BP920697
Clone id YMU001_000140_D02
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGAGGTTGAAGCATTGAAACGTTCAATGCAGAGTGGAATGGCACAAGCAATGAAAGAGC
AGGCCCAGCTAAGAGAGGAGATGCAGTATCAATATCGGCTCGGAAATTTCGAGGCTGCGA
GTGCTATTCAAAGGCGGCTGGATCCTGCTGCTTCGGGAGCACCATTGAAGTGAATGCAGA
GCTGGGAGGAGCATTCACTTTGCTTGTTTTTGTTTGCAGGCAGAAAATGTGATTAACAGC
ATACTTACAAAAGCTTTTACAGCAGGGAAAAGCGAGTGTGGCCGTACAGCGATCATGAAA
GCAGAGCTAACAAACAGGCGCCGATGCTTTTCAAAGGAAGCTTTTCTGTTTTGAGTAGTC
GCTTTTCAACTTGACAGTTTTAGTGGTCAAATTGCTCGATGCTGAGATAAACTTACACTT
GGGAAAGAGGGAAGCACAGAAGGCCTTTTCCACCATTAACTGATTATGCTTATTCGAGTA
GTGTTACGGGCTTCAAGAGCTATAAAGCTGTA
■■Homology search results ■■ -
sp_hit_id P37718
Definition sp|P37718|ACSC_ACEXY Cellulose synthase operon protein C OS=Acetobacter xylinus
Align length 53
Score (bit) 33.9
E-value 0.45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920697|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D02.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P37718|ACSC_ACEXY Cellulose synthase operon protein C OS=Acet... 34 0.45
sp|Q9U2R0|BIN3D_CAEEL Probable methyltransferase Y17G7B.18 OS=Ca... 31 2.9
sp|P14547|POL2_BRSV RNA2 polyprotein OS=Beet ringspot virus PE=3... 30 8.5

>sp|P37718|ACSC_ACEXY Cellulose synthase operon protein C
OS=Acetobacter xylinus GN=acsC PE=1 SV=1
Length = 1302

Score = 33.9 bits (76), Expect = 0.45
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAASGA 161
+ E ++S+QS A L E +YQ +GN +AA QRRL AA G+
Sbjct: 79 QYENARQSLQSAARLAPDSVDLLEAEGEYQSHIGNRDAALDTQRRLHQAAPGS 131


>sp|Q9U2R0|BIN3D_CAEEL Probable methyltransferase Y17G7B.18
OS=Caenorhabditis elegans GN=Y17G7B.18 PE=2 SV=1
Length = 378

Score = 31.2 bits (69), Expect = 2.9
Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Frame = +3

Query: 48 AMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAASGAPLK*MQS-WEEHSLCLFLFAGR 224
A + + Q E +YR GNF+ I RL+P S L Q W EH L +
Sbjct: 102 AAENRKQKTEYFNKKYRYGNFDRYYGI--RLNPGESDKRLSVFQKDWFEHKQALDIGCNA 159

Query: 225 KCD*QHTYKSFYSRE---------------KRVWPYSDHESRANKQAPMLFKGSFSVLSS 359
K F R K + Y DHE+ + + P F F +S
Sbjct: 160 GFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPASFGVQFGTVSQ 219

Query: 360 R 362
R
Sbjct: 220 R 220


>sp|P14547|POL2_BRSV RNA2 polyprotein OS=Beet ringspot virus PE=3 SV=1
Length = 1357

Score = 29.6 bits (65), Expect = 8.5
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2

Query: 74 RGDAVSISARKFRGCECYSKAAGSCCFGSTIEVNAELGGAFTLLVFVCRQKM--*LTAYL 247
R S+S+R +C KA GS FG TIE+ A + L VF K+ T
Sbjct: 819 RASTSSVSSRLDES-KCNLKAGGSYAFGETIELPATVTPGTVLAVFNIFDKIQETNTKVC 877

Query: 248 QKLLQQGKAS 277
K L+QG S
Sbjct: 878 SKWLEQGYVS 887


tr_hit_id Q7X8Y1
Definition tr|Q7X8Y1|Q7X8Y1_ORYSJ Os04g0530300 protein OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 86.7
E-value 6.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920697|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D02.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7X8Y1|Q7X8Y1_ORYSJ Os04g0530300 protein OS=Oryza sativa subs... 87 6e-16
tr|Q00RI9|Q00RI9_ORYSA OSIGBa0155K17.11 protein OS=Oryza sativa ... 87 6e-16
tr|B8ASD2|B8ASD2_ORYSI Putative uncharacterized protein OS=Oryza... 87 6e-16
tr|A3AVT6|A3AVT6_ORYSJ Putative uncharacterized protein OS=Oryza... 87 6e-16
tr|B6U2G4|B6U2G4_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15
tr|B4FF82|B4FF82_MAIZE Putative uncharacterized protein OS=Zea m... 84 3e-15
tr|A7P1K4|A7P1K4_VITVI Chromosome chr19 scaffold_4, whole genome... 83 7e-15
tr|A7P1K3|A7P1K3_VITVI Chromosome chr19 scaffold_4, whole genome... 82 1e-14
tr|Q8LCP8|Q8LCP8_ARATH Putative uncharacterized protein OS=Arabi... 72 1e-11
tr|Q9FHZ6|Q9FHZ6_ARATH Arabidopsis thaliana genomic DNA, chromos... 68 3e-10
tr|A7PSI0|A7PSI0_VITVI Chromosome chr6 scaffold_28, whole genome... 60 6e-08
tr|A9S960|A9S960_PHYPA Predicted protein OS=Physcomitrella paten... 60 8e-08
tr|B8CDB5|B8CDB5_THAPS Putative uncharacterized protein OS=Thala... 40 0.087
tr|A0DT69|A0DT69_PARTE Chromosome undetermined scaffold_62, whol... 38 0.33
tr|A0CQP5|A0CQP5_PARTE Chromosome undetermined scaffold_24, whol... 38 0.33
tr|Q76KJ7|Q76KJ7_ACEXY Cellulose synthase subunit C OS=Acetobact... 34 4.8
tr|Q93TW7|Q93TW7_STIAU MxaE OS=Stigmatella aurantiaca GN=mxaE PE... 33 6.2
tr|Q5FXP1|Q5FXP1_9HIV1 Protein Tat OS=Human immunodeficiency vir... 33 8.1

