BP920753 |
Clone id |
YMU001_000141_A11 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000141_A11. |
Accession |
BP920753 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGGCCGCATAGGTTGGTTCCCATCCTTATGACGGAGTTCACGATCTCCTTCAGACATGCA ACTTGCCCTATGCATTCCTCATTAGTACAAAATCCTACTTGGCCGGGATTGAAGAAGTTC CTCTTTTCAAGTATCTTAGTGAGGATTTTTATGGCAACGGAGATTAACGCGATCCCGGTG GATAGTTATCAGTGTTGGTCAAATCGCCCTTCTTGGGGATTGACACAATCATTGCGTCGC TAGCGCCGGCCGGGATGTCTCCGGTGTCATAAATACCCTCAATCATGTACAAGTATGCCT TGCCCATCTTCGATCATGGCTTACGCGGAACTGATCTAAGCCCCTTATCCTTCACAAGCA GCTTAAAGAATTCGGGTGGTGAACCATCGCCACCCGCTGCCTTGTGCCTCTTCAATCGCC GACAGGCCTCCCCTACTTCATACCAGTCCAACGGTCACATACCTCAAGCATACCAGGCCA GATGCGCACGTATTTGTCATACCAAGCAAGCGGATCCTTGCTAGTACCGTCGCAAATAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14381 |
Definition |
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis |
Align length |
85 |
Score (bit) |
33.9 |
E-value |
0.48 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4QQE8 |
Definition |
tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Schistosoma mansoni |
Align length |
85 |
Score (bit) |
42.0 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920753|Adiantum capillus-veneris mRNA, clone: YMU001_000141_A11. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Sch... 42 1e-04 tr|A8PIF8|A8PIF8_COPC7 Putative uncharacterized protein OS=Copri... 45 0.003 tr|Q5DEY9|Q5DEY9_SCHJA SJCHGC02887 protein OS=Schistosoma japoni... 37 0.004 tr|Q5C3A7|Q5C3A7_SCHJA SJCHGC06937 protein (Fragment) OS=Schisto... 42 0.024 tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment) OS=Schisto... 40 0.054 tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 39 0.16 tr|Q30KX0|Q30KX0_SCHMA Reverse transcriptase SR3-left (Fragment)... 30 0.16 tr|Q76IM4|Q76IM4_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2... 37 0.60 tr|Q3KZB5|Q3KZB5_SCHJA SJCHGC09460 protein (Fragment) OS=Schisto... 37 0.60 tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment... 28 0.98 tr|B0E2M1|B0E2M1_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.8 tr|A7TGD3|A7TGD3_VANPO Putative uncharacterized protein OS=Vande... 35 3.0 tr|A3B6L1|A3B6L1_ORYSJ Putative uncharacterized protein OS=Oryza... 34 3.9 tr|B5LIN4|B5LIN4_TETTH Rnf2p OS=Tetrahymena thermophila GN=RNF2 ... 34 3.9 tr|B8JA34|B8JA34_9DELT Beta-lactamase OS=Anaeromyxobacter dehalo... 33 6.6 tr|O82276|O82276_ARATH Putative non-LTR retroelement reverse tra... 33 8.6
>tr|Q4QQE8|Q4QQE8_SCHMA Endonuclease-reverse transcriptase OS=Schistosoma mansoni PE=2 SV=1 Length = 992
Score = 42.0 bits (97), Expect(2) = 1e-04 Identities = 26/85 (30%), Positives = 37/85 (43%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 E+ A R++K KAAG D P E K V + K + I+D Sbjct: 491 EISMAIRQIKSGKAAGPDNIPAEALKANV-------------AATAKILHILFSKIWDEE 537
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 +P +++ IPKKGDL+ DN Sbjct: 538 QVPKDWKKGLLIKIPKKGDLSKCDN 562
Score = 26.6 bits (57), Expect(2) = 1e-04 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = -1
Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13 GI L+S+ K+ ++L R Q GF + C Q+A L+ IV I Sbjct: 565 GITLLSIPGKVFNRVLLNRMKDSVDAQLRDQQAGFRKDRSCTDQIATLRIIVEQSI 620
>tr|A8PIF8|A8PIF8_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_13309 PE=4 SV=1 Length = 872
Score = 44.7 bits (104), Expect = 0.003 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 22/105 (20%) Frame = -2
Query: 437 LDWYEVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRK---------------- 306 L+W EV A RR+ R+ A G DG K LV ++ + V R+ Sbjct: 626 LEWREVLLAIRRMNRNTAPGKDGIHVNVLKSLVSEECMEEVKRQNPAFKRPEKVQINLPE 685
