BP920745 [AcEST]

BP920745
Clone id	YMU001_000141_A02
Library	YMU01
Length	391
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000141_A02.
Accession	BP920745
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GCAGGTACTCCTGGAAGAATTCGCGGACCACAGTCACATGGCCTGCATGGATAATGATTT CTTCATTTCTAAATTCTAGAATTCCTCCCCCCTCCTCCCCCATATAAAGAGGGGTCACCA TCACACTAAAAACACACACCATCACCAAAGAGTACACTATGCACTGTGTGTGCCTAGTGC ACACACACACACACACACACACACACACACACACCATCACCATCACCGAAATCACCATGC TCATCTTGAGCATGACCTCTACACCCTTGGGCTATGGAAGATGAAGGGAAACTAAATGAA GGATGATGGCCATAACCCTCGTGCGAGTCTTCACCATCAACTCCCACCTATCCTCCATGT GCTCTACCACTCTCTCCCTTCTAATTCCCCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6FIW0
Definition	sp\|Q6FIW0\|ATG27_CANGA Autophagy-related protein 27 OS=Candida glabrata
Align length	54
Score (bit)	28.1
E-value	2.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920745\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_A02. (391 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6FIW0\|ATG27_CANGA Autophagy-related protein 27 OS=Candida gl... 28 2.1 >sp\|Q6FIW0\|ATG27_CANGA Autophagy-related protein 27 OS=Candida glabrata GN=ATG27 PE=3 SV=1 Length = 276 Score = 28.1 bits (61), Expect(2) = 2.1 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = -1 Query: 169 TQCIVYSLVMVCVFSVMVTPLYMGEEGGGILEFRNEEIIIHAGHVTVVREFFQE 8 T VY+++ ++ ++V+ Y+ +GG +FRNE + +T + F +E Sbjct: 204 TWLFVYAILFTVIYLMVVS--YLNTKGGSFQDFRNEFVERGTEFITSLPTFVKE 255 Score = 21.6 bits (44), Expect(2) = 2.1 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -3 Query: 266 GCRGHAQDEHGDFGDGDG 213 GC+ + GD G+G+G Sbjct: 163 GCKRDGNSDSGDNGNGNG 180
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A4ZW76
Definition	tr\|A4ZW76\|A4ZW76_CIOIN Transmembrane protein Vc569 (Fragment) OS=Ciona intestinalis
Align length	59
Score (bit)	35.4
E-value	1.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920745\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_A02. (391 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A4ZW76\|A4ZW76_CIOIN Transmembrane protein Vc569 (Fragment) OS... 35 1.4 tr\|A4ZW72\|A4ZW72_CIOIN Transmembrane protein Vc569 (Fragment) OS... 35 1.4 >tr\|A4ZW76\|A4ZW76_CIOIN Transmembrane protein Vc569 (Fragment) OS=Ciona intestinalis PE=2 SV=1 Length = 572 Score = 35.4 bits (80), Expect = 1.4 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -3 Query: 389 GNKGESGRAHGGVGVDGEDSHEGYGXXXXXXXXXXSIAQGCRGHAQDEHGDFGDGDG 213 GN GE G G DGED H G G G G+ +E G G+GDG Sbjct: 273 GNGDGEDGHNGNG----DGEDGHNGNGDEEDGHNGNGDEEDGHNGNGDEEDGHNGNGDG 327 >tr\|A4ZW72\|A4ZW72_CIOIN Transmembrane protein Vc569 (Fragment) OS=Ciona intestinalis PE=2 SV=1 Length = 572 Score = 35.4 bits (80), Expect = 1.4 Identities = 21/59 (35%), Positives = 24/59 (40%) Frame = -3 Query: 389 GNKGESGRAHGGVGVDGEDSHEGYGXXXXXXXXXXSIAQGCRGHAQDEHGDFGDGDG 213 GN GE G G DGED H G G G G+ +E G G+GDG Sbjct: 273 GNGDGEDGHNGNG----DGEDGHNGNGDEEDGHNGNGDEEDGHNGNGDEEDGHNGNGDG 327