BP920753
Clone id YMU001_000141_A11
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000141_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCCGCATAGGTTGGTTCCCATCCTTATGACGGAGTTCACGATCTCCTTCAGACATGCA
ACTTGCCCTATGCATTCCTCATTAGTACAAAATCCTACTTGGCCGGGATTGAAGAAGTTC
CTCTTTTCAAGTATCTTAGTGAGGATTTTTATGGCAACGGAGATTAACGCGATCCCGGTG
GATAGTTATCAGTGTTGGTCAAATCGCCCTTCTTGGGGATTGACACAATCATTGCGTCGC
TAGCGCCGGCCGGGATGTCTCCGGTGTCATAAATACCCTCAATCATGTACAAGTATGCCT
TGCCCATCTTCGATCATGGCTTACGCGGAACTGATCTAAGCCCCTTATCCTTCACAAGCA
GCTTAAAGAATTCGGGTGGTGAACCATCGCCACCCGCTGCCTTGTGCCTCTTCAATCGCC
GACAGGCCTCCCCTACTTCATACCAGTCCAACGGTCACATACCTCAAGCATACCAGGCCA
GATGCGCACGTATTTGTCATACCAAGCAAGCGGATCCTTGCTAGTACCGTCGCAAATAC
■■Homology search results ■■ -
sp_hit_id P14381
Definition sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis
Align length 85
Score (bit) 33.9
E-value 0.48
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920753|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_A11.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot... 34 0.48
sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing pr... 31 3.2
sp|P07149|FAS1_YEAST Fatty acid synthase subunit beta OS=Sacchar... 31 3.2
sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mu... 31 4.1
sp|P34731|FAS1_CANAL Fatty acid synthase subunit beta OS=Candida... 30 5.4
sp|O14559|TCGAP_HUMAN TC10/CDC42 GTPase-activating protein OS=Ho... 30 7.1
sp|Q24459|PCL_DROME Polycomb protein Pcl OS=Drosophila melanogas... 30 7.1
sp|Q9GLY5|ITIH3_RABIT Inter-alpha-trypsin inhibitor heavy chain ... 30 9.2
sp|Q5KFV4|BTN1_CRYNE Protein BTN1 OS=Cryptococcus neoformans GN=... 30 9.2
sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schi... 30 9.2

>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
OS=Xenopus laevis PE=4 SV=1
Length = 1308

Score = 33.9 bits (76), Expect = 0.48
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = -2

Query: 440 PLDWYEVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEG 261
P+ E+ +A R + +K+ G DG EFF+ +G + ++
Sbjct: 448 PITLDELSQALRLMPHNKSPGLDGLTIEFFQFFW-------------DTLGPDFHRVLTE 494

Query: 260 IYDTGDIPAGASDAMIVSIPKKGDL 186
+ G++P A++ +PKKGDL
Sbjct: 495 AFKKGELPLSCRRAVLSLLPKKGDL 519


>sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing
protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1
Length = 580

Score = 31.2 bits (69), Expect = 3.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Frame = +1

Query: 331 LSFTSSLKNSGGEPSPPAALCLFNRRQASPTSYQSN--------GHIPQAYQAR 468
LS ++S G +PSPP AL L N + N GH+P AY AR
Sbjct: 464 LSTSTSGPRPGCQPSPPRALKLNNLDSQGVRGHSRNSHNGALAPGHVPAAYPAR 517


>sp|P07149|FAS1_YEAST Fatty acid synthase subunit beta
OS=Saccharomyces cerevisiae GN=FAS1 PE=1 SV=2
Length = 2051

Score = 31.2 bits (69), Expect = 3.2
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1

Query: 316 TDLSPLSFTSSLKNSGGEPSPPAALCLFNRRQASPTSYQSNGHIPQAYQARCARI 480
T L P SL+N+ G PSP ++ + Q ++N H+P Q + +
Sbjct: 317 TSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV 371


>sp|Q80YF9|TCGAP_MOUSE TC10/CDC42 GTPase-activating protein OS=Mus
musculus GN=Snx26 PE=1 SV=1
Length = 1305

Score = 30.8 bits (68), Expect = 4.1
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +1

