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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920694
Clone id YMU001_000140_C09
Library
Length 289
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGCAGGTACTCCCATCAAGAACCAAAAGAATGTCCTGCCCCCGATTGAAAGAACGTTAA
CAGTCTGATCACAACTTCATATCCAAAGAAGCCTTTGCAGTCTTTGAGACTATTCAAGAT
ACAAGTTTATTTCTTACTAACATGTGGAGCACCAGGCAAAGCCTTTGACACTGCCTTTTG
ACAGGCACGCAATTCCTCCATTAAGTTATAGTTAGTATGCAACCGTCCAGAAGTATCACA
AAGGACAATATCATAGCCTTCTCCAACTCCTTTTCGAACTGCCTCTAGC
■■Homology search results ■■ -
sp_hit_id P83749
Definition sp|P83749|FTSY_THEAQ Cell division protein ftsY OS=Thermus aquaticus
Align length 47
Score (bit) 52.4
E-value 7.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920694|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_C09.
         (289 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P83749|FTSY_THEAQ Cell division protein ftsY OS=Thermus aquat...    52   7e-07
sp|O30391|FTSY_NEIMC Cell division protein ftsY homolog OS=Neiss...    52   1e-06
sp|P57011|FTSY_NEIMB Cell division protein ftsY homolog OS=Neiss...    52   1e-06
sp|P57010|FTSY_NEIMA Cell division protein ftsY homolog OS=Neiss...    52   1e-06
sp|P14929|FTSY_NEIGO Cell division protein ftsY homolog OS=Neiss...    49   6e-06
sp|P47539|FTSY_MYCGE Cell division protein ftsY homolog OS=Mycop...    47   3e-05
sp|O33010|FTSY_MYCLE Cell division protein ftsY homolog OS=Mycob...    47   4e-05
sp|P51835|FTSY_BACSU Cell division protein ftsY homolog OS=Bacil...    46   7e-05
sp|P66842|FTSY_MYCTU Cell division protein ftsY homolog OS=Mycob...    45   8e-05
sp|P66843|FTSY_MYCBO Cell division protein ftsY homolog OS=Mycob...    45   8e-05
sp|O67066|FTSY_AQUAE Cell division protein ftsY homolog OS=Aquif...    45   8e-05
sp|P75362|FTSY_MYCPN Cell division protein ftsY homolog OS=Mycop...    45   1e-04
sp|Q68VX4|FTSY_RICTY Cell division protein ftsY homolog OS=Ricke...    43   6e-04
sp|Q8KA77|FTSY_BUCAP Cell division protein ftsY homolog OS=Buchn...    43   6e-04
sp|O05948|FTSY_RICPR Cell division protein ftsY homolog OS=Ricke...    42   7e-04
sp|O32861|FTSY_MYCHO Cell division protein ftsY homolog OS=Mycop...    42   7e-04
sp|P57137|FTSY_BUCAI Cell division protein ftsY homolog OS=Buchn...    40   0.004
sp|Q4UK46|FTSY_RICFE Cell division protein ftsY homolog OS=Ricke...    39   0.006
sp|Q1RKK5|FTSY_RICBR Cell division protein ftsY homolog OS=Ricke...    39   0.010
sp|Q57739|Y291_METJA Probable signal recognition particle protei...    38   0.014
sp|P37105|SRP54_BACSU Signal recognition particle protein OS=Bac...    38   0.014
sp|P44870|FTSY_HAEIN Cell division protein ftsY homolog OS=Haemo...    38   0.014
sp|Q92GB8|FTSY_RICCN Cell division protein ftsY homolog OS=Ricke...    38   0.018
sp|Q89B28|FTSY_BUCBP Cell division protein ftsY homolog OS=Buchn...    37   0.030
sp|P10121|FTSY_ECOLI Cell division protein ftsY OS=Escherichia c...    37   0.039
sp|P75054|SRP54_MYCPN Signal recognition particle protein OS=Myc...    36   0.052
sp|O25458|FTSY_HELPY Cell division protein ftsY homolog OS=Helic...    36   0.052
sp|Q55311|SRP54_SYNE7 Signal sequence-binding protein OS=Synecho...    35   0.088
sp|Q9ZL80|FTSY_HELPJ Cell division protein ftsY homolog OS=Helic...    35   0.11 
sp|Q8K9F7|SRP54_BUCAP Signal recognition particle protein OS=Buc...    35   0.15 

>sp|P83749|FTSY_THEAQ Cell division protein ftsY OS=Thermus
           aquaticus GN=ftsY PE=1 SV=2
          Length = 304

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAP 145
           +AV+     GYD++  DT+GRLHT +NLMEEL+  ++A++KA P  P
Sbjct: 175 DAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEP 221


>sp|O30391|FTSY_NEIMC Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup C GN=ftsY PE=3 SV=1
          Length = 421

