PQGMMSAMLPVPLEMGGMPV----PAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPL 172
           PQG+++ MLPVPLE+GG P     P    QP+PI+         P +Q R MLGEQLYPL
Sbjct: 26  PQGIINTMLPVPLEIGGAPAANVDPGVPQQPLPISALASALASAPPDQQRAMLGEQLYPL 85

Query: 173 VDQIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQ--PALPTDQLG 346
           VDQ+EHD AGKVTGMLLEMDQTEVLHL+ESP+ALKAKV EAMEVL+ AQ  P+ PTDQLG
Sbjct: 86  VDQLEHDFAGKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRMAQAVPSAPTDQLG 145

Query: 347 ALSLNDA 367
            LS++D+
Sbjct: 146 NLSISDS 152


>tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment)
           OS=Nicotiana tabacum GN=PABP PE=2 SV=1
          Length = 479

 Score =  144 bits (362), Expect = 4e-33
 Identities = 78/120 (65%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = +2

Query: 11  GMMSAMLPVPLEMGGM-PVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIE 187
           G+   ML VP +MGGM P  +A  QP+PI+         P EQ R MLGE LYPLVDQ+E
Sbjct: 356 GVPGGMLSVPYDMGGMLPRDSAMGQPMPISTLASALANAPPEQQRTMLGESLYPLVDQLE 415

Query: 188 HDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPAL-PTDQLGALSLND 364
           H+HA KVTGMLLEMDQTEVLHLLESPEALKAKV EAMEVL++ Q    P DQL +LSLND
Sbjct: 416 HEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLND 475


>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota
           PE=2 SV=1
          Length = 658

 Score =  144 bits (362), Expect = 4e-33
 Identities = 76/119 (63%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
 Frame = +2

Query: 11  GMMSAMLPVPLEMGGM-PVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIE 187
           G+   MLPVP  MGGM P  AA  QP+PI          P +Q R MLGE LYPLVDQ+E
Sbjct: 536 GVGGGMLPVPYNMGGMLPREAAMGQPMPITALASALANAPADQQRTMLGENLYPLVDQLE 595

Query: 188 HDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPALPTDQLGALSLND 364
           HDHA KVTGMLLEMDQTEVLHLLESP+ALKAKV EAM+VL++       DQLG LSLN+
Sbjct: 596 HDHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMDVLRNVSQPNVADQLGGLSLNE 654


>tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1310_F05.15 PE=2 SV=1
          Length = 662

 Score =  139 bits (350), Expect = 9e-32
 Identities = 78/130 (60%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
 Frame = +2

Query: 2   APQGMMSAMLPVPLEMGGMPV-PAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVD 178
           A  G+   ++P P EMGGMP+  AA +QP+PI            +Q R+MLGE LYPLVD
Sbjct: 532 AMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPDQQRMMLGENLYPLVD 591

Query: 179 QIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQP----ALPTDQLG 346
           Q+EH+ A KVTGMLLEMDQTEVLHLLESPEALKAKV EAMEVL+ AQ     A P  QL 
Sbjct: 592 QLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTAQQIQTNATPEQQLA 651

Query: 347 ALSLNDARTS 376
           +LSLND   S
Sbjct: 652 SLSLNDGVVS 661


>tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30396 PE=4 SV=1
          Length = 662

 Score =  139 bits (350), Expect = 9e-32
 Identities = 78/130 (60%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
 Frame = +2

Query: 2   APQGMMSAMLPVPLEMGGMPV-PAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVD 178
           A  G+   ++P P EMGGMP+  AA +QP+PI            +Q R+MLGE LYPLVD
Sbjct: 532 AMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPDQQRMMLGENLYPLVD 591

Query: 179 QIEHDHAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQP----ALPTDQLG 346
           Q+EH+ A KVTGMLLEMDQTEVLHLLESPEALKAKV EAMEVL+ AQ     A P  QL 
Sbjct: 592 QLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTAQQIQTNATPEQQLA 651

Query: 347 ALSLNDARTS 376
           +LSLND   S
Sbjct: 652 SLSLNDGVVS 661


>tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subsp.
           japonica GN=P0451H06.101 PE=2 SV=1
          Length = 660

 Score =  136 bits (342), Expect = 8e-31
 Identities = 74/124 (59%), Positives = 88/124 (70%), Gaps = 4/124 (3%)
 Frame = +2

Query: 17  MSAMLPVPLEMGGMPVPAADAQP-IPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIEHD 193
           +  ++P P EMG MP+  A A P +PI          P +Q R+MLGE LYPLVDQ+EHD
Sbjct: 537 VGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQQRLMLGESLYPLVDQLEHD 596

Query: 194 HAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPA---LPTDQLGALSLND 364
            A KVTGMLLEMDQTEVLHL+ESP+ALKAKV EAMEVL++AQ      PTDQL AL+L+D
Sbjct: 597 QAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQQANTPTDQLAALTLSD 656

Query: 365 ARTS 376
              S
Sbjct: 657 GVVS 660


>tr|Q6UUN5|Q6UUN5_ORYSJ Putative poly(A)-binding protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0095C12.10 PE=4 SV=1
          Length = 266

 Score =  136 bits (342), Expect = 8e-31
 Identities = 74/124 (59%), Positives = 88/124 (70%), Gaps = 4/124 (3%)
 Frame = +2

Query: 17  MSAMLPVPLEMGGMPVPAADAQP-IPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIEHD 193
           +  ++P P EMG MP+  A A P +PI          P +Q R+MLGE LYPLVDQ+EHD
Sbjct: 143 VGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQQRLMLGESLYPLVDQLEHD 202

Query: 194 HAGKVTGMLLEMDQTEVLHLLESPEALKAKVREAMEVLQHAQPA---LPTDQLGALSLND 364
            A KVTGMLLEMDQTEVLHL+ESP+ALKAKV EAMEVL++AQ      PTDQL AL+L+D
Sbjct: 203 QAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQQANTPTDQLAALTLSD 262

Query: 365 ARTS 376
              S
Sbjct: 263 GVVS 266