| BP920690 |
| Clone id |
YMU001_000140_C04 |
| Library |
YMU01 |
| Length |
609 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000140_C04. |
| Accession |
BP920690 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL3078Contig1 |
| Sequence |
TGAATACACTGAAAGATGGCAGAATGTTCCGAGTCTGCAGGAAGAATCTTGATATTGTGT TTCTTTGCTAAAGGAAGTACATAAGGGCCTCCGGCAATCAGTGTCTCTTTGTTCGCTAAA GCTATGTCTTTACCTGCTTCAATTGCAGCAACGGTTGGCTTCAAGCCAGCACAACCGACT ATGCCAGTGACAACAGAGACAGCTTCAGGGTGTCTAGCAACCTCAACTATCCCTTCGTCC CCAGCAACAATCTCAGGCTTATGATCAAGATCAGCTATGGCTTCTCTGATCTCAGGCACC AGAGACACGTTCTTGATGGCAACAAGACTTGGCTTAAATCTCCGAACCTGATCAGCAAGC AATGTGACGTTGGAGCCTGCTGCTAATGCAACAATTCTGAACTTGTCAGGGTGTTCAGCA ACTATGTCAAGAGTCTGCGTTCCAATGGACCCAGTTGATCCTATTAAAGAGAGGGGCTTG GGGCCTTCCCAAGTCTTTTTAACATCGCTGACCACAGCCCTTCCAGGCCAAGCAGGAGGT GGCGAGGGCACAGCAGAACACTTCACACCTCTTACCAAGGTTTTGGCTCTCTCTCCTTTC TGTTTAACT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9XFS9 |
| Definition |
sp|Q9XFS9|DXR_ARATH 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana |
| Align length |
194 |
| Score (bit) |
312.0 |
| E-value |
7.0e-85 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920690|Adiantum capillus-veneris mRNA, clone: YMU001_000140_C04. (609 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9XFS9|DXR_ARATH 1-deoxy-D-xylulose 5-phosphate reductoisomer... 312 7e-85 sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomer... 311 2e-84 sp|Q9XES0|DXR_MENPI 1-deoxy-D-xylulose 5-phosphate reductoisomer... 302 8e-82 sp|Q3MDL2|DXR_ANAVT 1-deoxy-D-xylulose 5-phosphate reductoisomer... 223 8e-58 sp|Q8YP49|DXR_ANASP 1-deoxy-D-xylulose 5-phosphate reductoisomer... 223 8e-58 sp|Q9RCT1|DXR_SYNP6 1-deoxy-D-xylulose 5-phosphate reductoisomer... 214 2e-55 sp|Q31N26|DXR_SYNE7 1-deoxy-D-xylulose 5-phosphate reductoisomer... 214 2e-55 sp|Q8DK30|DXR_THEEB 1-deoxy-D-xylulose 5-phosphate reductoisomer... 213 5e-55 sp|Q55663|DXR_SYNY3 1-deoxy-D-xylulose 5-phosphate reductoisomer... 211 3e-54 sp|Q2JXQ9|DXR_SYNJA 1-deoxy-D-xylulose 5-phosphate reductoisomer... 209 9e-54 sp|Q2JM39|DXR_SYNJB 1-deoxy-D-xylulose 5-phosphate reductoisomer... 207 4e-53 sp|Q319Z8|DXR_PROM9 1-deoxy-D-xylulose 5-phosphate reductoisomer... 189 1e-47 sp|Q7NID1|DXR_GLOVI 1-deoxy-D-xylulose 5-phosphate reductoisomer... 182 1e-45 sp|Q7U8C3|DXR_SYNPX 1-deoxy-D-xylulose 5-phosphate reductoisomer... 177 4e-44 sp|Q7V6J8|DXR_PROMM 1-deoxy-D-xylulose 5-phosphate reductoisomer... 177 5e-44 sp|A2C3T8|DXR_PROM1 1-deoxy-D-xylulose 5-phosphate reductoisomer... 177 5e-44 sp|Q7V0W0|DXR_PROMP 1-deoxy-D-xylulose 5-phosphate reductoisomer... 172 2e-42 sp|Q46JT6|DXR_PROMT 1-deoxy-D-xylulose 5-phosphate reductoisomer... 171 3e-42 sp|Q7VB62|DXR_PROMA 1-deoxy-D-xylulose 5-phosphate reductoisomer... 170 5e-42 sp|A2BXK2|DXR_PROM5 1-deoxy-D-xylulose 5-phosphate reductoisomer... 168 2e-41 sp|Q8KG43|DXR_CHLTE 1-deoxy-D-xylulose 5-phosphate reductoisomer... 167 3e-41 sp|Q67PA9|DXR_SYMTH 1-deoxy-D-xylulose 5-phosphate reductoisomer... 166 7e-41 sp|A5G7W2|DXR_GEOUR 1-deoxy-D-xylulose 5-phosphate reductoisomer... 