BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920696|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_C12.
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7SYD9|INT6_DANRE Integrator complex subunit 6 OS=Danio rerio...    31   3.8  
sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus GN=F...    30   6.5  
sp|Q6CQ49|MED16_KLULA Mediator of RNA polymerase II transcriptio...    30   8.4  
sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis...    30   8.6  

>sp|Q7SYD9|INT6_DANRE Integrator complex subunit 6 OS=Danio rerio
           GN=ints6 PE=2 SV=1
          Length = 892

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 387 STALSAQHA--FKGLL--VTTKVPLYFKVSNFKDFEEFPIALL 503
           S ALS  H   FK LL  +T +VPL     NFK+F  F IALL
Sbjct: 494 SNALSLAHRRDFKQLLQGITGEVPLRLIDMNFKEFAGFQIALL 536


>sp|Q06194|FA8_MOUSE Coagulation factor VIII OS=Mus musculus GN=F8
            PE=2 SV=1
          Length = 2319

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 315  PASWPESQHRHFCMAIENAWKYSISTALSAQHAFKGLLVTTKVPLYFKVSNFKDFEE 485
            P S+ +    +F  A+E  W Y +ST+    H  +    +  VP + KV  F++F +
Sbjct: 1677 PRSFQQKTRHYFIAAVERLWDYGMSTS----HVLRNRYQSDNVPQFKKVV-FQEFTD 1728


>sp|Q6CQ49|MED16_KLULA Mediator of RNA polymerase II transcription
           subunit 16 OS=Kluyveromyces lactis GN=SIN4 PE=3 SV=1
          Length = 956

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = +3

Query: 327 PESQHRHFCMAIENAWKYSISTALSAQHAFKGLLVTTKVPLYFKVSNFKDFEEFPI 494
           P+++   +   I+N     +    S +HAF  +     V  ++++SN KDF++  +
Sbjct: 205 PQTEPPFYKNHIQNCTPIGVFHPASVKHAFTAIRTNGMVDFWYQLSNSKDFKKISL 260


>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis
           thaliana GN=BHLH36 PE=2 SV=1
          Length = 174

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -1

Query: 199 GLSLSLCSRTCT-RTRFSWHLQLVSEQGLCL 110
           G+ + L SR C  + RFS  LQ++SE GLCL
Sbjct: 104 GVEIMLSSRCCGGQPRFSSVLQVLSEYGLCL 134

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920696|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_C12.
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******