BP920700 |
Clone id |
YMU001_000140_D05 |
Library |
YMU01 |
Length |
469 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000140_D05. |
Accession |
BP920700 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL382Contig1 |
Sequence |
CTGCAGCAAATGTGAGAGTTTTGGTTAGCACGCAAGCACCAAGTCCCATGAGAGCCACAG CTCCGAGAGGGAGAGGTTGGGTGATGATGCCCACAATAGTGGCGAGGAAAATCGAAAGAA GCTGCCAAGCATTCTTTGAAACTCCCGAGGGAGCAGGAATGAACCAGATCGCAACTACTG TAGCTATAGAAATAAGCAAGGATTTCATGTCGGCGCCTTGCCATTGCTGGGTGGAAGGAG GGGCATGAGCAGGGGCCGCAGGAACAGAGGCAGCAGCAGCACTCGCCGTTATTGTCAGCT CCCTGTTCCTACTGCCAGTCTTCGAAGAGACGAATCTCTGTCTCAAAGCGGAGGTGCCAT AGCTGTGGCAGAGAGAGGATCCAAGCTTGAGAGGGGAATAATTTCTAGATCCGATGGCGA GCTGGCCTCCAAGGATCTTGCTGGTAGAGCTGCTACTACAGCAGATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41364 |
Definition |
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea |
Align length |
76 |
Score (bit) |
122.0 |
E-value |
6.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920700|Adiantum capillus-veneris mRNA, clone: YMU001_000140_D05. (469 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chlorop... 122 6e-28 sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillu... 77 4e-14 sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia ... 50 5e-06 sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain... 49 1e-05 sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7... 49 1e-05 sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella... 46 7e-05 sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella... 46 7e-05 sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella... 46 7e-05 sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escheric... 46 7e-05 sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escheric... 46 7e-05 sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemo... 46 9e-05 sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella... 45 1e-04 sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escheric... 45 1e-04 sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escheric... 45 2e-04 sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escheric... 45 2e-04 sp|Q18034|NFX1_CAEEL Transcriptional repressor NF-X1 homolog OS=... 30 4.0 sp|Q9WUL6|M3K14_MOUSE Mitogen-activated protein kinase kinase ki... 30 4.1 sp|P40900|ISP4_SCHPO Sexual differentiation process protein isp4... 30 4.1 sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 ... 30 5.2 sp|Q9IBD1|CELF3_DANRE CUG-BP- and ETR-3-like factor 3 OS=Danio r... 30 5.3 sp|Q8C4X2|KC1G3_MOUSE Casein kinase I isoform gamma-3 OS=Mus mus... 30 6.9 sp|Q9LPW2|FBK2_ARATH Putative F-box/Kelch-repeat protein At1g128... 29 8.9 sp|O88286|WIZ_MOUSE Protein Wiz OS=Mus musculus GN=Wiz PE=1 SV=2 29 9.1 sp|O95785|WIZ_HUMAN Protein Wiz OS=Homo sapiens GN=WIZ PE=1 SV=2 29 9.1 sp|P40477|NU159_YEAST Nucleoporin NUP159 OS=Saccharomyces cerevi... 29 9.1
>sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1 Length = 569
Score = 122 bits (307), Expect = 6e-28 Identities = 61/76 (80%), Positives = 66/76 (86%) Frame = -1
Query: 229 QQWQGADMKSLLISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVAL 50 Q WQGA +K LL SI T V IWFIP P GVS+NAWQLL+IFL+TIVGIITQPLPLGAVAL Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 49 MGLGACVLTKTLTFAA 2 MGLGA VLTKTLTF+A Sbjct: 157 MGLGASVLTKTLTFSA 172
>sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1 Length = 478
Score = 77.0 bits (188), Expect = 4e-14 Identities = 34/63 (53%), Positives = 47/63 (74%) Frame = -1
Query: 199 LLISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLTK 20 LLI++A + IWFIPAPSG+ AW L +IF+ATI+G I++PLP+GA+A+ L LT Sbjct: 18 LLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTG 77
Query: 19 TLT 11 TL+ Sbjct: 78 TLS 80
>sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1 Length = 477
Score = 50.1 bits (118), Expect = 5e-06 Identities = 23/58 (39%), Positives = 38/58 (65%) Frame = -1
Query: 199 LLISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVL 26 L++ +A I F+PAP+G+S+ AW L I+LA IVG++ +P P V L+ + A ++ Sbjct: 9 LILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMV 66
>sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain K12) GN=citT PE=1 SV=1 Length = 487
Score = 48.5 bits (114), Expect = 1e-05 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -1
Query: 199 LLISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVL 26 LL + + ++ IP P G+ AW ++F+A IVG+I +P+P A++ + + CV+ Sbjct: 11 LLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTICVI 68
>sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7 GN=citT PE=3 SV=1 Length = 487
Score = 48.5 bits (114), Expect = 1e-05 Identities = 19/58 (32%), Positives = 35/58 (60%) Frame = -1
Query: 199 LLISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVL 26 LL + + ++ IP P G+ AW ++F+A IVG+I +P+P A++ + + CV+ Sbjct: 11 LLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTICVI 68
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1 Length = 487
Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -1
Query: 196 LISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 20 L +A + I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 19 TLTFA 5 L F+ Sbjct: 71 WLLFS 75
>sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ttdT PE=3 SV=1 Length = 487
Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -1
Query: 196 LISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 20 L +A + I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 19 TLTFA 5 L F+ Sbjct: 71 WLLFS 75
>sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella boydii serotype 4 (strain Sb227) GN=ttdT PE=3 SV=1 Length = 487
Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -1
Query: 196 LISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 20 L +A + I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 19 TLTFA 5 L F+ Sbjct: 71 WLLFS 75
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -1
Query: 196 LISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 20 L +A + I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 19 TLTFA 5 L F+ Sbjct: 71 WLLFS 75
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1 Length = 487
Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -1
Query: 196 LISIATVVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 20 L +A + I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 19 TLTFA 5 L F+ Sbjct: 71 WLLFS 75
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NVU0 |
Definition |
tr|A9NVU0|A9NVU0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
76 |
Score (bit) |
123.0 |
E-value |
5.0e-27 |
Report |
|