BP920658 |
Clone id |
YMU001_000139_H03 |
Library |
YMU01 |
Length |
384 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000139_H03. |
Accession |
BP920658 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1872Contig1 |
Sequence |
AAGAGAATAGATTATATTACTGCTGATTGCTTTAGAAGTAGCAAAGACGTGCTTGTGTTG GCGGTGCCGCAGCAAGCCGTCAACAGAGAAAACCCTGTAATATATGTATGGGTAGGAAGG GAGCTGTACGACCAAGCTGGAGATTTGGACTCACCATGGCAGCGAGTTGGACACCAATTC CTCAAACATTTGAAGTGCCGGACAGGCACACAGATAAGGGTGGTAAAGCAGGGCGGTGAA CCAGATGAACTTTTGGTTATGTCTTTGCAATAATGCCCAAGATTTTGGGAGGTGGCGAGA TGGAAGTCCAAGGCATAAAAGGGGCGCTATAGGCTCTCAGAGCTGAAGTGGGAACCTCCA CTATACCTTATCTGGTGGGCTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60604 |
Definition |
sp|Q60604|ADSV_MOUSE Adseverin OS=Mus musculus |
Align length |
47 |
Score (bit) |
31.2 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R4N1 |
Definition |
tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
85 |
Score (bit) |
45.1 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920658|Adiantum capillus-veneris mRNA, clone: YMU001_000139_H03. (363 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, who... 45 0.002 tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, who... 45 0.002 tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabac... 44 0.005 tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuber... 43 0.007 tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome ... 39 0.17 tr|B6NB42|B6NB42_BRAFL Putative uncharacterized protein OS=Branc... 34 3.2 tr|Q2CBM7|Q2CBM7_9RHOB N-methylhydantoinase OS=Oceanicola granul... 33 9.3 tr|Q0E1C0|Q0E1C0_ORYSJ Os02g0463700 protein OS=Oryza sativa subs... 33 9.3
>tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004591001 PE=4 SV=1 Length = 818
Score = 45.1 bits (105), Expect = 0.002 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 13/85 (15%) Frame = +1
Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159 S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F Sbjct: 717 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 776
Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234 L + + ++VV++G EP++LL Sbjct: 777 LTQMGLPSKALVQVVREGEEPEQLL 801
>tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011883001 PE=4 SV=1 Length = 928
Score = 45.1 bits (105), Expect = 0.002 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 13/85 (15%) Frame = +1
Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159 S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F Sbjct: 827 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 886
Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234 L + + ++VV++G EP++LL Sbjct: 887 LTQMGLPSKALVQVVREGEEPEQLL 911
>tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabacum GN=NtMKP1 PE=2 SV=1 Length = 862
Score = 43.5 bits (101), Expect = 0.005 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Frame = +1
Query: 1 ADCFRSSKDVLVLAVPQQAVNRENP-VIYVWVGRELY------------DQAGDLDSPWQ 141 A F S+ V ++ +P ++ + +Y+WVGR++ D W+ Sbjct: 760 ASGFFDSRSVYIIVIPDLNLDENSSNSLYIWVGRDVQWKESPNQVINNESMCEDGHVHWE 819
Query: 142 RVGHQFLKHLKCRTGTQIRVVKQGGEPDELL 234 +VG +FL T + +++VK+G EP++LL Sbjct: 820 KVGRRFLIQKGLATSSLVQIVKEGEEPEQLL 850
>tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuberosum GN=StMKP1 PE=2 SV=1 Length = 874
Score = 43.1 bits (100), Expect = 0.007 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 13/85 (15%) Frame = +1
Query: 19 SKDVLVLAVPQQAVNRENPV-IYVWVGRELY-----DQAGDLDSP-------WQRVGHQF 159 S+ V ++ +P +++ + +Y+W+GR++ DQ + DS W++VG F Sbjct: 773 SRSVYIIVIPDLSLDENSSSSLYIWMGRDVQWKESSDQVINNDSMCEDNHVHWEKVGLNF 832
Query: 160 LKHLKCRTGTQIRVVKQGGEPDELL 234 L T + +++VK+G EP++LL Sbjct: 833 LIQKGLATSSLVQIVKEGEEPEQLL 857
>tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030744001 PE=4 SV=1 Length = 881
Score = 38.5 bits (88), Expect = 0.17 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%) Frame = +1
Query: 19 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQRVGHQF 159 S+ V ++ P + NP V+YVW+GR + + G D W+ VGH+F Sbjct: 769 SRSVYIMFAPDSNLGTSNPEVLYVWLGRGVSYEKGQSQLTSSDGTCKDNHVHWEMVGHKF 828
Query: 160 LKHLKCRTGTQIRVV 204 L + R+ I+VV Sbjct: 829 LAQMGLRSEALIQVV 843
>tr|B6NB42|B6NB42_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126840 PE=4 SV=1 Length = 3194
Score = 34.3 bits (77), Expect = 3.2 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -2
Query: 257 GHYCKDITKSSSGSPPCFTTLICV-PVRHFKCLRNWCPTRCHGESKSPAWSYSSLPT 90 G C+DI + +SG+PPC C+ + F+C+ CP G+ S S P+ Sbjct: 563 GRNCQDIDECTSGTPPCAPNANCINEIGTFRCV---CPPGYEGDGFSSCTPLSPQPS 616
>tr|Q2CBM7|Q2CBM7_9RHOB N-methylhydantoinase OS=Oceanicola granulosus HTCC2516 GN=OG2516_06524 PE=4 SV=1 Length = 653
Score = 32.7 bits (73), Expect = 9.3 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -2
Query: 344 YSGGSHFSSESL*RPFYALDFHLATSQNLGHYCKDITKSSSGS 216 Y+GG+HFS L RP + D L SQ+ GH+ D+ S GS Sbjct: 99 YAGGTHFSDVRLVRPIFDDDKLLGFSQSNGHW-SDLGGSVPGS 140
>tr|Q0E1C0|Q0E1C0_ORYSJ Os02g0463700 protein OS=Oryza sativa subsp. japonica GN=Os02g0463700 PE=4 SV=1 Length = 1677
Score = 32.7 bits (73), Expect = 9.3 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2
Query: 152 CPTRCHGESKSPAWSYSSLPTHTYITGFSL 63 CPT CH E K+P +Y S+ H Y G+ L Sbjct: 1522 CPTECHAEGKAPEVNY-SINGHDYTMGYYL 1550
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