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV+     G DIVL DT+GRL T  +LMEE++  ++ + KA+P APH
Sbjct: 293 DAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPH 340


>sp|P57011|FTSY_NEIMB Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup B GN=ftsY PE=3 SV=1
          Length = 421

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV+     G DIVL DT+GRL T  +LMEE++  ++ + KA+P APH
Sbjct: 293 DAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPH 340


>sp|P57010|FTSY_NEIMA Cell division protein ftsY homolog
           OS=Neisseria meningitidis serogroup A GN=ftsY PE=3 SV=1
          Length = 421

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV+     G DIVL DT+GRL T  +LMEE++  ++ + KA+P APH
Sbjct: 293 DAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPH 340


>sp|P14929|FTSY_NEIGO Cell division protein ftsY homolog
           OS=Neisseria gonorrhoeae GN=ftsY PE=1 SV=2
          Length = 416

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 21/37 (56%), Positives = 29/37 (78%)
 Frame = -2

Query: 252 DIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           DIVL DT+GRL T  +LMEE++  ++ + KA+PGAPH
Sbjct: 299 DIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPH 335


>sp|P47539|FTSY_MYCGE Cell division protein ftsY homolog
           OS=Mycoplasma genitalium GN=ftsY PE=3 SV=1
          Length = 346

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -2

Query: 279 VRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAP 145
           V+KG+ + YD VLCDTSGRL    NLM EL+   + + K     P
Sbjct: 211 VKKGIDDKYDFVLCDTSGRLQNKLNLMNELQKIYQIIQKVSGSEP 255


>sp|O33010|FTSY_MYCLE Cell division protein ftsY homolog
           OS=Mycobacterium leprae GN=ftsY PE=3 SV=1
          Length = 430

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/41 (48%), Positives = 30/41 (73%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSK 163
           +AV KG+G G D+V+ DT+GRLHT   LM+EL   ++ V++
Sbjct: 304 DAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTR 344


>sp|P51835|FTSY_BACSU Cell division protein ftsY homolog OS=Bacillus
           subtilis GN=ftsY PE=1 SV=2
          Length = 329

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV        D+++CDT+GRL    NLM+EL   ++ + + +P APH
Sbjct: 193 DAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH 240


>sp|P66842|FTSY_MYCTU Cell division protein ftsY homolog
           OS=Mycobacterium tuberculosis GN=ftsY PE=3 SV=1
          Length = 422

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSK 163
           +AV KG+  G D+VL DT+GRLHT   LM+EL   ++ V++
Sbjct: 296 DAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTR 336


>sp|P66843|FTSY_MYCBO Cell division protein ftsY homolog
           OS=Mycobacterium bovis GN=ftsY PE=3 SV=1
          Length = 422

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSK 163
           +AV KG+  G D+VL DT+GRLHT   LM+EL   ++ V++
Sbjct: 296 DAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTR 336
tr_hit_id A9SNI6
Definition tr|A9SNI6|A9SNI6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 48
Score (bit) 77.8
E-value 3.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920694|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_C09.
         (289 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SNI6|A9SNI6_PHYPA Predicted protein OS=Physcomitrella paten...    78   3e-13
tr|Q5JK67|Q5JK67_ORYSJ cDNA clone:001-017-E11, full insert seque...    77   3e-13
tr|Q5JK66|Q5JK66_ORYSJ cDNA clone:006-207-D11, full insert seque...    77   3e-13
tr|Q0JFW3|Q0JFW3_ORYSJ Os01g0958100 protein (Fragment) OS=Oryza ...    77   3e-13
tr|B8A9J0|B8A9J0_ORYSI Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|Q7XAF9|Q7XAF9_MAIZE Chloroplast SRP receptor cpFtsY OS=Zea ma...    77   4e-13
tr|B6TZA9|B6TZA9_MAIZE Cell division protein ftsY OS=Zea mays PE...    77   4e-13
tr|Q9SWS7|Q9SWS7_ARATH Chloroplast SRP receptor homolog, alpha s...    76   1e-12
tr|O80842|O80842_ARATH Putative signal recognition particle rece...    76   1e-12
tr|A7PXY2|A7PXY2_VITVI Chromosome chr15 scaffold_37, whole genom...    74   3e-12
tr|B4UDF5|B4UDF5_ANASK Signal recognition particle-docking prote...    65   1e-09
tr|B8JD35|B8JD35_9DELT Signal recognition particle-docking prote...    65   1e-09
tr|Q2INR8|Q2INR8_ANADE Signal recognition particle-docking prote...    65   2e-09
tr|Q6MNR5|Q6MNR5_BDEBA Signal recognition particle-docking prote...    63   8e-09
tr|A7H885|A7H885_ANADF Signal recognition particle-docking prote...    63   8e-09
tr|Q726P7|Q726P7_DESVH Signal recognition particle-docking prote...    62   1e-08
tr|A1VA74|A1VA74_DESVV Signal recognition particle-docking prote...    62   1e-08
tr|Q1D0F1|Q1D0F1_MYXXD Signal recognition particle-docking prote...    61   2e-08
tr|Q1H3D6|Q1H3D6_METFK Signal recognition particle-docking prote...    60   4e-08
tr|Q6AJ15|Q6AJ15_DESPS Probable cell division protein FtsY OS=De...    59   9e-08
tr|Q315N5|Q315N5_DESDG Signal recognition particle-docking prote...    59   9e-08
tr|B6YMF6|B6YMF6_9BACT Signal recognition particle-docking prote...    59   2e-07
tr|A8J831|A8J831_CHLRE Chloroplast SRP receptor (Fragment) OS=Ch...    58   3e-07
tr|Q74E32|Q74E32_GEOSL Cell division protein FtsY OS=Geobacter s...    57   4e-07
tr|A9GEW9|A9GEW9_SORC5 Cell division membrane protein OS=Sorangi...    57   5e-07
tr|Q1NXJ3|Q1NXJ3_9DELT Cell division transporter substrate-bindi...    56   1e-06
tr|Q1NQX1|Q1NQX1_9DELT Cell division transporter substrate-bindi...    56   1e-06
tr|B1Y3Q5|B1Y3Q5_LEPCP Signal recognition particle-docking prote...    55   2e-06
tr|A0LL38|A0LL38_SYNFM Signal recognition particle-docking prote...    55   2e-06
tr|Q0YHK6|Q0YHK6_9DELT Signal recognition particle-docking prote...    55   2e-06