162 1e-39 sp|Q3B6R4|DXR_PELLD 1-deoxy-D-xylulose 5-phosphate reductoisomer... 161 2e-39 sp|A1AQN8|DXR_PELPD 1-deoxy-D-xylulose 5-phosphate reductoisomer... 160 6e-39 sp|Q39W82|DXR_GEOMG 1-deoxy-D-xylulose 5-phosphate reductoisomer... 158 2e-38 sp|Q9KA69|DXR_BACHD 1-deoxy-D-xylulose 5-phosphate reductoisomer... 157 5e-38 sp|Q74BW4|DXR_GEOSL 1-deoxy-D-xylulose 5-phosphate reductoisomer... 155 2e-37 sp|Q6HEZ4|DXR2_BACHK 1-deoxy-D-xylulose 5-phosphate reductoisome... 155 2e-37 sp|Q819Y3|DXR2_BACCR 1-deoxy-D-xylulose 5-phosphate reductoisome... 155 2e-37
>sp|Q9XFS9|DXR_ARATH 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2 Length = 477
Score = 312 bits (800), Expect = 7e-85 Identities = 151/194 (77%), Positives = 177/194 (91%), Gaps = 4/194 (2%) Frame = -2
Query: 572 RGVKCSAV----PSPPPAWPGRAVVSDVKKTWEGPKPLSLIGSTGSIGTQTLDIVAEHPD 405 +GVKCS PPPAWPGRAV +++W+GPKP+S++GSTGSIGTQTLDIVAE+PD Sbjct: 46 KGVKCSVKVQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPD 105
Query: 404 KFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSLVPEIREAIADLDHKPEIVAGDEGIV 225 KFR+VALAAGSNVTLLADQVRRFKP+LVA++N SL+ E++EA+ADLD+K EI+ G++G++ Sbjct: 106 KFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVI 165
Query: 224 EVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPYVLPLAKKHNIKI 45 EVARHPEAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP+VLPLA KHN+KI Sbjct: 166 EVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKI 225
Query: 44 LPADSEHSAIFQCI 3 LPADSEHSAIFQCI Sbjct: 226 LPADSEHSAIFQCI 239
>sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2 Length = 473
Score = 311 bits (796), Expect = 2e-84 Identities = 149/200 (74%), Positives = 177/200 (88%) Frame = -2
Query: 602 QKGERAKTLVRGVKCSAVPSPPPAWPGRAVVSDVKKTWEGPKPLSLIGSTGSIGTQTLDI 423 Q +R +R CS +PPPAWPGRAVV +++W+GPKP+S++GSTGSIGTQTLDI Sbjct: 36 QTRDRRAVSLRRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDI 95
Query: 422 VAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSLVPEIREAIADLDHKPEIVA 243 VAE+PDKFR+VALAAGSNVTLLADQV+ FKP LVA++N SLV E++EA+AD D KPEI+ Sbjct: 96 VAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIP 155
Query: 242 GDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPYVLPLAK 63 G++G++EVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP+VLPLA+ Sbjct: 156 GEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQ 215
Query: 62 KHNIKILPADSEHSAIFQCI 3 KH +KILPADSEHSAIFQCI Sbjct: 216 KHKVKILPADSEHSAIFQCI 235
>sp|Q9XES0|DXR_MENPI 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2 Length = 470
Score = 302 bits (774), Expect = 8e-82 Identities = 149/194 (76%), Positives = 172/194 (88%), Gaps = 1/194 (0%) Frame = -2
Query: 581 TLVRGVKCSAVP-SPPPAWPGRAVVSDVKKTWEGPKPLSLIGSTGSIGTQTLDIVAEHPD 405 T + V CSA SPPPAWPGRA + TWEGPKP+S+IGSTGSIGTQTLDIVAE+PD Sbjct: 40 TAAKRVHCSAQSQSPPPAWPGRAFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPD 99
Query: 404 KFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSLVPEIREAIADLDHKPEIVAGDEGIV 225 KFRIVALAAGSNVTLLADQV+ FKP LV++K+ SL+ E++EA+A + PEI+ G++G++ Sbjct: 100 KFRIVALAAGSNVTLLADQVKAFKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMI 159
