BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920675|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_A11.
         (282 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8CJI4|H1FNT_MOUSE Testis-specific H1 histone OS=Mus musculus...    29   6.3  
sp|P18488|EMS_DROME Homeotic protein empty spiracles OS=Drosophi...    29   8.3  
sp|Q8NA72|CE037_HUMAN Uncharacterized protein C5orf37 OS=Homo sa...    29   8.3  

>sp|Q8CJI4|H1FNT_MOUSE Testis-specific H1 histone OS=Mus musculus
           GN=H1fnt PE=2 SV=2
          Length = 398

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 178 PARQTLSKPASFNNPS-KGDVSSHSLARSGRSGGGE 282
           P +QT+ KPA  N PS +G   + S  +SG+ G  E
Sbjct: 361 PVKQTIQKPALDNAPSIQGKACTKSFTKSGQPGDTE 396


>sp|P18488|EMS_DROME Homeotic protein empty spiracles OS=Drosophila
           melanogaster GN=ems PE=2 SV=2
          Length = 497

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 152 PHPHISYAHQHAKP*VNQHLLTIH 223
           PHPH+S A QH    ++QHLL  H
Sbjct: 111 PHPHLSPAQQHV---LHQHLLMQH 131


>sp|Q8NA72|CE037_HUMAN Uncharacterized protein C5orf37 OS=Homo
           sapiens GN=C5orf37 PE=1 SV=2
          Length = 575

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 191 VWRAGVHNLYEDVVTRAIQMPDLESTLEICNNRDSK 84
           VWR+ V   ++DVV RA Q    E  ++I N+ ++K
Sbjct: 287 VWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAK 322

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920675|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_A11.
         (282 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3VTC3|B3VTC3_SORBI Putative retroelement protein OS=Sorghum ...    33   5.5  

>tr|B3VTC3|B3VTC3_SORBI Putative retroelement protein OS=Sorghum
           bicolor PE=4 SV=1
          Length = 1029

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 95  CCCKSPECSPSLAFE*LWLPHPHISYAHQHAKP 193
           CCC SP  S   A+   WL HPH+   H HA P
Sbjct: 24  CCCPSP--SMGNAYSRCWL-HPHLPLGHGHAPP 53