>tr|A9SNI6|A9SNI6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_132686 PE=4 SV=1
          Length = 383

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AVR+ V E +D+VLCDTSGRLHTNYNLMEELR C++AVSKAL  AP+
Sbjct: 255 QAVRRAVEEDFDVVLCDTSGRLHTNYNLMEELRGCKRAVSKALSSAPN 302


>tr|Q5JK67|Q5JK67_ORYSJ cDNA clone:001-017-E11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1294_F06.26-1 PE=2
           SV=1
          Length = 363

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 235 QAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN 282


>tr|Q5JK66|Q5JK66_ORYSJ cDNA clone:006-207-D11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1294_F06.26-2 PE=2
           SV=1
          Length = 199

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 71  QAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN 118


>tr|Q0JFW3|Q0JFW3_ORYSJ Os01g0958100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0958100 PE=4 SV=1
          Length = 347

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 219 QAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN 266


>tr|B8A9J0|B8A9J0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05275 PE=4 SV=1
          Length = 363

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 235 QAVKRGKREGFDLVLCDTSGRLHTNYGLMEELVSCKKVIAKALPGAPN 282


>tr|Q7XAF9|Q7XAF9_MAIZE Chloroplast SRP receptor cpFtsY OS=Zea mays
           GN=csr1 PE=2 SV=1
          Length = 362

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 234 QAVKRGKREGFDVVLCDTSGRLHTNYGLMEELVSCKKVLAKALPGAPN 281


>tr|B6TZA9|B6TZA9_MAIZE Cell division protein ftsY OS=Zea mays PE=2
           SV=1
          Length = 362

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 33/48 (68%), Positives = 43/48 (89%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EG+D+VLCDTSGRLHTNY LMEEL +C+K ++KALPGAP+
Sbjct: 234 QAVKRGKREGFDVVLCDTSGRLHTNYGLMEELVSCKKVLAKALPGAPN 281


>tr|Q9SWS7|Q9SWS7_ARATH Chloroplast SRP receptor homolog, alpha
           subunit CPFTSY OS=Arabidopsis thaliana PE=2 SV=1
          Length = 366

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EGYD+VLCDTSGRLHTNY+LMEEL AC+KAV K + GAP+
Sbjct: 238 KAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPN 285


>tr|O80842|O80842_ARATH Putative signal recognition particle
           receptor (Alpha subunit) (Putative signal recognition
           particle receptor alpha subunit) (Chloroplast FtsY
           homolog) OS=Arabidopsis thaliana GN=ftsY PE=2 SV=2
          Length = 366

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  EGYD+VLCDTSGRLHTNY+LMEEL AC+KAV K + GAP+
Sbjct: 238 KAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPN 285


>tr|A7PXY2|A7PXY2_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026227001
           PE=4 SV=1
          Length = 367

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = -2

Query: 285 EAVRKGVGEGYDIVLCDTSGRLHTNYNLMEELRACQKAVSKALPGAPH 142
           +AV++G  +G+DIVLCDTSGRLHTNY+LMEEL AC+KAV K + GAP+
Sbjct: 239 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELIACKKAVGKVVSGAPN 286