BP920658
Clone id YMU001_000139_H03
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000139_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGAGAATAGATTATATTACTGCTGATTGCTTTAGAAGTAGCAAAGACGTGCTTGTGTTG
GCGGTGCCGCAGCAAGCCGTCAACAGAGAAAACCCTGTAATATATGTATGGGTAGGAAGG
GAGCTGTACGACCAAGCTGGAGATTTGGACTCACCATGGCAGCGAGTTGGACACCAATTC
CTCAAACATTTGAAGTGCCGGACAGGCACACAGATAAGGGTGGTAAAGCAGGGCGGTGAA
CCAGATGAACTTTTGGTTATGTCTTTGCAATAATGCCCAAGATTTTGGGAGGTGGCGAGA
TGGAAGTCCAAGGCATAAAAGGGGCGCTATAGGCTCTCAGAGCTGAAGTGGGAACCTCCA
CTATACCTTATCTGGTGGGCTGGC
■■Homology search results ■■ -
sp_hit_id Q60604
Definition sp|Q60604|ADSV_MOUSE Adseverin OS=Mus musculus
Align length 47
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920658|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_H03.
(363 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60604|ADSV_MOUSE Adseverin OS=Mus musculus GN=Scin PE=1 SV=2 31 1.7
sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog (... 31 1.7
sp|Q60321|Y013_METJA Uncharacterized protein MJ0013 OS=Methanoca... 31 2.2
sp|A5UKY3|GLMM_METS3 Probable phosphoglucosamine mutase OS=Metha... 30 2.9
sp|Q28046|ADSV_BOVIN Adseverin OS=Bos taurus GN=SCIN PE=1 SV=1 30 2.9
sp|O42912|TAD1_SCHPO tRNA-specific adenosine deaminase 1 OS=Schi... 30 3.8
sp|Q9URU4|YBKF_SCHPO Putative cell agglutination protein C1289.1... 30 3.8
sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo s... 30 3.8
sp|A6NC51|YS057_HUMAN Transmembrane protein LOC284417 OS=Homo sa... 29 6.4

>sp|Q60604|ADSV_MOUSE Adseverin OS=Mus musculus GN=Scin PE=1 SV=2
Length = 715

Score = 31.2 bits (69), Expect = 1.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1

Query: 79 IYVWVGRELYDQAGDLDSPWQRVGHQFLKHLKCRTGTQIRVVKQGGE 219
I+VW G+ Q + +FL+ +K T TQI+V+ +GGE
Sbjct: 293 IFVWKGKNANPQERKTA---MKTAEEFLQKMKYSTNTQIQVLPEGGE 336


>sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog
(Fragment) OS=Macaca fascicularis GN=QtsA-12219 PE=2
SV=2
Length = 798

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3

Query: 277 SPPPKILG-IIAKT*PKVHLVHRPALPPLSVCLSGTSN 167
SPP G +AKT P+ H V PA PL CL+ T++
Sbjct: 59 SPPQVCPGPAMAKTPPQTHPVATPAKSPLQTCLAATTS 96


>sp|Q60321|Y013_METJA Uncharacterized protein MJ0013
OS=Methanocaldococcus jannaschii GN=MJ0013 PE=4 SV=1
Length = 162

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1

Query: 220 PDELLVMSLQ*CPRFWEVARWKSKA*KGRYRLSELKWE 333
PDE + +S + WE WK K K RY++ + K++
Sbjct: 28 PDEFIKISQRAIDIIWENINWKEKVVKHRYKIGKKKYK 65


>sp|A5UKY3|GLMM_METS3 Probable phosphoglucosamine mutase
OS=Methanobrevibacter smithii (strain PS / ATCC 35061 /
DSM 861) GN=glmM PE=3 SV=2
Length = 445

Score = 30.4 bits (67), Expect = 2.9
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -1

