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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920711
Clone id YMU001_000140_E08
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCTTTACTAAACTTTGAGAAATAAAGATTCAGGGTTGATCACAAGAAGTGTTCTTTACAT
TTGTACTGATAGTGCAAAAAAAGACTTACATGCCTTTCCTGGGCACAATTGGATTGGCAA
GCCACAGCATAGATTCAACTATCACTTCATAGGATTCTCTGATGTAAAGATATTACGAAA
GATCATCAAGGGCTCATGCCTCTCCTCCAATCACTGAATGTCATACAATGACAGAGTCCA
CAATAACCCTTTTATATACACTCACAGCAAAAGTGTGACAGCCTCGCTACCTTTTTTACA
ATTCATCGATGAAACTCCCCAGGCGGCAAGCAACCTCAAGCATCCTTTTTTGTTTGCCCA
TGCAAAAATTCTAAAATTGACAAGCGTCGTCGCTCAAGGGATGTATCCTCTTTAGACTTC
CCGGAAAGATTCTCGAGCATCTTTATTGCTTCTTGAAAGCCCTCGCTCGCAGGCCCATCA
TTACCAAGAGCTCTATCTACATCTGCTACTTTAGCAAGTGACACAGCGAGATCCAGCACC
TGGGATGACAACTCTGTATCATCCT
■■Homology search results ■■ -
sp_hit_id Q9WV70
Definition sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus musculus
Align length 101
Score (bit) 30.8
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920711|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_E08.
         (565 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus...    31   4.8  

>sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus
           musculus GN=Noc2l PE=2 SV=2
          Length = 747

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
 Frame = -3

Query: 539 VLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLE-NLSGKSKEDTSLERRRLSILEFL 363
           VL   + + +  D +R  G        F   +K+   NL  K+  D  LE+    ILE+L
Sbjct: 476 VLPFILEIFQQVDFNRRPGRMSSKPINFSVILKLSSTNLQEKAYRDGLLEQLCDLILEYL 535

Query: 362 HGQTKKDA*GCLPPGEFHR*IVKKVARLSHFCCECI*KGYC 240
           H Q    A        F   ++  V +L  F  EC    YC
Sbjct: 536 HSQAHSIA--------FPELVLPTVLQLKSFLRECKVANYC 568
tr_hit_id B4FS59
Definition tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 70
Score (bit) 81.3
E-value 3.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920711|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_E08.
         (565 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea m...    81   3e-14
tr|Q6K8Z1|Q6K8Z1_ORYSJ Os02g0795300 protein OS=Oryza sativa subs...    79   2e-13
tr|Q658D5|Q658D5_ORYSJ cDNA clone:001-006-B04, full insert seque...    79   2e-13
tr|Q0JRF2|Q0JRF2_ORYSJ Os01g0104100 protein (Fragment) OS=Oryza ...    79   2e-13
tr|B8AE50|B8AE50_ORYSI Putative uncharacterized protein OS=Oryza...    79   2e-13
tr|B8ACS7|B8ACS7_ORYSI Putative uncharacterized protein OS=Oryza...    79   2e-13
tr|A3AC90|A3AC90_ORYSJ Putative uncharacterized protein OS=Oryza...    79   2e-13
tr|A2ZNA5|A2ZNA5_ORYSJ Putative uncharacterized protein OS=Oryza...    79   2e-13
tr|A9RJS0|A9RJS0_PHYPA Predicted protein OS=Physcomitrella paten...    77   5e-13
tr|Q9M2V1|Q9M2V1_ARATH RING finger-like protein OS=Arabidopsis t...    77   6e-13
tr|A7QAJ4|A7QAJ4_VITVI Chromosome undetermined scaffold_71, whol...    77   8e-13
tr|A9PIZ1|A9PIZ1_POPJC Putative uncharacterized protein OS=Popul...    75   2e-12
tr|B6SKG7|B6SKG7_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|B1BAG9|B1BAG9_CLOBO Helix-turn-helix domain protein OS=Clostr...    41   0.051
tr|B2VTN7|B2VTN7_PYRTR Phenylacetate 2-hydroxylase OS=Pyrenophor...    34   4.8  
tr|B6NHT9|B6NHT9_BRAFL Putative uncharacterized protein OS=Branc...    33   8.2  
tr|Q8ZZU1|Q8ZZU1_PYRAE Putative uncharacterized protein PAE0081 ...    33   8.2  

