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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920716
Clone id YMU001_000140_F02
Library
Length 252
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTGAATGAATGTTTCATTGGTATCTTGTATATTTAGACGGTTAT
AGGTGAGAGGTACATTTCATCGTATCTAGTGTTTAGGTCTCATAGGCCTCATTGGCCTTT
TAGAGACCTTAATATACACCCGCTTCTCTCCCAGTTCCCTCTGGCATAAGAGGTTCAAAA
CTGTTGGATGGATATTTGAGGTCCTTTGGGACAGTTCCTTAAACACTAAAACTTCTCTTC
TTCTTCTCCCAC
■■Homology search results ■■ -
sp_hit_id Q8R5H1
Definition sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus
Align length 25
Score (bit) 28.9
E-value 8.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920716|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_F02.
         (234 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 O...    29   8.4  
sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 O...    29   8.4  

>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15
           OS=Mus musculus GN=Usp15 PE=2 SV=1
          Length = 981

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 179 KYPSNSFEPL-MPEGTGREAGVY*G 108
           KY SN+FEPL  P+ T ++AG+Y G
Sbjct: 182 KYMSNTFEPLNKPDSTIQDAGLYQG 206


>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15
           OS=Homo sapiens GN=USP15 PE=1 SV=3
          Length = 981

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 179 KYPSNSFEPL-MPEGTGREAGVY*G 108
           KY SN+FEPL  P+ T ++AG+Y G
Sbjct: 182 KYMSNTFEPLNKPDSTIQDAGLYQG 206
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920716|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_F02.
         (234 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******