Query: 304 GLRGTDLSPLSFTSSLKNSG-----GEPSPPAALCLFNRRQASPTSYQSNG 441
GLRG D PL+F S G P+PPA+ F R A+P + +G
Sbjct: 756 GLRGLDFDPLTFRCSSPTPGDPAPPASPAPPASASAFPPR-ATPQALSPHG 805


>sp|P34731|FAS1_CANAL Fatty acid synthase subunit beta OS=Candida
albicans GN=FAS1 PE=3 SV=1
Length = 2037

Score = 30.4 bits (67), Expect = 5.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1

Query: 316 TDLSPLSFTSSLKNSGGEPSPPAALCLFNRRQASPTSYQSNGHIPQ 453
T L P SL N G PSP ++ + +Q Q+N H+P+
Sbjct: 304 TSLPPTMLQDSLDNGEGRPSPMLSVRDLSIKQVEKFIEQTNSHLPR 349


>sp|O14559|TCGAP_HUMAN TC10/CDC42 GTPase-activating protein OS=Homo
sapiens GN=SNX26 PE=1 SV=2
Length = 1287

Score = 30.0 bits (66), Expect = 7.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1

Query: 304 GLRGTDLSPLSFTSSLKNSGGEPSPPAA 387
GLRG D PL+F S + G+P+PPA+
Sbjct: 734 GLRGLDFDPLTFRCS-SPTPGDPAPPAS 760


>sp|Q24459|PCL_DROME Polycomb protein Pcl OS=Drosophila melanogaster
GN=Pcl PE=1 SV=2
Length = 1043

Score = 30.0 bits (66), Expect = 7.1
Identities = 21/95 (22%), Positives = 42/95 (44%)
Frame = +1

Query: 172 LSVLVKSPFLGIDTIIASLAPAGMSPVS*IPSIMYKYALPIFDHGLRGTDLSPLSFTSSL 351
+++ + + + T ++S P IP+I +K LP+ D + S SS
Sbjct: 194 INICINNHYTETPTSLSSSLTTAQQPSPIIPAIQHKAILPLIDSSTADSSSCSSSSVSSS 253

Query: 352 KNSGGEPSPPAALCLFNRRQASPTSYQSNGHIPQA 456
S G + AA+ + + ++ T+ Q+ P+A
Sbjct: 254 SYS-GTATTSAAVVIVDEPDSTTTTPQTPPTTPEA 287


>sp|Q9GLY5|ITIH3_RABIT Inter-alpha-trypsin inhibitor heavy chain H3
OS=Oryctolagus cuniculus GN=ITIH3 PE=2 SV=1
Length = 903

Score = 29.6 bits (65), Expect = 9.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1

Query: 268 IMYKYALPIFDHGLRGTDLSPLSFTSSLKNSGGEPSPPAALCLFNRRQASPT 423
++ + + + HGL G P F S + G EP+ P A + RQ + T
Sbjct: 809 VVDSHRMSAWTHGLLGQFFHPFDFKVSDVHPGSEPTKPDATMVVKNRQLTVT 860


>sp|Q5KFV4|BTN1_CRYNE Protein BTN1 OS=Cryptococcus neoformans
GN=BTN1 PE=3 SV=1
Length = 516

Score = 29.6 bits (65), Expect = 9.2
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1

Query: 268 IMYKYALPIFDHGLRGTDLSP---LSFTSSLKNSGGEPSPPAAL 390
I YKY LP F H +D SP L +SSL N+ PPA L
Sbjct: 188 ITYKYILPPFSHLEASSDSSPYQRLPMSSSLSNNNNF-RPPAIL 230


>sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1
OS=Schizosaccharomyces pombe GN=btb1 PE=1 SV=1
Length = 1347

Score = 29.6 bits (65), Expect = 9.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1

Query: 238 GMSPVS*IPSIMYKYALPIFDHGLRGTDLSPLSFTSSLKNS-----GGEPSPPAALCLFN 402
G+SP + ++ P+ D + G +L F +++ N+ G EPS P + L
Sbjct: 123 GLSPFQFLSRVLSSTIHPVLDLPIIGNEL--YGFGTNVNNTLGIANGKEPSSPERVFLLK 180

