BP920656 |
Clone id |
YMU001_000139_H01 |
Library |
YMU01 |
Length |
499 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_H01. |
Accession |
BP920656 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAAGATAAGATGGGAAACCCCAGCTGTGATAGTGGCTGGGCTGCCTGCCTGTGATGCTTC TGTGGGTTCATTGAGAGGGGTACTTTTCGTAGCCTTCTGTGTCTCGGATGAAACAATACC ATGATGCTGTTGATTCATAGAGACCTCCATATTGCCGAATAGAGGGCCCTCTGTTTCATT TTGCATAGCCTCATGCAATCTGGTTGCTCTTGAGCCCTCCTCAAGCATGGACTTCTGTAC AGGAGCAGTTTCGCACATCTTTGCAGTAGGGCACGTTAAACCAATGCCCTCCATCCCATG CATGGAAACTTTCTTTGTGCTTATCTGTGCAGCCTTCTCACGGCTTGAAATTTCAACTCC AGCCAGAGAAACCTGATGTAACTTGTTCTCTCCAACAAGTTCACTACATGTATTCATGAC CTCGATCTTCTGAAAAGACTTTTCATTTGTGCTTGCATGGGCTTCTTTAGGGCTAGTAGC ATGCAGAGAGGGGTGTAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O09000 |
Definition |
sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus musculus |
Align length |
168 |
Score (bit) |
33.1 |
E-value |
0.74 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4LCS3 |
Definition |
tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis |
Align length |
156 |
Score (bit) |
38.1 |
E-value |
0.23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920656|Adiantum capillus-veneris mRNA, clone: YMU001_000139_H01. (499 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis GN=GJ11255 ... 38 0.23 tr|A8SAH7|A8SAH7_9FIRM Putative uncharacterized protein OS=Faeca... 37 0.67 tr|Q2CD42|Q2CD42_9RHOB OmpA domain protein OS=Oceanicola granulo... 35 1.5 tr|Q980X3|Q980X3_SULSO Putative uncharacterized protein OS=Sulfo... 35 1.5 tr|Q4V8Z4|Q4V8Z4_DANRE Zgc:114075 OS=Danio rerio GN=zgc:114075 P... 35 2.6 tr|B3PRS9|B3PRS9_RHIE6 Hypothetical conserved protein OS=Rhizobi... 35 2.6 tr|B2A8V7|B2A8V7_PODAN Predicted CDS Pa_1_7530 OS=Podospora anse... 35 2.6 tr|Q1PUR2|Q1PUR2_9BACT Putative uncharacterized protein OS=Candi... 34 3.3 tr|B8NX99|B8NX99_ASPFL Putative uncharacterized protein OS=Asper... 34 3.3 tr|A3LTL7|A3LTL7_PICST Hyphally-regulated cell wall protein OS=P... 34 3.3 tr|A6VIA2|A6VIA2_METM7 Putative uncharacterized protein OS=Metha... 34 4.4 tr|A2CCX8|A2CCX8_PROM3 Transketolase OS=Prochlorococcus marinus ... 33 5.7 tr|Q3UQL7|Q3UQL7_MOUSE Putative uncharacterized protein OS=Mus m... 33 9.7 tr|Q05BA5|Q05BA5_MOUSE Nuclear receptor coactivator 3 OS=Mus mus... 33 9.7 tr|B2RUJ1|B2RUJ1_MOUSE Ncoa3 protein OS=Mus musculus GN=Ncoa3 PE... 33 9.7 tr|A5D6Q2|A5D6Q2_MOUSE Ncoa3 protein (Fragment) OS=Mus musculus ... 33 9.7 tr|A2A468|A2A468_MOUSE Nuclear receptor coactivator 3 OS=Mus mus... 33 9.7 tr|Q7V4J4|Q7V4J4_PROMM Transketolase OS=Prochlorococcus marinus ... 33 9.7 tr|B0UN17|B0UN17_METS4 UspA domain protein OS=Methylobacterium s... 33 9.7 tr|B6GV97|B6GV97_STRSL Surface immunogenic protein OS=Streptococ... 33 9.7 tr|B4LR57|B4LR57_DROVI GJ15404 OS=Drosophila virilis GN=GJ15404 ... 33 9.7 tr|B4G8S4|B4G8S4_DROPE GL19343 OS=Drosophila persimilis GN=GL193... 33 9.7 tr|B3LC94|B3LC94_PLAKH Putative uncharacterized protein OS=Plasm... 33 9.7 tr|Q1E9Q1|Q1E9Q1_COCIM Putative uncharacterized protein OS=Cocci... 33 9.7 tr|Q0UY90|Q0UY90_PHANO Putative uncharacterized protein OS=Phaeo... 33 9.7 tr|A8PXP0|A8PXP0_MALGO Putative uncharacterized protein OS=Malas... 33 9.7 tr|O93672|O93672_9CREN Putative uncharacterized protein OS=Sulfo... 33 9.7
>tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis GN=GJ11255 PE=4 SV=1 Length = 1782
Score = 38.1 bits (87), Expect = 0.23 Identities = 32/156 (20%), Positives = 66/156 (42%) Frame = -2
Query: 480 ATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSM 301 ++S +++ ++ E E ++ SE +++ + S + E SS A S+ Sbjct: 518 SSSSEDSSSAVTEPLESSTESFSSSSEAPSSSEVTEPSDSSTESSSSSSEASSSS----- 572
Query: 300 HGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHH 121 +T T E++ S + S ++ + + ++ TEG + E S + Sbjct: 573 ------AVTDQTESSTESSVESSSPSSQASSSSEVTDPSESSTEGSSSSSQEPSESSTES 626
Query: 120 GIVSSETQKATKSTPLNEPTEASQAGSPATITAGVS 13 SSE + + P TE+S + S AT ++ V+ Sbjct: 627 SSSSSEVSSSEITEPSESSTESSSSSSEATSSSEVT 662
>tr|A8SAH7|A8SAH7_9FIRM Putative uncharacterized protein OS=Faecalibacterium prausnitzii M21/2 GN=FAEPRAM212_01374 PE=3 SV=1 Length = 291
Score = 36.6 bits (83), Expect = 0.67 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = -2
Query: 495 HPSLHATSPKEAHASTNEK----SFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAA 328 +P LH +AHA + V+ C ELVG+ ++HQ + + + E AA Sbjct: 122 YPDLHIVH-FDAHADLRDDYLGAKLSHACVLRRCHELVGDGRIHQFCIRSGDRAEFEFAA 180
Query: 327 QISTKKVSMHGMEGIGLTCPTAKMCET 247 Q MH + GL TA++CE+ Sbjct: 181 Q----HTEMHKFDFTGLAELTAQLCES 203
>tr|Q2CD42|Q2CD42_9RHOB OmpA domain protein OS=Oceanicola granulosus HTCC2516 GN=OG2516_12331 PE=3 SV=1 Length = 298
Score = 35.4 bits (80), Expect = 1.5 Identities = 25/69 (36%), Positives = 34/69 (49%) Frame = -2
Query: 375 QVSLAGVEISSREKAAQISTKKVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRL 196 Q SLAG SR +A Q+ T+ ++ HG + LT APV ++ EG A R Sbjct: 232 QGSLAGNISLSRRRADQVRTRLIAEHGTDPAQLTADGVGY--LAPVASNLTPEGREANRR 289
Query: 195 HEAMQNETE 169 EA+ TE Sbjct: 290 VEAVLVSTE 298
>tr|Q980X3|Q980X3_SULSO Putative uncharacterized protein OS=Sulfolobus solfataricus GN=SSO0152 PE=4 SV=1 Length = 600
Score = 35.4 bits (80), Expect = 1.5 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -2
Query: 450 TNEKSFQKIEVMNTCSELV--GENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGL 277 +NEK+ +K+E+M T + GEN + I+SR+K + +ST + G+EG+G+ Sbjct: 147 SNEKAKRKLELMETIISRIESGENPFRYEMY--IIINSRDKNSALSTASMIRQGLEGLGI 204
Query: 276 TCPTAKMCE 250 A + E Sbjct: 205 KTRLATLHE 213
>tr|Q4V8Z4|Q4V8Z4_DANRE Zgc:114075 OS=Danio rerio GN=zgc:114075 PE=2 SV=1 Length = 524
Score = 34.7 bits (78), Expect = 2.6 Identities = 31/112 (27%), Positives = 50/112 (44%) Frame = -2
Query: 492 PSLHATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTK 313 P+ ++P E + E S+ + +V +T + L + +L + A VE++ T Sbjct: 46 PTTPTSAPDEGDIFSEEGSYIRSDVHHTTNGLHSDEELDLFTEATVELTL--------TN 97
Query: 312 KVSMHGMEGIGLTCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLF 157 S E IG PTA C T V S+L+ S T+ E ++ E G F Sbjct: 98 TTSQGRREIIG---PTASACNTTHVPNSILKP-SIVTKTMEELEEEESGDQF 145
