BP920684 |
Clone id |
YMU001_000140_B08 |
Library |
YMU01 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000140_B08. |
Accession |
BP920684 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCATGTGCTGGACGATCTGATAGATTGGCTCCATGGAACATTGTATTTTACGAAGATAG ACCTGCGATCAGGCTATCATCAGATACGGATCAAACTGGAAGATGTTCCTAAGACAGGCT TCCATAGGCGTTACGGTCACTACGAGTTTTTGGTCTTGCCTTTTGGTTTGACCAATGCTC CAACTACGTTCCAGCAGATGATGAATGATCTACTGAGACCGTTTTTGGGCAACTTCATTG TTGTATTTCTCGATGATATCTTGATCTACAGCCGAAGTTTGTCTGAGCACCTAGTGCATA TACGCACTATTCTCGAAGTACTGAGAGCTGAGAAGCTTTACGCTAAGGCTTCGAAGTGTG AATTCTTTAAGAAAGAGCTTCTGTACTTGGGTCACATCATTACTCGCGATAGAAGTGATG GGGTATACAGCAGAGGCAGGTTTGGCATGTCCTGGCCATACAGAGGCTGTGACACCCATC ATTGGAAAGTTGCGCCTACATATCCAGTCCTATGTAGATGCTGAAGAATTTACATCATGC CACTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P04323 |
Definition |
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster |
Align length |
134 |
Score (bit) |
137.0 |
E-value |
3.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BJ41 |
Definition |
tr|A5BJ41|A5BJ41_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
152 |
Score (bit) |
183.0 |
E-value |
5.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920684|Adiantum capillus-veneris mRNA, clone: YMU001_000140_B08. (547 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BJ41|A5BJ41_VITVI Putative uncharacterized protein OS=Vitis... 183 5e-45 tr|A5BEK1|A5BEK1_VITVI Putative uncharacterized protein OS=Vitis... 182 1e-44 tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 174 2e-42 tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical O... 174 2e-42 tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identic... 174 2e-42 tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ... 172 8e-42 tr|Q0KIS1|Q0KIS1_SOLDE Retrotransposon gag protein OS=Solanum de... 172 1e-41 tr|Q6L3M7|Q6L3M7_SOLDE Gag-pol protein, putative OS=Solanum demi... 172 1e-41 tr|A5BWN8|A5BWN8_VITVI Putative uncharacterized protein OS=Vitis... 170 4e-41 tr|A5C5K2|A5C5K2_VITVI Putative uncharacterized protein OS=Vitis... 170 5e-41 tr|Q2HW78|Q2HW78_MEDTR RNA-directed DNA polymerase (Reverse tran... 169 7e-41 tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ... 169 7e-41 tr|Q8SA93|Q8SA93_MAIZE Putative polyprotein OS=Zea mays GN=Z195D... 168 2e-40 tr|Q0DAQ7|Q0DAQ7_ORYSJ Os06g0638300 protein OS=Oryza sativa subs... 168 2e-40 tr|Q8RU68|Q8RU68_ORYSA Putative 22 kDa kafirin cluster; Ty3-Gyps... 167 3e-40 tr|Q7G6A5|Q7G6A5_ORYSJ Putative 22 kDa kafirin cluster; Ty3-Gyps... 167 3e-40 tr|Q0DB93|Q0DB93_ORYSJ Os06g0590100 protein OS=Oryza sativa subs... 167 3e-40 tr|A5BRL2|A5BRL2_VITVI Putative uncharacterized protein OS=Vitis... 167 3e-40 tr|A5C9A7|A5C9A7_VITVI Putative uncharacterized protein OS=Vitis... 167 4e-40 tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse tran... 166 6e-40 tr|A5C2E0|A5C2E0_VITVI Putative uncharacterized protein OS=Vitis... 166 6e-40 tr|A5AQ58|A5AQ58_VITVI Putative uncharacterized protein OS=Vitis... 166 6e-40 tr|Q7XSK7|Q7XSK7_ORYSJ Os04g0191000 protein OS=Oryza sativa subs... 166 7e-40 tr|Q27TT4|Q27TT4_OROCR Reverse transcriptase (Fragment) OS=Oroba... 166 1e-39 tr|A5BBP7|A5BBP7_VITVI Putative uncharacterized protein OS=Vitis... 166 1e-39 tr|B5U9W4|B5U9W4_LOTJA Putative uncharacterized protein OS=Lotus... 165 1e-39 tr|B5U9W2|B5U9W2_LOTJA Putative uncharacterized protein OS=Lotus... 165 1e-39 tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein OS=Lotus... 165 1e-39 tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein OS=Lotus... 165 1e-39 tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein OS=Lotus... 165 1e-39