Query: 403 RRQASPTSYQ 432
+ SPTS Q
Sbjct: 181 NQTESPTSGQ 190


tr_hit_id Q4QQE8
Definition tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Schistosoma mansoni
Align length 85
Score (bit) 42.0
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920753|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_A11.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Sch... 42 1e-04
tr|A8PIF8|A8PIF8_COPC7 Putative uncharacterized protein OS=Copri... 45 0.003
tr|Q5DEY9|Q5DEY9_SCHJA SJCHGC02887 protein OS=Schistosoma japoni... 37 0.004
tr|Q5C3A7|Q5C3A7_SCHJA SJCHGC06937 protein (Fragment) OS=Schisto... 42 0.024
tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment) OS=Schisto... 40 0.054
tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 39 0.16
tr|Q30KX0|Q30KX0_SCHMA Reverse transcriptase SR3-left (Fragment)... 30 0.16
tr|Q76IM4|Q76IM4_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2... 37 0.60
tr|Q3KZB5|Q3KZB5_SCHJA SJCHGC09460 protein (Fragment) OS=Schisto... 37 0.60
tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment... 28 0.98
tr|B0E2M1|B0E2M1_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.8
tr|A7TGD3|A7TGD3_VANPO Putative uncharacterized protein OS=Vande... 35 3.0
tr|A3B6L1|A3B6L1_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.9
tr|B5LIN4|B5LIN4_TETTH Rnf2p OS=Tetrahymena thermophila GN=RNF2 ... 34 3.9
tr|B8JA34|B8JA34_9DELT Beta-lactamase OS=Anaeromyxobacter dehalo... 33 6.6
tr|O82276|O82276_ARATH Putative non-LTR retroelement reverse tra... 33 8.6

>tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase
OS=Schistosoma mansoni PE=2 SV=1
Length = 992

Score = 42.0 bits (97), Expect(2) = 1e-04
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
E+ A R++K KAAG D P E K V + K + I+D
Sbjct: 491 EISMAIRQIKSGKAAGPDNIPAEALKANV-------------AATAKILHILFSKIWDEE 537

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
+P +++ IPKKGDL+ DN
Sbjct: 538 QVPKDWKKGLLIKIPKKGDLSKCDN 562



Score = 26.6 bits (57), Expect(2) = 1e-04
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = -1

Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13
GI L+S+ K+ ++L R Q GF + C Q+A L+ IV I
Sbjct: 565 GITLLSIPGKVFNRVLLNRMKDSVDAQLRDQQAGFRKDRSCTDQIATLRIIVEQSI 620


>tr|A8PIF8|A8PIF8_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_13309 PE=4 SV=1
Length = 872

Score = 44.7 bits (104), Expect = 0.003
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Frame = -2

Query: 437 LDWYEVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRK---------------- 306
L+W EV A RR+ R+ A G DG K LV ++ + V R+
Sbjct: 626 LEWREVLLAIRRMNRNTAPGKDGIHVNVLKSLVSEECMEEVKRQNPAFKRPEKVQINLPE 685

Query: 305 ------P*SKMGKAYLYMIEGIYDTGDIPAGASDAMIVSIPKKGD 189
P + MGKA+ ++ ++D+G +P ++ I ++ K GD
Sbjct: 686 YELPITPMTPMGKAFFVLLNRVWDSGALPDTWNEVWICNLLKPGD 730


>tr|Q5DEY9|Q5DEY9_SCHJA SJCHGC02887 protein OS=Schistosoma japonicum
PE=2 SV=1
Length = 187

Score = 36.6 bits (83), Expect(2) = 0.004
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
E+ A R++K KAAG D P E K + + + + I++
Sbjct: 3 EIKIAIRQIKSGKAAGPDNIPAEALKSDI-------------DITARMLHVLFKRIWEEE 49

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
+PA + ++ IPKKGDL+ +N
Sbjct: 50 QVPADWKEGYLIKIPKKGDLSKCEN 74



Score = 26.9 bits (58), Expect(2) = 0.004
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = -1

Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13
GI L+SV K+ ++L R Q GF + C Q+A L+ IV I
Sbjct: 77 GITLLSVPGKVFNRVLLNRMKDSVDAQLRDQQAGFRKDRSCTDQIATLRIIVEQSI 132


