BP920729 |
Clone id |
YMU001_000140_G08 |
Library |
YMU01 |
Length |
493 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000140_G08. |
Accession |
BP920729 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTACACTTGAAGCCAGAGCTGAGTAAATATATACCATTACTAGACCATACAGGTAC CTGTTATCAAGGTGCCACATCTTAACCATTGCATCACTCTGTACATGTACACTTGAATTA CAACAGCGCTTCGAAGCCTAAGAGTTTCAAGAGCTTGTTTGCATCACACACTTTCATTCC TTCTTCCCTGCACTTGATCCAATCTGTGCATTTAAGATTGCTTTCTCCAACTCCTTGGAA ACATCATCGCCATTGCTCACAGCAGTAAAATTCGATTTGGAATACAAGTCCTCTCTCCTC GGCGAAGCTTTCTTACTCTTTGGACCTTGGACGTTATTGTTGCTACCTTCTCTCCCCATC CAGGAAGGTGATGGTGCCTCCAAACTAGAAGATTTGTGAGGAAGCCTTGGCATTGACGAA CTGTCTTTAGGAATACCATCTGCTACTCCATTTGAAGTCCAATAAGAGCTCTTAGTCTCA ACATGAGATCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P32499 |
Definition |
sp|P32499|NUP2_YEAST Nucleoporin NUP2 OS=Saccharomyces cerevisiae |
Align length |
98 |
Score (bit) |
35.8 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2EVM4 |
Definition |
tr|A2EVM4|A2EVM4_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 |
Align length |
85 |
Score (bit) |
37.0 |
E-value |
0.49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920729|Adiantum capillus-veneris mRNA, clone: YMU001_000140_G08. (493 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2EVM4|A2EVM4_TRIVA Putative uncharacterized protein OS=Trich... 37 0.49 tr|O82974|O82974_BACSP A2-5a orf5; hypothetical protein OS=Bacil... 36 0.84 tr|B5VNM6|B5VNM6_YEAS6 YLR335Wp-like protein OS=Saccharomyces ce... 36 1.1 tr|B3RHK8|B3RHK8_YEAS1 Nucleoporin OS=Saccharomyces cerevisiae (... 36 1.1 tr|A7A1L6|A7A1L6_YEAS7 Nucleoporin OS=Saccharomyces cerevisiae (... 36 1.1 tr|Q5AYQ8|Q5AYQ8_EMENI Putative uncharacterized protein OS=Emeri... 35 1.4 tr|Q3MJK7|Q3MJK7_9ANNE Cement protein 3B variant 3 OS=Phragmatop... 35 1.9 tr|B4NEZ3|B4NEZ3_DROWI GK22814 OS=Drosophila willistoni GN=GK228... 35 2.4 tr|A2EVM7|A2EVM7_TRIVA DNA-directed RNA polymerase, omega subuni... 34 3.2 tr|B2RXP9|B2RXP9_MOUSE D6Ertd527e protein OS=Mus musculus GN=D6E... 34 4.2 tr|A8STM0|A8STM0_9FIRM Putative uncharacterized protein OS=Copro... 34 4.2 tr|Q0TZ89|Q0TZ89_PHANO Putative uncharacterized protein OS=Phaeo... 34 4.2 tr|B8M0Y7|B8M0Y7_9EURO DDHD domain protein OS=Talaromyces stipit... 34 4.2 tr|B6K9R1|B6K9R1_TOXGO FF domain-containing protein OS=Toxoplasm... 33 5.5 tr|B3MBK1|B3MBK1_DROAN GF11577 OS=Drosophila ananassae GN=GF1157... 33 5.5 tr|A2HJM9|A2HJM9_TRIVA Putative uncharacterized protein OS=Trich... 33 5.5 tr|B8PKH6|B8PKH6_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.5 tr|B4U5K7|B4U5K7_HYDS0 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, ... 33 7.1 tr|Q2PHU5|Q2PHU5_LUTCR Dentin matrix protein 1 (Fragment) OS=Lut... 33 7.1 tr|A2E667|A2E667_TRIVA Extensin-like region family protein (Frag... 33 7.1 tr|Q5KHV3|Q5KHV3_CRYNE Guanine nucleotide exchange factor, putat... 33 7.1 tr|Q5KHV2|Q5KHV2_CRYNE Guanine nucleotide exchange factor, putat... 33 7.1 tr|B6HVT5|B6HVT5_PENCH Pc22g23480 protein OS=Penicillium chrysog... 33 7.1 tr|Q1E3X6|Q1E3X6_COCIM Putative uncharacterized protein OS=Cocci... 33 7.3 tr|Q1JSU7|Q1JSU7_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.3