>tr|A5BJ41|A5BJ41_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044100 PE=4 SV=1 Length = 1366
Score = 183 bits (465), Expect = 5e-45 Identities = 79/152 (51%), Positives = 117/152 (76%) Frame = +3
Query: 6 VLDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPT 185 ++D+L+D LHG+ F+K+DLRSGYHQIR+ ED+PKT F GHYEFLV+PFGLTNAP Sbjct: 603 IVDELLDELHGSTIFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVMPFGLTNAPA 662
Query: 186 TFQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEF 365 TFQ +MND+ +P+L FI+VF DDIL+YS++L++H+ H++T+L++L+ +L+AK SKC F Sbjct: 663 TFQSLMNDIFKPYLRKFILVFFDDILVYSKNLADHVYHLQTVLDILKQHQLFAKKSKCCF 722
Query: 366 FKKELLYLGHIITRDRSDGVYSRGRFGMSWPY 461 E+ YLGH+I++D ++ ++WP+ Sbjct: 723 GCSEIEYLGHLISKDGVQADPTKIEAMLNWPF 754
>tr|A5BEK1|A5BEK1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026680 PE=4 SV=1 Length = 1469
Score = 182 bits (462), Expect = 1e-44 Identities = 80/152 (52%), Positives = 117/152 (76%) Frame = +3
Query: 6 VLDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPT 185 ++D+L+D LHG+ F+K+DLRSGYHQIR+ ED+PKT F GHYEFLV+PFGLTNAPT Sbjct: 636 IVDELLDELHGSTIFSKLDLRSGYHQIRVHPEDIPKTAFRTHEGHYEFLVIPFGLTNAPT 695
Query: 186 TFQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEF 365 TFQ +MND+ +P+L FI+VF DIL+YS+SL++H+ H++T+L++L+ +L+AK SKC F Sbjct: 696 TFQSLMNDIFKPYLRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAKKSKCCF 755
Query: 366 FKKELLYLGHIITRDRSDGVYSRGRFGMSWPY 461 E+ YLGH+I++D ++ ++WP+ Sbjct: 756 GCSEIEYLGHLISKDGVQADPTKIEAMLNWPF 787
>tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 Length = 923
Score = 174 bits (442), Expect = 2e-42 Identities = 78/133 (58%), Positives = 103/133 (77%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+RIK EDVPKT F RYGHY+F+V+ FGLTNAP Sbjct: 66 IDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAV 125
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + R FL F++VF+DDILIYS++ +EH H+R +L+ LR KLYAK SKCEF+ Sbjct: 126 FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFW 185
Query: 369 KKELLYLGHIITR 407 K++ +LGH++++ Sbjct: 186 LKQVSFLGHVVSK 198
>tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_41t00016 PE=4 SV=1 Length = 1515
Score = 174 bits (442), Expect = 2e-42 Identities = 76/134 (56%), Positives = 103/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 731 IDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 790
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + RP+L F+++F+DDILIYSR+ +H H+RT+L+ L+ ++LYAK SKCEF+ Sbjct: 791 FMDLMNRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFW 850
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 851 LKSVAFLGHIVSGD 864
>tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identical OS=Solanum demissum GN=SDM1_41t00017 PE=4 SV=1 Length = 1602
Score = 174 bits (442), Expect = 2e-42 Identities = 76/134 (56%), Positives = 103/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 737 IDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 796
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + RP+L F+++F+DDILIYSR+ +H H+RT+L+ L+ ++LYAK SKCEF+ Sbjct: 797 FMDLMNRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFW 856
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 857 LKSVAFLGHIVSGD 870
>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1 Length = 871
Score = 172 bits (437), Expect = 8e-42 Identities = 76/132 (57%), Positives = 104/132 (78%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G+ ++KIDL+SGYHQ++IK EDV KT F RYGHYEF V+PFGLTNAPT Sbjct: 90 IDDLFDQLQGSCVYSKIDLQSGYHQLKIKPEDVSKTAFRTRYGHYEFAVMPFGLTNAPTA 149
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F+VVF+DDIL+YSRS ++H H+R +L+VLR ++LY K KCEF+ Sbjct: 150 FMDLMNRVFKPYLDRFVVVFIDDILVYSRSDADHEEHLRIVLQVLREKELYVKLKKCEFW 209
