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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920728
Clone id YMU001_000140_G07
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000140_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGCACATTGCAGCAAACTTAAATTTGAGCATTAAATCTGTGACCTACTTACCTAGTTAT
GGAGAAGGCCAGCTAGACTTCAAAAAAATAAAGCTATACAGCATTTTCCACGCACTTCAC
ATCCTAAGAACCTTATTAAACACTTCATCCAAACATCAGACAAAGTTGCAACATTGTCAA
GAATCCTCCTGACCTATCTTGTGCATTCTTCTACAGACTATCTGTCTTGTTAGCTTAAAG
ACCACCAGAATAGAGAATTAAGTACAAATCCTACTCACCCTCCAAAAAACTCGCACGATG
TTGCCTCTTTGGAAGCAATTCAGGCTGAGATACAGGCTCGAGCTTTTCTAAGATCCTAGG
TTGGAAGCCTTTTACTGAATTTTGTCCTTCATGCAAGGCAGTTGATGTGCTTTGGACATA
TGTACCACCTCTTGAAGTAAGCCCCGCACAACTTTCTGTATCATTATCAGCTACCTTGGT
CACTAAACTAGATGCCTTTTGATTCTTTAGCTCGTTACGAGCTCGAT
■■Homology search results ■■ -
sp_hit_id Q9UT02
Definition sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe
Align length 78
Score (bit) 35.0
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920728|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_G07.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizos...    35   0.22 
sp|P56149|ASPA_HELPY Aspartate ammonia-lyase OS=Helicobacter pyl...    32   2.4  
sp|Q9ZLI5|ASPA_HELPJ Aspartate ammonia-lyase OS=Helicobacter pyl...    32   2.4  
sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fa...    30   5.4  
sp|Q892N6|RL27_CLOTE 50S ribosomal protein L27 OS=Clostridium te...    30   7.1  

>sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71
           OS=Schizosaccharomyces pombe GN=sec71 PE=1 SV=1
          Length = 1811

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 25/78 (32%), Positives = 36/78 (46%)
 Frame = +1

Query: 7   IAANLNLSIKSVTYLPSYGEGQLDFKKIKLYSIFHALHILRTLLNTSSKHQTKLQHCQES 186
           I A   LSIK++ Y   Y       +  KL S+    HILRT +N  S    K++    +
Sbjct: 380 IRALCKLSIKNIPYEHEYDLKSQSMRS-KLMSLHLIYHILRTYMNILSDINVKIRSPTST 438

Query: 187 S*PILCILLQTICLVSLK 240
             P++  + Q ICL   K
Sbjct: 439 PTPLIDAVKQYICLALAK 456


>sp|P56149|ASPA_HELPY Aspartate ammonia-lyase OS=Helicobacter pylori
           GN=aspA PE=3 SV=1
          Length = 468

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 174 LSRILLTYLVHSSTDYLSC*LKDHQNRELSTNPTHP 281
           ++ + L Y+ H   +Y  C   DH NR  STN  +P
Sbjct: 109 IANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYP 144


>sp|Q9ZLI5|ASPA_HELPJ Aspartate ammonia-lyase OS=Helicobacter pylori
           J99 GN=aspA PE=3 SV=1
          Length = 468

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 174 LSRILLTYLVHSSTDYLSC*LKDHQNRELSTNPTHP 281
           ++ + L Y+ H   +Y  C   DH NR  STN  +P
Sbjct: 109 IANLALEYMGHQKGEYQFCHPNDHVNRSQSTNDAYP 144


>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn
            PE=1 SV=3
          Length = 2505

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -3

Query: 480  TKVADNDTESCAGLTSRGGTYV---QSTSTALHEGQNSVKGFQPRILEKLEPVSQPELL 313
            T+VAD  T  C G+T  GG Y+   Q+T+T+  + +  V   +  +     P  +PE L
Sbjct: 1074 TQVADVTTSRCLGVTVSGGVYISRLQTTATSRRQQEQLVPTLEKFV---FTPHVEPECL 1129


>sp|Q892N6|RL27_CLOTE 50S ribosomal protein L27 OS=Clostridium
           tetani GN=rpmA PE=3 SV=1
          Length = 101

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -3

Query: 507 KNQKASSLVTKVADNDTESCAGLTSRGGTYVQSTSTALHEGQNSVKGFQPRILEKLEPVS 328
           ++ +A  L  K AD            G   V+   T +H GQN  +G    +  K++ V 
Sbjct: 22  RDSEAKRLGVKCADGQ------FVLAGSILVRQRGTKIHPGQNVGRGGDDTLFSKVDGVV 75

Query: 327 QPELLPKRQHRAS 289
           + E + K + RAS
Sbjct: 76  RYERVGKNKKRAS 88
tr_hit_id B6BNA4
Definition tr|B6BNA4|B6BNA4_9PROT Putative uncharacterized protein OS=Campylobacterales bacterium GD 1
Align length 80
Score (bit) 34.3
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920728|Adiantum capillus-veneris mRNA, clone:
YMU001_000140_G07.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6BNA4|B6BNA4_9PROT Putative uncharacterized protein OS=Campy...    34   4.0  
tr|B2WIN7|B2WIN7_PYRTR Putative uncharacterized protein OS=Pyren...    34   5.2  
tr|B8AU55|B8AU55_ORYSI Putative uncharacterized protein OS=Oryza...    33   6.7  
tr|B4HH09|B4HH09_DROSE GM26592 OS=Drosophila sechellia GN=GM2659...    33   6.7  
tr|B2B430|B2B430_PODAN Predicted CDS Pa_6_8005 OS=Podospora anse...    33   6.7  
tr|A0AUQ7|A0AUQ7_DANRE Znf143 protein OS=Danio rerio GN=znf143 P...    33   8.8  
tr|A9S236|A9S236_PHYPA Predicted protein OS=Physcomitrella paten...    28   9.5  