>tr|B3PRS9|B3PRS9_RHIE6 Hypothetical conserved protein OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0002687 PE=4 SV=1 Length = 305
Score = 34.7 bits (78), Expect = 2.6 Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 3/158 (1%) Frame = -2
Query: 495 HPSLHATSPKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQIST 316 H ++ P+ A S ++ + E+ N + + L +LA ++S K +S Sbjct: 148 HALMNTADPRMAAISAFATAYAQYELANGAAPPADDPALGDAALAAA-LASATKTGTVSP 206
Query: 315 KKVSM-HGMEGIGLTCPTA-KMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEV 142 + +S G+G T +M ET Q E + AT + + EG + V Sbjct: 207 EALSWAKDTLGVGTAVGTIDQMRETMAAQAPAAETPADATETETS--DTAEGSDTTDPAV 264
Query: 141 SMNQQHHGIVSSE-TQKATKSTPLNEPTEASQAGSPAT 31 + G SSE T+STP +PTE S S T Sbjct: 265 TAETPEAGTGSSEEVSGTTESTPAIDPTETSAPTSTET 302
>tr|B2A8V7|B2A8V7_PODAN Predicted CDS Pa_1_7530 OS=Podospora anserina PE=4 SV=1 Length = 7657
Score = 34.7 bits (78), Expect = 2.6 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = -2
Query: 471 PKEAHASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVS 304 P++ H E SFQ ++ + T + + +LH++ LA I +R ++ + + +S Sbjct: 4517 PQQPHLQQQENSFQALQPIPTAASPIDATQLHELRLASSPIGARPRSVSFTLEAIS 4572
>tr|Q1PUR2|Q1PUR2_9BACT Putative uncharacterized protein OS=Candidatus Kuenenia stuttgartiensis GN=kustb0226 PE=4 SV=1 Length = 759
Score = 34.3 bits (77), Expect = 3.3 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = -2
Query: 393 GENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGLTCPTA---KMCETAPVQKSML 223 G+ + V+ + V + SRE QIST + ++GI A K T+P+ K L Sbjct: 61 GDEEFLVVAFSAVNLFSREYMQQISTLAGKIKNLDGIVTVASLADVFKSKVTSPLFKEKL 120
Query: 222 EEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHHGIVSS 106 + R + ++ Q P++ N +S N + IV++ Sbjct: 121 KTYGRRSVMNVFKQEVRTDPVYQNTIISKNGRTTAIVAT 159
>tr|B8NX99|B8NX99_ASPFL Putative uncharacterized protein OS=Aspergillus flavus NRRL3357 GN=AFLA_115850 PE=4 SV=1 Length = 790
Score = 34.3 bits (77), Expect = 3.3 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1
Query: 157 RQYGGLYESTASWYC--FIRDTEGYEKYPSQ*THRSITGRQPSHYHSWGF 14 R+ G + ST SWY +R +GY + P + + P+H+H W F Sbjct: 23 RKRHGTWASTKSWYSRTVLRSGKGYNRLP-------VKAQDPTHFHGWRF 65
>tr|A3LTL7|A3LTL7_PICST Hyphally-regulated cell wall protein OS=Pichia stipitis GN=HYR10 PE=4 SV=1 Length = 980
Score = 34.3 bits (77), Expect = 3.3 Identities = 28/139 (20%), Positives = 55/139 (39%) Frame = -2
Query: 456 ASTNEKSFQKIEVMNTCSELVGENKLHQVSLAGVEISSREKAAQISTKKVSMHGMEGIGL 277 +S+ S ++I + SE ++ + E SS E +++ S++ S + Sbjct: 416 SSSETSSSEEISSTESSSETSSSEEISSTESSS-ETSSSESSSETSSETSSSEEVSSTEE 474
Query: 276 TCPTAKMCETAPVQKSMLEEGSRATRLHEAMQNETEGPLFGNMEVSMNQQHHGIVSSETQ 97 T ET+ ++ E S T E E+ + E+S + SSE Sbjct: 475 VSSTESSSETSSSEEVSSTESSSETSSEEVSSTESSSETSSSEEISSTESSSETSSSEEV 534
Query: 96 KATKSTPLNEPTEASQAGS 40 +T+S+ +E + + S Sbjct: 535 SSTESSSETSSSEETSSNS 553
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