Query: 369 KKELLYLGHIIT 404 +E+ +LGH+I+ Sbjct: 210 LREVAFLGHLIS 221
>tr|Q0KIS1|Q0KIS1_SOLDE Retrotransposon gag protein OS=Solanum demissum GN=SDM1_46t00011 PE=4 SV=1 Length = 4543
Score = 172 bits (436), Expect = 1e-41 Identities = 76/134 (56%), Positives = 103/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 513 IDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 572
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F++VF+DDILIYSR+ +H H+RT+L+ L+ ++LYAK SKCEF+ Sbjct: 573 FMDLMNRVFKPYLDMFVIVFIDDILIYSRNEGDHASHLRTVLQTLKDKELYAKFSKCEFW 632
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 633 LKSVAFLGHIVSGD 646
Score = 172 bits (436), Expect = 1e-41 Identities = 76/134 (56%), Positives = 103/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 2023 IDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 2082
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F++VF+DDILIYSR+ +H H+RT+L+ L+ ++LYAK SKCEF+ Sbjct: 2083 FMDLMNRVFKPYLDMFVIVFIDDILIYSRNEGDHASHLRTVLQTLKDKELYAKFSKCEFW 2142
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 2143 LKSVAFLGHIVSGD 2156
Score = 172 bits (436), Expect = 1e-41 Identities = 76/134 (56%), Positives = 103/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 3533 IDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 3592
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F++VF+DDILIYSR+ +H H+RT+L+ L+ ++LYAK SKCEF+ Sbjct: 3593 FMDLMNRVFKPYLDMFVIVFIDDILIYSRNEGDHASHLRTVLQTLKDKELYAKFSKCEFW 3652
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 3653 LKSVAFLGHIVSGD 3666
>tr|Q6L3M7|Q6L3M7_SOLDE Gag-pol protein, putative OS=Solanum demissum GN=SDM1_27t00008 PE=4 SV=2 Length = 1554
Score = 172 bits (435), Expect = 1e-41 Identities = 75/134 (55%), Positives = 102/134 (76%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL + L G F+KIDLRSGYHQ+R++ D+PKT F RYGHYEFLV+ FGLTNAP Sbjct: 816 IDDLFNQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAA 875
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F++VF+DDIL+YSR+ +H H+RT+L+ L+ KLYAK SKCEF+ Sbjct: 876 FMDLMNRVFKPYLDTFVIVFIDDILVYSRNEEDHASHLRTVLQTLKDNKLYAKFSKCEFW 935
Query: 369 KKELLYLGHIITRD 410 K + +LGHI++ D Sbjct: 936 LKSVAFLGHIVSGD 949
>tr|A5BWN8|A5BWN8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000074 PE=4 SV=1 Length = 757
Score = 170 bits (431), Expect = 4e-41 Identities = 74/134 (55%), Positives = 101/134 (75%) Frame = +3
Query: 9 LDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPTT 188 +DDL D L G F+KIDL+SGYHQ+R++ EDVPKT F RYGHYEFL +PFGLTNAP Sbjct: 66 IDDLFDQLQGACVFSKIDLQSGYHQLRVRSEDVPKTAFRTRYGHYEFLGMPFGLTNAPAA 125
Query: 189 FQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEFF 368 F +MN + +P+L F+VVF+DDIL+YS+S EH H+ +L+ LR +KLYAK KC+F+ Sbjct: 126 FMDLMNRVFKPYLDQFVVVFIDDILVYSKSREEHKHHLSIVLQTLRDKKLYAKLKKCDFW 185
Query: 369 KKELLYLGHIITRD 410 ++ +L H++T+D Sbjct: 186 LDKVSFLKHVVTKD 199
>tr|A5C5K2|A5C5K2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039388 PE=4 SV=1 Length = 1360
Score = 170 bits (430), Expect = 5e-41 Identities = 77/134 (57%), Positives = 101/134 (75%) Frame = +3
Query: 6 VLDDLIDWLHGTLYFTKIDLRSGYHQIRIKLEDVPKTGFHRRYGHYEFLVLPFGLTNAPT 185 V+D+L+D LHG +++K+DLRSGYHQIR+ D+PKT F GHYEF+V+PFGLTNAPT Sbjct: 634 VIDELLDELHGAKFYSKLDLRSGYHQIRVHEADIPKTAFRTHEGHYEFIVMPFGLTNAPT 693
Query: 186 TFQQMMNDLLRPFLGNFIVVFLDDILIYSRSLSEHLVHIRTILEVLRAEKLYAKASKCEF 365 TFQ +MNDL RP+L FI+VF DILIYSRS +HL H++ +L++L A L+AK SKC F Sbjct: 694 TFQSLMNDLFRPYLQKFILVFFYDILIYSRSWEDHLTHLQIVLQILSANSLFAKESKCRF 753
Query: 366 FKKELLYLGHIITR 407 ++ YL +TR Sbjct: 754 GVLZVEYLASPLTR 767
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