>tr|Q5C3A7|Q5C3A7_SCHJA SJCHGC06937 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 244

Score = 41.6 bits (96), Expect = 0.024
Identities = 31/90 (34%), Positives = 43/90 (47%)
Frame = -2

Query: 440 PLDWYEVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEG 261
P YEV +A LKR +AAG D PE F KD G + ++
Sbjct: 81 PPSLYEVEKAIGNLKRGRAAGPDRLTPEVF----KDGG---------PVLAARLTEILSR 127

Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171
I++ G IP+ S ++IV I KKG ++ DN
Sbjct: 128 IWELGVIPSDWSQSLIVPIYKKGQKSSCDN 157


>tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 513

Score = 40.4 bits (93), Expect = 0.054
Identities = 29/85 (34%), Positives = 42/85 (49%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
EV +A +LKR +AAG DG PE F KD G + ++ ++D
Sbjct: 228 EVQKAISKLKRGRAAGSDGLTPEVF----KDGG---------PVLAIRLTSILAKVWDLD 274

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
IP+ S ++IV I KKG ++ DN
Sbjct: 275 KIPSDWSKSLIVPIYKKGPKSSCDN 299


>tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4
SV=1
Length = 1329

Score = 38.9 bits (89), Expect = 0.16
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
E+ +A + ++ +K G DG P EF+K K+ GL L +I G
Sbjct: 488 ELQKALQSMECNKVPGIDGLPAEFYKTFWKEVGLD-------------LLQVINESLAYG 534

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
+P A++ +PKKGDL + N
Sbjct: 535 QLPLSCRRAVLTLLPKKGDLNDIKN 559


>tr|Q30KX0|Q30KX0_SCHMA Reverse transcriptase SR3-left (Fragment)
OS=Schistosoma mansoni PE=4 SV=1
Length = 271

Score = 29.6 bits (65), Expect(2) = 0.16
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -1

Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13
GI+L+SV K+ ++L R Q GF + C GQ+A L+ IV +
Sbjct: 34 GISLLSVPGKVFNRVLLNRMKDAVDAELRDQQAGFRKDRSCTGQIATLRIIVEQSV 89



Score = 28.1 bits (61), Expect(2) = 0.16
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2

Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171
I++ +P + ++ IPKKGDL+ +N
Sbjct: 2 IWEEEQVPMDWKEGYLIKIPKKGDLSKCEN 31


>tr|Q76IM4|Q76IM4_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2
PE=4 SV=1
Length = 1246

Score = 37.0 bits (84), Expect = 0.60
Identities = 28/85 (32%), Positives = 37/85 (43%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
E+ A L KA G DG P EF+K S +GK L + + TG
Sbjct: 421 ELYVALMSLANGKAPGIDGIPVEFYKAFW-------------SVVGKDMLEVFLESWRTG 467

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
+P A+I +PKKGDL + N
Sbjct: 468 LLPRSCRRAIITLLPKKGDLQDLKN 492


>tr|Q3KZB5|Q3KZB5_SCHJA SJCHGC09460 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=1
Length = 134

Score = 37.0 bits (84), Expect = 0.60
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = -2

Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246
EV A LKR +AAG DG P+ F KD G R ++ I++
Sbjct: 34 EVANAIGNLKRGRAAGSDGLTPKIF----KDGGPAVAAR---------LTEILARIWELD 80

Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171
IP+ S +IV I KKG ++ DN
Sbjct: 81 VIPSDWSRTLIVPIFKKGQKSSCDN 105


>tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment)
OS=Schistosoma mansoni PE=4 SV=1
Length = 271

Score = 28.1 bits (61), Expect(2) = 0.98
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2

Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171
I++ +P + ++ IPKKGDL+ +N
Sbjct: 2 IWEEEQVPMDWKEGYLIKIPKKGDLSKCEN 31



Score = 26.9 bits (58), Expect(2) = 0.98
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1

Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13
GI+L+SV K+ ++L R Q GF + C Q+A L+ IV +
Sbjct: 34 GISLLSVPGKVFNRVLLNRMKDTIDAELRDQQAGFRRDRSCTDQIATLRIIVEQSV 89