BP920747 [AcEST]

BP920747
Clone id	YMU001_000141_A04
Library	YMU01
Length	538
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000141_A04.
Accession	BP920747
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CAGCCAAACACTGGGCGGAGTCTCAGCTAGATGGATCTTTACTTTAGAAGAGAAACATAG AATAACCAAAAACGGGTTTAGTTTCACTAAGCTAAGTCCCTTATAGGCAAAGTATCTTTT AAGGCTAAGGGGAGCAGACTCCGACCCCTGACCATCGCCCCATTACAAGACAGGGTCATA TTGGGAACTATGGAAGTAGCCTCAGAAGCTACATATGAATCCATCTTCTGTAACTAGTTA TACAAGACAGATTTCAAACATAAATATTATACAACAAAATATTTGCACCATTACTATTAA GTAAGGGCAGGCAGCCGCTACGTGGGCCGGCTGGCTGTTAAGGGTTGCCTAATCTACATT ACTATACTAATGTATAAACTGATGGGAATTAAAAGGAATTGGCTATCTCATTATTGAGCT CATTTGGACCAGACAGAGAGCCCGTAGCGTTACTTGGAATCCTAAAATCAATCCAAAGAC AGCTTTTTTTGGCTAGGCTGGGCGTATTATAGGCCAAAGTTTATCTTCTACCTGCAGG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q47688
Definition	sp\|Q47688\|YKFC_ECOLI Putative uncharacterized protein ykfC OS=Escherichia coli (strain K12)
Align length	40
Score (bit)	29.6
E-value	9.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920747\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_A04. (538 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q47688\|YKFC_ECOLI Putative uncharacterized protein ykfC OS=Es... 30 9.8 >sp\|Q47688\|YKFC_ECOLI Putative uncharacterized protein ykfC OS=Escherichia coli (strain K12) GN=ykfC PE=5 SV=2 Length = 376 Score = 29.6 bits (65), Expect = 9.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 109 KVSFKAKGSRLRPLTIAPLQDRVILGTMEVASEATYESIF 228 +V +LRPL I L+DR++ M +A E +ES F Sbjct: 83 RVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDF 122
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q89TK6
Definition	tr\|Q89TK6\|Q89TK6_BRAJA Blr1915 protein OS=Bradyrhizobium japonicum
Align length	41
Score (bit)	33.9
E-value	5.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920747\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_A04. (538 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q89TK6\|Q89TK6_BRAJA Blr1915 protein OS=Bradyrhizobium japonic... 34 5.6 tr\|Q9AN84\|Q9AN84_BRAJA ID459 OS=Bradyrhizobium japonicum GN=id45... 34 5.6 >tr\|Q89TK6\|Q89TK6_BRAJA Blr1915 protein OS=Bradyrhizobium japonicum GN=blr1915 PE=4 SV=1 Length = 491 Score = 33.9 bits (76), Expect = 5.6 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 121 KAKGSRLRPLTIAPLQDRVILGTMEVASEATYESIFCNLY 243 KA G + RPL IA L+D+++ G + A YE FC Y Sbjct: 138 KADGKQ-RPLAIAALEDKIVQGATVIVLNAIYEGDFCGFSY 177 >tr\|Q9AN84\|Q9AN84_BRAJA ID459 OS=Bradyrhizobium japonicum GN=id459 PE=4 SV=1 Length = 491 Score = 33.9 bits (76), Expect = 5.6 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 121 KAKGSRLRPLTIAPLQDRVILGTMEVASEATYESIFCNLY 243 KA G + RPL IA L+D+++ G + A YE FC Y Sbjct: 138 KADGKQ-RPLAIAALEDKIVQGATVIVLNAIYEGDFCGFSY 177