>tr|A2EVM4|A2EVM4_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_193730 PE=4 SV=1 Length = 695
Score = 37.0 bits (84), Expect = 0.49 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Frame = -3
Query: 428 KDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKASPRREDLYSKSN-FTAVSN 252 K+ S+P + KSSS+E + N+ + KK S ++ L SK N ++ Sbjct: 352 KELESIPTVEDKSSSVEEEINNINSHINEKNSKNAEQEKKNSELQQQLESKKNELESIPT 411
Query: 251 GDDVSKELEKAI--LNAQIGSSAGK 183 +D S ELE + +N+QI S K Sbjct: 412 VEDKSSELENELKSINSQINSKLSK 436
>tr|O82974|O82974_BACSP A2-5a orf5; hypothetical protein OS=Bacillus sp. PE=4 SV=1 Length = 375
Score = 36.2 bits (82), Expect = 0.84 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Frame = -3
Query: 428 KDSSSMPRLPHKSSSLEAPSPSW---MGREGSNNNVQGPKSKKASPRREDLYSKSNFTAV 258 + S + R+PH S S +P S MG GS N + P +P R ++ K+N Sbjct: 35 RTSDNQNRIPHSSGSSHSPIASVNQPMGNSGSQRNSRAPYQ---TPNRNEISKKTNRIPK 91
Query: 257 SNGDDVSKELEKAILNAQIG 198 N D + + + + + N IG Sbjct: 92 ENIDAIFQHINELLDNEWIG 111
>tr|B5VNM6|B5VNM6_YEAS6 YLR335Wp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AWRI1631_123630 PE=4 SV=1 Length = 720
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Frame = -3
Query: 437 GIPKDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKA----------SPRRED 288 G+P S + P S PS +E NNNV+ P SK A + Sbjct: 372 GVPNSSKNETSKPVFSFGAATPSAKEASQEDDNNNVEKPSSKPAFNFISNAGTEKEKESK 431
Query: 287 LYSKSNFT-AVSNGDDVSKELEKAILNAQIGSSAGKKE 177 SK F+ +SNG + SK+ +K L + + KKE Sbjct: 432 KDSKPAFSFGISNGSE-SKDSDKPSLPSAVDGENDKKE 468
>tr|B3RHK8|B3RHK8_YEAS1 Nucleoporin OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_04280 PE=4 SV=1 Length = 720
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Frame = -3
Query: 437 GIPKDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKA----------SPRRED 288 G+P S + P S PS +E NNNV+ P SK A + Sbjct: 372 GVPNSSKNETSKPVFSFGAATPSAKEASQEDDNNNVEKPSSKPAFNFISNAGTEKEKESK 431
Query: 287 LYSKSNFT-AVSNGDDVSKELEKAILNAQIGSSAGKKE 177 SK F+ +SNG + SK+ +K L + + KKE Sbjct: 432 KDSKPAFSFGISNGSE-SKDSDKPSLPSAVDGENDKKE 468
>tr|A7A1L6|A7A1L6_YEAS7 Nucleoporin OS=Saccharomyces cerevisiae (strain YJM789) GN=NUP2 PE=4 SV=1 Length = 720
Score = 35.8 bits (81), Expect = 1.1 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Frame = -3
Query: 437 GIPKDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKA----------SPRRED 288 G+P S + P S PS +E NNNV+ P SK A + Sbjct: 372 GVPNSSKNETSKPVFSFGAATPSAKEASQEDDNNNVEKPSSKPAFNFISNAGTEKEKESK 431