>tr|Q7X8Y1|Q7X8Y1_ORYSJ Os04g0530300 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0074L08.19 PE=4 SV=2
Length = 357

Score = 86.7 bits (213), Expect = 6e-16
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EV ALKRSMQ+GMAQAMKEQA+LREEM YQYRLGNFEAA+AIQ+RLDP A
Sbjct: 305 EVAALKRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAAIQKRLDPDA 354


>tr|Q00RI9|Q00RI9_ORYSA OSIGBa0155K17.11 protein OS=Oryza sativa
GN=OSIGBa0155K17.11 PE=4 SV=1
Length = 342

Score = 86.7 bits (213), Expect = 6e-16
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EV ALKRSMQ+GMAQAMKEQA+LREEM YQYRLGNFEAA+AIQ+RLDP A
Sbjct: 290 EVAALKRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAAIQKRLDPDA 339


>tr|B8ASD2|B8ASD2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16745 PE=4 SV=1
Length = 357

Score = 86.7 bits (213), Expect = 6e-16
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EV ALKRSMQ+GMAQAMKEQA+LREEM YQYRLGNFEAA+AIQ+RLDP A
Sbjct: 305 EVAALKRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAAIQKRLDPDA 354


>tr|A3AVT6|A3AVT6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_014908 PE=4 SV=1
Length = 343

Score = 86.7 bits (213), Expect = 6e-16
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EV ALKRSMQ+GMAQAMKEQA+LREEM YQYRLGNFEAA+AIQ+RLDP A
Sbjct: 291 EVAALKRSMQTGMAQAMKEQARLREEMMYQYRLGNFEAAAAIQKRLDPDA 340


>tr|B6U2G4|B6U2G4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 341

Score = 84.3 bits (207), Expect = 3e-15
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EVEALKRSMQ+G+AQ MKEQA+LREEM YQYRLGNF+AA+AIQ+RLDP A
Sbjct: 289 EVEALKRSMQAGLAQDMKEQARLREEMNYQYRLGNFQAAAAIQKRLDPDA 338


>tr|B4FF82|B4FF82_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 337

Score = 84.3 bits (207), Expect = 3e-15
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDPAA 152
EVEALKRSMQ+G+AQ MKEQA+LREEM YQYRLGNF+AA+AIQ+RLDP A
Sbjct: 285 EVEALKRSMQAGLAQDMKEQARLREEMNYQYRLGNFQAAAAIQKRLDPDA 334


>tr|A7P1K4|A7P1K4_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027651001
PE=4 SV=1
Length = 329

Score = 83.2 bits (204), Expect = 7e-15
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDP 146
+VE LKRSMQSGMAQAMKEQAQLREEM YQY++GN EAA+AIQRRLDP
Sbjct: 278 QVEELKRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDP 325


>tr|A7P1K3|A7P1K3_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027650001
PE=4 SV=1
Length = 166

Score = 82.4 bits (202), Expect = 1e-14
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +3

Query: 6 VEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDP 146
+E LK SMQSGMAQAMKEQAQLREEM YQY++GNFEAA+AIQRRLDP
Sbjct: 116 LEELKHSMQSGMAQAMKEQAQLREEMAYQYKVGNFEAAAAIQRRLDP 162


>tr|Q8LCP8|Q8LCP8_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 351

Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFEAASAIQRRLDP 146
EV ALKRSM+ GMAQAMKEQA+L+EEM Y Y++G+ E A+AIQRRLDP
Sbjct: 300 EVLALKRSMEGGMAQAMKEQARLKEEMVYLYKIGDMEGAAAIQRRLDP 347


>tr|Q9FHZ6|Q9FHZ6_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MGN6 OS=Arabidopsis thaliana PE=4 SV=1
Length = 339

Score = 67.8 bits (164), Expect = 3e-10
Identities = 35/49 (71%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = +3

Query: 3 EVEALKRSMQSGMAQAMKEQAQLREEMQYQYRLGNFE-AASAIQRRLDP 146
EV ALKRSM+ GMAQAMKEQA+L+EEM Y Y++G+ E A+AIQRRLDP
Sbjct: 287 EVLALKRSMEGGMAQAMKEQARLKEEMVYLYKIGDMEVGAAAIQRRLDP 335