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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920676
Clone id YMU001_000140_A12
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTACCTGCAGGTACTCAAGTGCCTGTATAGCACATAAACGAATTACATTTTACAAAAATG
GCACTACAGTAAGCAATGGTTTTCCCATTTTGTAGGAGGGCTACACGAATCATTCCTCAA
AGGTCATGTCTATCTTCTACTCTCCACTATAACAAGGTGATGATACAGCCCACTAATTTC
ATTGCTTTCAATCGATCGGTAAAGCAGCATTTCAAGTGAGTTGCTGACATGATGTGGGAA
AATACAGACACCCCATCTTCTAATGTCAAAGTCTCTGTGAGAAATACCTTCAAATGTCTT
CGGTGCGCACTCACCGGCCGTCACTGCATCACGCATCATTCGGCACACCTTTCAATAACT
TCGCTGCAATTCGCCGCAATGTCTTGTTCAGCTTAAACCCTACAATAACTCCAATGGCAA
AGCTTAGCAGGGCAATTTTTGTGCACGCCTTTCCAGTTACCAAATACTGTGTCATTTCGC
CTGTGTAAGCTCGCCGCACGTTCAACGTATGTACTATGATCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920676|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_A12.
         (522 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id Q5ZBL3
Definition tr|Q5ZBL3|Q5ZBL3_ORYSJ cDNA clone:001-110-F06, full insert sequence OS=Oryza sativa subsp. japonica
Align length 43
Score (bit) 49.7
E-value 9.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920676|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_A12.
         (522 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5ZBL3|Q5ZBL3_ORYSJ cDNA clone:001-110-F06, full insert seque...    50   9e-05
tr|A2WKK7|A2WKK7_ORYSI Putative uncharacterized protein OS=Oryza...    50   9e-05
tr|B6TC81|B6TC81_MAIZE Putative uncharacterized protein OS=Zea m...    48   3e-04
tr|Q9AX65|Q9AX65_ORYSJ Putative uncharacterized protein P0416D03...    38   0.26 
tr|A7PDR7|A7PDR7_VITVI Chromosome chr11 scaffold_13, whole genom...    37   0.77 
tr|Q9LMA2|Q9LMA2_ARATH T29M8.11 (Putative uncharacterized protei...    36   1.00 
tr|Q8LF63|Q8LF63_ARATH Putative uncharacterized protein OS=Arabi...    36   1.00 
tr|B5DT75|B5DT75_DROPS GA23309 OS=Drosophila pseudoobscura pseud...    35   2.9  
tr|B8NSS3|B8NSS3_ASPFL Asparagine synthase related protein OS=As...    35   3.0  

>tr|Q5ZBL3|Q5ZBL3_ORYSJ cDNA clone:001-110-F06, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0024G09.36 PE=4 SV=1
          Length = 91

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = -3

Query: 463 LVTGKACTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           +V+   CTKI+ +SFA+GV+VGF L + LRR AA+LLK + +D
Sbjct: 48  VVSLSTCTKISAVSFAVGVVVGFTLKRRLRRWAARLLKRIKDD 90


>tr|A2WKK7|A2WKK7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00364 PE=4 SV=1
          Length = 126

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = -3

Query: 463 LVTGKACTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           +V+   CTKI+ +SFA+GV+VGF L + LRR AA+LLK + +D
Sbjct: 83  VVSLSTCTKISAVSFAVGVVVGFTLKRRLRRWAARLLKRIKDD 125


>tr|B6TC81|B6TC81_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 92

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -3

Query: 463 LVTGKACTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           +V+   C K++ +SFAIGV+ GF L K LRR AA+LLK + +D
Sbjct: 48  VVSLSTCAKVSAISFAIGVVAGFTLKKRLRRWAARLLKRIKDD 90


>tr|Q9AX65|Q9AX65_ORYSJ Putative uncharacterized protein P0416D03.3
           OS=Oryza sativa subsp. japonica GN=P0416D03.3 PE=4 SV=1
          Length = 245

 Score = 38.1 bits (87), Expect = 0.26
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +3

Query: 354 NNFAAIRRNVLFSLNPTITPMAKLSRAIFV 443
           N+ AA RR++LFS+ PT TP AKL+  IFV
Sbjct: 65  NSLAAHRRSLLFSVKPTTTPTAKLTALIFV 94


>tr|A7PDR7|A7PDR7_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016387001
           PE=4 SV=1
          Length = 96

 Score = 36.6 bits (83), Expect = 0.77
 Identities = 15/37 (40%), Positives = 26/37 (70%)
 Frame = -3

Query: 445 CTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           C+K+  + F  GV+VG+ L + +RR A+KLL+ + +D
Sbjct: 60  CSKLCAVFFVAGVVVGYTLKRRVRRWASKLLRRLKDD 96


>tr|Q9LMA2|Q9LMA2_ARATH T29M8.11 (Putative uncharacterized protein
           At1g19240) OS=Arabidopsis thaliana GN=At1g19240 PE=2
           SV=1
          Length = 104

 Score = 36.2 bits (82), Expect = 1.00
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -3

Query: 445 CTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           C+K+  + F  GV VG+ L + +RR A+KLL+ + +D
Sbjct: 68  CSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 104


>tr|Q8LF63|Q8LF63_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 104

 Score = 36.2 bits (82), Expect = 1.00
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -3

Query: 445 CTKIALLSFAIGVIVGFKLNKTLRRIAAKLLKGVPND 335
           C+K+  + F  GV VG+ L + +RR A+KLL+ + +D
Sbjct: 68  CSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 104


>tr|B5DT75|B5DT75_DROPS GA23309 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA23309 PE=4 SV=1
          Length = 216

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 296 HLKVFLTETLTLEDGVSVFSHIMSATHLKCCFTDRLKAMKLVGCI 162
           H  VF  +   +++ +S+ S +   THL C F+D   A+K +G I
Sbjct: 126 HCSVFQADIEAIKEAISIVSKLRLDTHLVCVFSDSQAAIKALGSI 170


>tr|B8NSS3|B8NSS3_ASPFL Asparagine synthase related protein
           OS=Aspergillus flavus NRRL3357 GN=AFLA_050240 PE=4 SV=1
          Length = 537

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
 Frame = +1

Query: 133 SSTLHYNKVMIQPTNFIAFNRSVKQ----------HFK*--VADMMWENTDTPSSNVKVS 276
           +S+ H+++V     + I F RSV Q          HF    +  + WEN D+P SN KV+
Sbjct: 186 TSSTHFDEVGTTGVHMIDFTRSVMQDSPTPETGATHFNTDSIQTLPWENVDSPESNTKVA 245

Query: 277 V 279
           V
Sbjct: 246 V 246