>tr|B6BNA4|B6BNA4_9PROT Putative uncharacterized protein
           OS=Campylobacterales bacterium GD 1 GN=CBGD1_2379 PE=4
           SV=1
          Length = 655

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 23/80 (28%), Positives = 39/80 (48%)
 Frame = -3

Query: 516 NELKNQKASSLVTKVADNDTESCAGLTSRGGTYVQSTSTALHEGQNSVKGFQPRILEKLE 337
           N LKN   S+L   V D D ++ A +       V++  T + EG ++       ++EKL+
Sbjct: 314 NILKNVSNSALTQAVPD-DKKAMAQVVKGLENIVETLKTNIKEGDSTTSKAFNTLIEKLQ 372

Query: 336 PVSQPELLPKRQHRASFLEG 277
              QP+LL     + S ++G
Sbjct: 373 HQMQPKLLTPENFKLSSIQG 392


>tr|B2WIN7|B2WIN7_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_09846 PE=4 SV=1
          Length = 684

 Score = 33.9 bits (76), Expect = 5.2
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = -3

Query: 486 LVTKVADNDTESCAGLTSRGGTYVQSTSTALHEGQNSVKGFQPRILEKLEPVSQPELLPK 307
           LV +V  N   S AG++ + GTY +  + AL E +  V+   P IL++LE         +
Sbjct: 621 LVREVVGN--LSVAGMSEKQGTYKKLIAKALGEREEDVESMLPEILQELEEA-------E 671

Query: 306 RQHRASFLEG 277
            Q RA  L+G
Sbjct: 672 TQERAEGLDG 681


>tr|B8AU55|B8AU55_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17380 PE=4 SV=1
          Length = 352

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = -3

Query: 468 DNDTESCAGLTSRGGTYVQSTSTALHEGQNSVKGFQPRILEKLEPVSQPELLPKRQH 298
           D++    A  T +G TY+ S+    H  +N  +GF PR  ++ E   + ++ PKRQH
Sbjct: 267 DSENSGTASATKKG-TYMHSSQEDCHT-ENYCQGFIPRKHQREELAPEEDIDPKRQH 321


>tr|B4HH09|B4HH09_DROSE GM26592 OS=Drosophila sechellia GN=GM26592
           PE=4 SV=1
          Length = 215

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 12/32 (37%), Positives = 25/32 (78%)
 Frame = -3

Query: 381 NSVKGFQPRILEKLEPVSQPELLPKRQHRASF 286
           ++++G+QP+IL+K++P   P  +PKR++  S+
Sbjct: 81  DTIEGWQPKILKKMKPKPMPMSMPKRRYDWSY 112


>tr|B2B430|B2B430_PODAN Predicted CDS Pa_6_8005 OS=Podospora
           anserina PE=4 SV=1
          Length = 463

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -3

Query: 486 LVTKVADNDTESCAGLTSRGGTYVQSTSTALHEGQNSVKGFQPRILEK-LEPVSQPELLP 310
           +VT ++D+D++S  G     G  V+  S  LH   N+ +  Q  +L+   EPVS+P+ +P
Sbjct: 7   IVTLMSDSDSDSEPG----SGPSVEE-SLPLHSTTNTSERVQAAVLQSDSEPVSEPQSIP 61

Query: 309 KRQHRASF 286
             Q R  F
Sbjct: 62  SLQKRLPF 69


>tr|A0AUQ7|A0AUQ7_DANRE Znf143 protein OS=Danio rerio GN=znf143 PE=2
           SV=1
          Length = 623

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
 Frame = +3

Query: 96  IQHFPRTSHPKNLIKH--FIQTSDKVATLSRILLTYLVHSSTDYLSC*LKDHQNREL--- 260
           IQH P+ S  +N I     IQ  D  A      + +L  S T      L+D Q  +L   
Sbjct: 61  IQHSPKVSLTENKIMEGQVIQLEDGSAAY----VQHLPMSKTGGEGLRLEDGQAVQLEDG 116

Query: 261 STNPTHPPKNSHDVASLEAIQAEIQARAFLR 353
           +T  TH PK ++D   L+A+Q E    A+++
Sbjct: 117 TTAYTHAPKETYDQGGLQAVQLEDGTTAYIQ 147


>tr|A9S236|A9S236_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_109731 PE=4 SV=1
          Length = 326

 Score = 28.5 bits (62), Expect(2) = 9.5
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
 Frame = +3

Query: 57  LWRRPARLQKNKAIQHFPRTSHPKNLIKHFIQTSDKV------ATLSRILLTYL 200
           +W      +  K  QHF R +HP+   K  +   DK         ++R +L YL
Sbjct: 171 IWTEAPTPEMTKVSQHFVRGNHPETFAKVVVDCMDKCYSGEADLVVARAILLYL 224



 Score = 23.1 bits (48), Expect(2) = 9.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 268 ILLTLQKTRTMLPLWKQFRLRYRLELF*DPRLEAF 372
           +LLTL+  R  LPL++  +  Y+  L  DP  + +
Sbjct: 262 LLLTLE--RDALPLFRMLKQEYKSSLDRDPSYDEY 294