Query: 287 LYSKSNFT-AVSNGDDVSKELEKAILNAQIGSSAGKKE 177 SK F+ +SNG + SK+ +K L + + KKE Sbjct: 432 KDSKPAFSFGISNGSE-SKDSDKPSLPSAVDGENDKKE 468
>tr|Q5AYQ8|Q5AYQ8_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN6572.2 PE=4 SV=1 Length = 767
Score = 35.4 bits (80), Expect = 1.4 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Frame = -3
Query: 440 DGIPKDSSSMPRLPHKSS-------SLEAPSPSWMGREGSNNNVQGPKSKKASPRREDLY 282 DG P SS+ P +SS +E PS + +NN G KASP++E+ Y Sbjct: 67 DGSPSQSSTTSARPSESSPSTQKDQDIEPKIPSSVTGASTNN---GGGQLKASPQQEEFY 123
Query: 281 SKSNFTAVSNGDDVSKELEKAILNAQIG 198 S A E+ KA + Q+G Sbjct: 124 QPSREPAAEPAGTPRVEVPKATSDTQVG 151
>tr|Q3MJK7|Q3MJK7_9ANNE Cement protein 3B variant 3 OS=Phragmatopoma californica PE=2 SV=1 Length = 343
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/124 (22%), Positives = 51/124 (41%) Frame = -3
Query: 461 WTSNGVADGIPKDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKASPRREDLY 282 ++S+G + SSS SSS + S S+ G S+++ S +S Sbjct: 28 YSSSGYSSSSSSSSSSSSSYSSSSSSYSSSSSSYSGSSSSSSSYSSSSSSSSSYSSSSSS 87
Query: 281 SKSNFTAVSNGDDVSKELEKAILNAQIGSSAGKKE*KCVMQTSS*NS*ASKRCCNSSVHV 102 S S++++ S+ S + ++ SS C +SS +S +S +SS Sbjct: 88 SSSSYSSSSSSYSSSSSSSYSSSSSSSSSSYSSSSSGCSSSSSSSSSYSSSSSSSSSYSS 147
Query: 101 QSDA 90 S + Sbjct: 148 SSSS 151
>tr|B4NEZ3|B4NEZ3_DROWI GK22814 OS=Drosophila willistoni GN=GK22814 PE=4 SV=1 Length = 763
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = -3
Query: 395 KSSSLEAPSPSWMGREGSNNNVQGPKSKKASPRREDLYSKSNFTAVSNGDDVSKELEKAI 216 + L+A S S GSNNN+ G KSK+ + R++L +++N N D+++ + K Sbjct: 200 QQQQLQADSSS----SGSNNNIIGSKSKRLNNSRDNLNNRNN-----NNDNINNDNNKPT 250
Query: 215 LN 210 +N Sbjct: 251 VN 252
>tr|A2EVM7|A2EVM7_TRIVA DNA-directed RNA polymerase, omega subunit family protein OS=Trichomonas vaginalis G3 GN=TVAG_193760 PE=4 SV=1 Length = 5185
Score = 34.3 bits (77), Expect = 3.2 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -3
Query: 416 SMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKASPRREDLYSKSN-FTAVSNGDDV 240 S+P + KSS LE + N+ + KK S ++ L SK N ++ +D Sbjct: 4899 SIPTVEDKSSELENEINNINSHINEKNSKNAEQEKKNSELQQQLESKKNELESIPTVEDK 4958
Query: 239 SKELEKAI--LNAQIGSSAGK 183 S ELE + +N+QI S K Sbjct: 4959 SSELENELKSINSQINSKLSK 4979
>tr|B2RXP9|B2RXP9_MOUSE D6Ertd527e protein OS=Mus musculus GN=D6Ertd527e PE=2 SV=1 Length = 462
Score = 33.9 bits (76), Expect = 4.2 Identities = 37/129 (28%), Positives = 49/129 (37%) Frame = -3
Query: 476 TKSSYWTSNGVADGIPKDSSSMPRLPHKSSSLEAPSPSWMGREGSNNNVQGPKSKKASPR 297 T SS SN DSSS P H SSS + S S S N GP+ K Sbjct: 331 TSSSNSQSNSSPRSSNTDSSSSPGNSHTSSSSSSSSSSSSSSSSSRGN-SGPRPSKTG-- 387
Query: 296 REDLYSKSNFTAVSNGDDVSKELEKAILNAQIGSSAGKKE*KCVMQTSS*NS*ASKRCCN 117 + S+SN S+ D S + SS+ ++S +S S C+ Sbjct: 388 --SISSQSNSGPRSSNTDSSSSSSPGNIKTSSSSSS----------SNSSSSSHSSYSCS 435
Query: 116 SSVHVQSDA 90 SS H S + Sbjct: 436 SSSHSSSSS 444
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