Query: 224 EVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPYVLPLAKKHNIKI 45 EVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP+VLPLAKKHN+KI Sbjct: 160 EVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKI 219
Query: 44 LPADSEHSAIFQCI 3 LPADSEHSAIFQCI Sbjct: 220 LPADSEHSAIFQCI 233
>sp|Q3MDL2|DXR_ANAVT 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3 SV=1 Length = 398
Score = 223 bits (567), Expect = 8e-58 Identities = 106/159 (66%), Positives = 136/159 (85%) Frame = -2
Query: 479 KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSL 300 K ++L+GSTGSIGTQTLDIV+++PD+FRIV LAAGSNV +LA+Q+R+F+P + AI Sbjct: 2 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEK 61
Query: 299 VPEIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIA 120 +P ++ AI DLD +P ++ G+ G++EVAR+ +A +VVTGIVGCAGL PT+AAIEAGKDIA Sbjct: 62 LPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIA 121
Query: 119 LANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 LANKETLIAGGP VLPL +KH +K+LPADSEHSAIFQC+ Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCL 160
>sp|Q8YP49|DXR_ANASP 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena sp. (strain PCC 7120) GN=dxr PE=3 SV=1 Length = 399
Score = 223 bits (567), Expect = 8e-58 Identities = 106/159 (66%), Positives = 136/159 (85%) Frame = -2
Query: 479 KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSL 300 K ++L+GSTGSIGTQTLDIV+++PD+FRIV LAAGSNV +LA+Q+R+F+P + AI Sbjct: 3 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEK 62
Query: 299 VPEIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIA 120 +P ++ AI DLD +P ++ G+ G++EVAR+ +A +VVTGIVGCAGL PT+AAIEAGKDIA Sbjct: 63 LPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIA 122
Query: 119 LANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 LANKETLIAGGP VLPL +KH +K+LPADSEHSAIFQC+ Sbjct: 123 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCL 161
>sp|Q9RCT1|DXR_SYNP6 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1 Length = 402
Score = 214 bits (546), Expect = 2e-55 Identities = 105/159 (66%), Positives = 133/159 (83%) Frame = -2
Query: 479 KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSL 300 K ++L+GSTGSIGTQTLDI+ ++PD+FR+V LAAG NV LL++Q+RR +P +VAI++ + Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQ 61
Query: 299 VPEIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIA 120 + E++ AIADLD+ P I+ G+ G+ EVAR+ +A VVTGIVGCAGL PT+AAIEAGKDIA Sbjct: 62 LSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIA 121
Query: 119 LANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 LANKETLIA GP VLPL +KH + I PADSEHSAIFQCI Sbjct: 122 LANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCI 160
>sp|Q31N26|DXR_SYNE7 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1 Length = 402
Score = 214 bits (546), Expect = 2e-55 Identities = 105/159 (66%), Positives = 133/159 (83%) Frame = -2
Query: 479 KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSL 300 K ++L+GSTGSIGTQTLDI+ ++PD+FR+V LAAG NV LL++Q+RR +P +VAI++ + Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQ 61
