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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920698
Clone id YMU001_000140_D03
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAGTGAACCTGAGCTGAAGAGTTTGACTTTAGGTGAGAATCTCCTTCTTGAGTGCACCAC
TATCTGCGAGAAGTACCTTGAAATCAAGGGGATACCTCAGGCCTCGATGTGCAGGTTTGG
CATCCAAGAATTTGATTAATTCCTCTTTCGATTTCCTACTTAGCTTCACTGCCAAGGCCT
TAAGAGCAAAAGTAGCCCTACCACAGAGCAACAGGGATACTTTTTCACAGAATTTCTAAA
GCCTAATCAAGTGACGTTCATCAAATCGAAGCAGTTTTAGGTGTGGTTTTTGAGTGAGAA
CAGCAAGTAGTAGGTGCCCTCAATTCATTTCAAATGAAGAATGCATTGAAAGCTTTAAAG
ATGTAAAGTAGAAAGTGCGTTGAAACGTTAGGAAGTCCTGGCGATCACTATTTGGAAGGT
CAAACGACAACAAATTAACTGTATACATGAGGGCTTCATATGCCCTCCGTGCTAAAAAAA
AAAAAAAAAAAAAAAAAAAACAAAAA
■■Homology search results ■■ -
sp_hit_id O07595
Definition sp|O07595|NPD_BACSU NAD-dependent deacetylase OS=Bacillus subtilis
Align length 39
Score (bit) 29.3
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920698|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D03.
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O07595|NPD_BACSU NAD-dependent deacetylase OS=Bacillus subtil...    29   9.3  
sp|Q6DCT2|CJ076_XENLA UPF0668 protein C10orf76 homolog OS=Xenopu...    29   9.3  

>sp|O07595|NPD_BACSU NAD-dependent deacetylase OS=Bacillus subtilis
           GN=npdA PE=3 SV=1
          Length = 247

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = -2

Query: 394 FLTFQRTFY--FTSL-KLSMHSSFEMN*GHLLLAVLTQK 287
           FL++ R F+  F  L ++ M  SFE N GHLLLA L ++
Sbjct: 53  FLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQ 91


>sp|Q6DCT2|CJ076_XENLA UPF0668 protein C10orf76 homolog OS=Xenopus
           laevis PE=2 SV=2
          Length = 689

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 274 LLRFDERHLIRL*KFCEKVSLLLCGRATFALKALAVKL 161
           L+ FD+  L R+    E + LLLCG  + +LK+L +KL
Sbjct: 127 LMGFDKAEL-RMKNLMESLDLLLCGDGSESLKSLCLKL 163
tr_hit_id Q89NY6
Definition tr|Q89NY6|Q89NY6_BRAJA Blr3697 protein OS=Bradyrhizobium japonicum
Align length 47
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920698|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D03.
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q89NY6|Q89NY6_BRAJA Blr3697 protein OS=Bradyrhizobium japonic...    35   2.4  
tr|A6LDG3|A6LDG3_PARD8 Hemolysin-related protein OS=Parabacteroi...    34   4.2  
tr|A5BCQ7|A5BCQ7_VITVI Putative uncharacterized protein OS=Vitis...    33   7.1  
tr|B7K8Y2|B7K8Y2_9CHRO Putative uncharacterized protein OS=Cyano...    33   9.3  

>tr|Q89NY6|Q89NY6_BRAJA Blr3697 protein OS=Bradyrhizobium japonicum
           GN=blr3697 PE=4 SV=1
          Length = 140

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = -2

Query: 220 VSLLLCGRATFALKALAVKLSRKSKEELIKFLDAKPAHRGLRYPLDF 80
           VS+LL G ATF  KAL  + SR+ +E     + A    RGL + LDF
Sbjct: 28  VSMLLGGAATFLQKALVAQESRRFEEGHEHLMKATAILRGLSHNLDF 74


>tr|A6LDG3|A6LDG3_PARD8 Hemolysin-related protein OS=Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
           GN=BDI_1992 PE=4 SV=1
          Length = 450

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = -2

Query: 319 GHLLLAVLTQKPHLKLLRFDERHLIRL*KFCEKVSLLLCGRATFALKALAVKLSRKSKEE 140
           G ++  +  QK  L+ +RF    L  L +FC   S +L    +   KALA K    S +E
Sbjct: 131 GEIMPKIYAQKNSLRFVRFSASVLSGLERFCRPFSKILVNSTSVINKALAKKKYDISVDE 190

Query: 139 LIKFLD 122
           L K L+
Sbjct: 191 LSKALE 196


>tr|A5BCQ7|A5BCQ7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_032805 PE=4 SV=1
          Length = 1593

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -2

Query: 274  LLRFDERHLIRL*KFCEKVSLLLCGRATFALKALAVKLSRKSKEELIKFLDAKPAHRGLR 95
            +L +++ H + + K   K+S  LC       K +  +  +KS EEL KFL   P  R   
Sbjct: 1069 VLNWEKCHFMEVIKNFSKISKPLCELLVKDAKFVWDEKCQKSFEELKKFLTTTPIVRAPN 1128

Query: 94   YPLDFKVL 71
            + L FKV+
Sbjct: 1129 WKLPFKVM 1136


>tr|B7K8Y2|B7K8Y2_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. PCC 7424 GN=PCC7424_4387 PE=4 SV=1
          Length = 73

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 118 KPAHRGLRYPLDFKVLLADSGALKKEILT*SQTLQ 14
           KP  RGLRYP++F + L  SG   +EIL   + L+
Sbjct: 19  KPCIRGLRYPVEFILELLSSGMTNEEILADYEDLE 53