Query: 201 HPYLCACP-----ALQMFEELVSNSLPW*VQISSLVVQLPSYPYIYYRV 70
HP C CP L+M ELVSN ++S L++++PSYP I ++
Sbjct: 320 HPDFCMCPDGILSGLRM-AELVSNK----GKLSELLLEIPSYPNIREKI 363


>sp|Q28046|ADSV_BOVIN Adseverin OS=Bos taurus GN=SCIN PE=1 SV=1
Length = 715

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1

Query: 79 IYVWVGRELYDQAGDLDSPWQRVGHQFLKHLKCRTGTQIRVVKQGGE 219
I+VW G++ Q + +FL+ + T TQI+V+ +GGE
Sbjct: 293 IFVWKGKDANPQERKAA---MKTAEEFLQQMNYSTNTQIQVLPEGGE 336


>sp|O42912|TAD1_SCHPO tRNA-specific adenosine deaminase 1
OS=Schizosaccharomyces pombe GN=SPBC16A3.06 PE=2 SV=1
Length = 388

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -1

Query: 261 SWALLQRHNQKFIWFTALLYHPYLCACP----ALQMFEELVSNSLPW*VQISS 115
+W L N KF + LL H Y+ CP ++++ + N+ PW + + S
Sbjct: 116 TWLLEVADNGKFTLNSNLLIHLYVSECPCGDASMELLASRLENNKPWNLTVDS 168


>sp|Q9URU4|YBKF_SCHPO Putative cell agglutination protein C1289.15
OS=Schizosaccharomyces pombe GN=SPBC1289.15 PE=2 SV=1
Length = 1283

Score = 30.0 bits (66), Expect = 3.8
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -2

Query: 296 YALDFHLATSQNLGHYCKDITKSSSGSPPCFTTLICVPVRHFKCLRNWCPTRCHGESKSP 117
Y+ + + N G + +T + + + IC+P HF+ +WC S+
Sbjct: 1195 YSYNSKVDNISNPGSWTSTVTVQGTSTG----SYICMP--HFQIQYDWCSAGVTDMSECN 1248

Query: 116 AWSYSSLPTHTYITG 72
WSY ++ YITG
Sbjct: 1249 TWSYQK--SYDYITG 1261


>sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo
sapiens GN=KIAA1683 PE=1 SV=1
Length = 1180

Score = 30.0 bits (66), Expect = 3.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3

Query: 250 IAKT*PKVHLVHRPALPPLSVCLSGT 173
+AKT P++H V PA PL CLS T
Sbjct: 450 MAKTPPQMHPVTTPAKNPLQTCLSAT 475


>sp|A6NC51|YS057_HUMAN Transmembrane protein LOC284417 OS=Homo
sapiens PE=3 SV=1
Length = 233

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3

Query: 346 GIVEVPTSALRAYSAPFMPWTSISPPP 266
G++ V SAL + + PW S+SPPP
Sbjct: 197 GLLAVDFSALESCTLCVQPWPSLSPPP 223


tr_hit_id A7R4N1
Definition tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole genome shotgun sequence OS=Vitis vinifera
Align length 85
Score (bit) 45.1
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920658|Adiantum capillus-veneris mRNA, clone:
YMU001_000139_H03.
(363 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, who... 45 0.002
tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, who... 45 0.002
tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabac... 44 0.005
tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuber... 43 0.007
tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome ... 39 0.17
tr|B6NB42|B6NB42_BRAFL Putative uncharacterized protein OS=Branc... 34 3.2
tr|Q2CBM7|Q2CBM7_9RHOB N-methylhydantoinase OS=Oceanicola granul... 33 9.3
tr|Q0E1C0|Q0E1C0_ORYSJ Os02g0463700 protein OS=Oryza sativa subs... 33 9.3

>tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004591001 PE=4 SV=1
Length = 818

Score = 45.1 bits (105), Expect = 0.002
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Frame = +1

Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159
S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F
Sbjct: 717 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 776

Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234
L + + ++VV++G EP++LL
Sbjct: 777 LTQMGLPSKALVQVVREGEEPEQLL 801


>tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00011883001 PE=4 SV=1
Length = 928

Score = 45.1 bits (105), Expect = 0.002
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Frame = +1

Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159
S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F
Sbjct: 827 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 886

Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234
L + + ++VV++G EP++LL
Sbjct: 887 LTQMGLPSKALVQVVREGEEPEQLL 911


>tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabacum
GN=NtMKP1 PE=2 SV=1
Length = 862

Score = 43.5 bits (101), Expect = 0.005
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Frame = +1

Query: 1 ADCFRSSKDVLVLAVPQQAVNRENP-VIYVWVGRELY------------DQAGDLDSPWQ 141
A F S+ V ++ +P ++ + +Y+WVGR++ D W+
Sbjct: 760 ASGFFDSRSVYIIVIPDLNLDENSSNSLYIWVGRDVQWKESPNQVINNESMCEDGHVHWE 819

Query: 142 RVGHQFLKHLKCRTGTQIRVVKQGGEPDELL 234
+VG +FL T + +++VK+G EP++LL
Sbjct: 820 KVGRRFLIQKGLATSSLVQIVKEGEEPEQLL 850


>tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuberosum
GN=StMKP1 PE=2 SV=1
Length = 874

Score = 43.1 bits (100), Expect = 0.007
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Frame = +1

Query: 19 SKDVLVLAVPQQAVNRENPV-IYVWVGRELY-----DQAGDLDSP-------WQRVGHQF 159
S+ V ++ +P +++ + +Y+W+GR++ DQ + DS W++VG F
Sbjct: 773 SRSVYIIVIPDLSLDENSSSSLYIWMGRDVQWKESSDQVINNDSMCEDNHVHWEKVGLNF 832

Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234
L T + +++VK+G EP++LL
Sbjct: 833 LIQKGLATSSLVQIVKEGEEPEQLL 857


>tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030744001
PE=4 SV=1
Length = 881

Score = 38.5 bits (88), Expect = 0.17
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Frame = +1

Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159
S+ V ++ P + NP V+YVW+GR + + G D W+ VGH+F
Sbjct: 769 SRSVYIMFAPDSNLGTSNPEVLYVWLGRGVSYEKGQSQLTSSDGTCKDNHVHWEMVGHKF 828

Query: 160 LKHLKCRTGTQIRVV 204
L + R+ I+VV
Sbjct: 829 LAQMGLRSEALIQVV 843


>tr|B6NB42|B6NB42_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_126840 PE=4 SV=1
Length = 3194

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2

Query: 257 GHYCKDITKSSSGSPPCFTTLICV-PVRHFKCLRNWCPTRCHGESKSPAWSYSSLPT 90
G C+DI + +SG+PPC C+ + F+C+ CP G+ S S P+
Sbjct: 563 GRNCQDIDECTSGTPPCAPNANCINEIGTFRCV---CPPGYEGDGFSSCTPLSPQPS 616


>tr|Q2CBM7|Q2CBM7_9RHOB N-methylhydantoinase OS=Oceanicola
granulosus HTCC2516 GN=OG2516_06524 PE=4 SV=1
Length = 653

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -2

Query: 344 YSGGSHFSSESL*RPFYALDFHLATSQNLGHYCKDITKSSSGS 216
Y+GG+HFS L RP + D L SQ+ GH+ D+ S GS
Sbjct: 99 YAGGTHFSDVRLVRPIFDDDKLLGFSQSNGHW-SDLGGSVPGS 140


>tr|Q0E1C0|Q0E1C0_ORYSJ Os02g0463700 protein OS=Oryza sativa subsp.
japonica GN=Os02g0463700 PE=4 SV=1
Length = 1677

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2

Query: 152 CPTRCHGESKSPAWSYSSLPTHTYITGFSL 63
CPT CH E K+P +Y S+ H Y G+ L
Sbjct: 1522 CPTECHAEGKAPEVNY-SINGHDYTMGYYL 1550