Query: 299 VPEIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIA 120 + E++ AIADLD+ P I+ G+ G+ EVAR+ +A VVTGIVGCAGL PT+AAIEAGKDIA Sbjct: 62 LSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIA 121
Query: 119 LANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 LANKETLIA GP VLPL +KH + I PADSEHSAIFQCI Sbjct: 122 LANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCI 160
>sp|Q8DK30|DXR_THEEB 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1 Length = 413
Score = 213 bits (543), Expect = 5e-55 Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 4/172 (2%) Frame = -2
Query: 506 DVKKTWEGP----KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRR 339 D+K + + P K L+L+GSTGSIGTQTLDIVA++PD+FR+V LAAG N+ L Q+R+ Sbjct: 7 DIKVSTDAPPKIVKALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQ 66
Query: 338 FKPSLVAIKNVSLVPEIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLK 159 F+P +V+I + +PE+ A+ADL KP++VAG+ GI VA + +A VVTGIVGCAGL Sbjct: 67 FQPEIVSIADPEQLPELEAALADLPQKPQLVAGEAGIAAVAAYGDAEVVVTGIVGCAGLV 126
Query: 158 PTVAAIEAGKDIALANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 PT+AAI+AGKDIALANKETLIAGGP VLPL +++ +K+LPADSEHSAIFQC+ Sbjct: 127 PTIAAIKAGKDIALANKETLIAGGPVVLPLLQEYGVKLLPADSEHSAIFQCL 178
>sp|Q55663|DXR_SYNY3 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1 Length = 394
Score = 211 bits (536), Expect = 3e-54 Identities = 105/160 (65%), Positives = 130/160 (81%), Gaps = 1/160 (0%) Frame = -2
Query: 479 KPLSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSL 300 K +S++GSTGSIGTQTLDIV HPD F++V LAAG NV LLA QV F+P +VAI+ Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEK 62
Query: 299 VPEIREAIADL-DHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDI 123 + +++ A+A+L D++P V G+EG+VEVAR+ +A SVVTGIVGCAGL PT+AAI AGKDI Sbjct: 63 LEDLKAAVAELTDYQPMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDI 122
Query: 122 ALANKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 ALANKETLIAG P VLPL +K +K+LPADSEHSAIFQC+ Sbjct: 123 ALANKETLIAGAPVVLPLVEKMGVKLLPADSEHSAIFQCL 162
>sp|Q2JXQ9|DXR_SYNJA 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1 Length = 392
Score = 209 bits (532), Expect = 9e-54 Identities = 100/157 (63%), Positives = 129/157 (82%) Frame = -2
Query: 473 LSLIGSTGSIGTQTLDIVAEHPDKFRIVALAAGSNVTLLADQVRRFKPSLVAIKNVSLVP 294 ++L+GSTGSIGTQTLD+VA++P++FR+V L + SNVTLLA+QV RF+P +VAI L+P Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLP 63
Query: 293 EIREAIADLDHKPEIVAGDEGIVEVARHPEAVSVVTGIVGCAGLKPTVAAIEAGKDIALA 114 E+R + + PE+VAG EG+ +VA HP A VVTGIVGCAGL PT+AAI AGKDIALA Sbjct: 64 ELRSLLTGMRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALA 123
Query: 113 NKETLIAGGPYVLPLAKKHNIKILPADSEHSAIFQCI 3 NKETL+AGGP VLPL +++ +K++P DSEHSAIFQC+ Sbjct: 124 NKETLVAGGPVVLPLVREYGVKLIPVDSEHSAIFQCL 160
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q2L8A8 |
| Definition |
tr|Q2L8A8|Q2L8A8_9LAMI 1-deoxy-D-xylulose-5-phosphate reductoisomerase OS=Picrorhiza kurrooa |
| Align length |
200 |
| Score (bit) |
317.0 |
| E-value |
3.0e-85 |
| Report |
 |