>tr|B4FS59|B4FS59_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 379

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+DLA SLAKVADVDR LGN+  A EGF+EAI+ LE L   S E T+LE+RR
Sbjct: 307 EHSAVASQVIDLATSLAKVADVDRNLGNESTAVEGFEEAIRCLEKLKLDS-EQTTLEQRR 365

Query: 383 LSILEFLHGQ 354
           LS+L+FLH Q
Sbjct: 366 LSVLDFLHNQ 375


>tr|Q6K8Z1|Q6K8Z1_ORYSJ Os02g0795300 protein OS=Oryza sativa subsp.
           japonica GN=OJ1695_H09.11 PE=2 SV=1
          Length = 365

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 293 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 351

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 352 LSVLDFLQKQ 361


>tr|Q658D5|Q658D5_ORYSJ cDNA clone:001-006-B04, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0436E04.13 PE=2 SV=1
          Length = 363

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 291 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 349

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 350 LSVLDFLQKQ 359


>tr|Q0JRF2|Q0JRF2_ORYSJ Os01g0104100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0104100 PE=4 SV=1
          Length = 418

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 346 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 404

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 405 LSVLDFLQKQ 414


>tr|B8AE50|B8AE50_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09273 PE=4 SV=1
          Length = 655

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 583 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 641

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 642 LSVLDFLQKQ 651


>tr|B8ACS7|B8ACS7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00037 PE=4 SV=1
          Length = 409

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 337 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 395

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 396 LSVLDFLQKQ 405


>tr|A3AC90|A3AC90_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008412 PE=4 SV=1
          Length = 623

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 551 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 609

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 610 LSVLDFLQKQ 619


>tr|A2ZNA5|A2ZNA5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000027 PE=4 SV=1
          Length = 344

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRR 384
           + + ++SQV+D+A SLAKVADVDR LGN+  A EGF+EAIK LENL  +S E  SLE+RR
Sbjct: 272 EHSAVASQVIDVATSLAKVADVDRNLGNESMAVEGFEEAIKCLENLKLESGE-ASLEQRR 330

Query: 383 LSILEFLHGQ 354
           LS+L+FL  Q
Sbjct: 331 LSVLDFLQKQ 340


>tr|A9RJS0|A9RJS0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_115595 PE=4 SV=1
          Length = 372

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = -3

Query: 563 DDTELSSQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLEN-LSGKSKEDTSLERR 387
           D T L+  VLD+AVSLAKVADVD ALGN+  ASEGFQ+A+K L+N L  K+ +  SLE++
Sbjct: 296 DFTTLAPLVLDVAVSLAKVADVDVALGNESAASEGFQDALKKLQNLLPPKTADAASLEKK 355

Query: 386 RLSILEFLHGQTKKDA 339
           RLS++ FL  Q    A
Sbjct: 356 RLSVMTFLQNQLTDSA 371


>tr|Q9M2V1|Q9M2V1_ARATH RING finger-like protein OS=Arabidopsis
           thaliana GN=T12E18_50 PE=2 SV=1
          Length = 405

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 40/69 (57%), Positives = 56/69 (81%)
 Frame = -3

Query: 545 SQVLDLAVSLAKVADVDRALGNDGPASEGFQEAIKMLENLSGKSKEDTSLERRRLSILEF 366
           SQ+LD+AVSLAKVAD+DR L N+  A++GF+E +++LE+L   S ED++LE+RRLS+LEF
Sbjct: 334 SQILDVAVSLAKVADIDRTLQNEVAATDGFKEGMRLLESLKLDS-EDSALEQRRLSVLEF 392

Query: 365 LHGQTKKDA 339
           L  Q + DA
Sbjct: 393 LKKQVETDA 401