BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920704|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D09.
         (503 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BSA9|TM175_HUMAN Transmembrane protein 175 OS=Homo sapiens ...    32   2.2  
sp|Q7UZK8|TIG_PROMP Trigger factor OS=Prochlorococcus marinus su...    31   2.9  

>sp|Q9BSA9|TM175_HUMAN Transmembrane protein 175 OS=Homo sapiens
           GN=TMEM175 PE=1 SV=1
          Length = 504

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -1

Query: 218 GREHVLAYARVAFFNCSTLISPSSEHSILRF 126
           GREHVL +A++A + C++L++ +S   + RF
Sbjct: 413 GREHVLMFAKLALYPCASLLAFASTCLLSRF 443


>sp|Q7UZK8|TIG_PROMP Trigger factor OS=Prochlorococcus marinus
           subsp. pastoris (strain CCMP1378 / MED4) GN=tig PE=3
           SV=1
          Length = 473

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 15  ERELFAVPQ*EIKKKKTERACQISKSPLFCSLSCLPIKSQNGM----LTTWTNES*TIKE 182
           ERE   V   EI +K  E   +ISKSP    +  L    +N +    L TW  E+  +KE
Sbjct: 378 EREKITVDNEEIDQKMKEYEDEISKSPKQIDIQKLKDVVRNDLLQEKLITWLEENSAVKE 437

Query: 183 CN 188
            N
Sbjct: 438 IN 439

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920704|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_D09.
         (503 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01H72|Q01H72_OSTTA PAB-dependent poly(A) ribonuclease, subun...    34   3.4  
tr|B3IUC9|B3IUC9_BOMMO ITG-containing peptide OS=Bombyx mori GN=...    33   5.8  

>tr|Q01H72|Q01H72_OSTTA PAB-dependent poly(A) ribonuclease, subunit
           PAN2 (ISS) OS=Ostreococcus tauri GN=Ot01g00110 PE=4 SV=1
          Length = 1189

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 249 SLPFDLCLTIHAHCYETGHPPVVVVNCNWD 338
           S PFD C T+     E GH P  + +C +D
Sbjct: 32  SFPFDACTTLQTELLEEGHAPPAITSCGFD 61


>tr|B3IUC9|B3IUC9_BOMMO ITG-containing peptide OS=Bombyx mori GN=itg
           PE=2 SV=1
          Length = 213

 Score = 33.5 bits (75), Expect = 5.8
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 2   STCERERAFCCATMRN*KKKDRKSMPNFQEPPLLFSFLLTNKISKWNAH 148
           S CE  R  CC   R  ++K RKS   F+EP +    +  ++I ++  H
Sbjct: 152 SECEITRGLCCIMQRRHRQKSRKSCGYFKEPLVCIGPVAIDQIREYVEH 200