Query: 305 ------P*SKMGKAYLYMIEGIYDTGDIPAGASDAMIVSIPKKGD 189 P + MGKA+ ++ ++D+G +P ++ I ++ K GD Sbjct: 686 YELPITPMTPMGKAFFVLLNRVWDSGALPDTWNEVWICNLLKPGD 730
>tr|Q5DEY9|Q5DEY9_SCHJA SJCHGC02887 protein OS=Schistosoma japonicum PE=2 SV=1 Length = 187
Score = 36.6 bits (83), Expect(2) = 0.004 Identities = 23/85 (27%), Positives = 38/85 (44%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 E+ A R++K KAAG D P E K + + + + I++ Sbjct: 3 EIKIAIRQIKSGKAAGPDNIPAEALKSDI-------------DITARMLHVLFKRIWEEE 49
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 +PA + ++ IPKKGDL+ +N Sbjct: 50 QVPADWKEGYLIKIPKKGDLSKCEN 74
Score = 26.9 bits (58), Expect(2) = 0.004 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = -1
Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13 GI L+SV K+ ++L R Q GF + C Q+A L+ IV I Sbjct: 77 GITLLSVPGKVFNRVLLNRMKDSVDAQLRDQQAGFRKDRSCTDQIATLRIIVEQSI 132
>tr|Q5C3A7|Q5C3A7_SCHJA SJCHGC06937 protein (Fragment) OS=Schistosoma japonicum PE=2 SV=2 Length = 244
Score = 41.6 bits (96), Expect = 0.024 Identities = 31/90 (34%), Positives = 43/90 (47%) Frame = -2
Query: 440 PLDWYEVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEG 261 P YEV +A LKR +AAG D PE F KD G + ++ Sbjct: 81 PPSLYEVEKAIGNLKRGRAAGPDRLTPEVF----KDGG---------PVLAARLTEILSR 127
Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171 I++ G IP+ S ++IV I KKG ++ DN Sbjct: 128 IWELGVIPSDWSQSLIVPIYKKGQKSSCDN 157
>tr|Q5C3A3|Q5C3A3_SCHJA SJCHGC09318 protein (Fragment) OS=Schistosoma japonicum PE=2 SV=2 Length = 513
Score = 40.4 bits (93), Expect = 0.054 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 EV +A +LKR +AAG DG PE F KD G + ++ ++D Sbjct: 228 EVQKAISKLKRGRAAGSDGLTPEVF----KDGG---------PVLAIRLTSILAKVWDLD 274
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 IP+ S ++IV I KKG ++ DN Sbjct: 275 KIPSDWSKSLIVPIYKKGPKSSCDN 299
>tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4 SV=1 Length = 1329
Score = 38.9 bits (89), Expect = 0.16 Identities = 25/85 (29%), Positives = 39/85 (45%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 E+ +A + ++ +K G DG P EF+K K+ GL L +I G Sbjct: 488 ELQKALQSMECNKVPGIDGLPAEFYKTFWKEVGLD-------------LLQVINESLAYG 534
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 +P A++ +PKKGDL + N Sbjct: 535 QLPLSCRRAVLTLLPKKGDLNDIKN 559
>tr|Q30KX0|Q30KX0_SCHMA Reverse transcriptase SR3-left (Fragment) OS=Schistosoma mansoni PE=4 SV=1 Length = 271
Score = 29.6 bits (65), Expect(2) = 0.16 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = -1
Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13 GI+L+SV K+ ++L R Q GF + C GQ+A L+ IV + Sbjct: 34 GISLLSVPGKVFNRVLLNRMKDAVDAELRDQQAGFRKDRSCTGQIATLRIIVEQSV 89
Score = 28.1 bits (61), Expect(2) = 0.16 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -2
Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171 I++ +P + ++ IPKKGDL+ +N Sbjct: 2 IWEEEQVPMDWKEGYLIKIPKKGDLSKCEN 31
>tr|Q76IM4|Q76IM4_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2 PE=4 SV=1 Length = 1246
Score = 37.0 bits (84), Expect = 0.60 Identities = 28/85 (32%), Positives = 37/85 (43%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 E+ A L KA G DG P EF+K S +GK L + + TG Sbjct: 421 ELYVALMSLANGKAPGIDGIPVEFYKAFW-------------SVVGKDMLEVFLESWRTG 467
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 +P A+I +PKKGDL + N Sbjct: 468 LLPRSCRRAIITLLPKKGDLQDLKN 492
>tr|Q3KZB5|Q3KZB5_SCHJA SJCHGC09460 protein (Fragment) OS=Schistosoma japonicum PE=2 SV=1 Length = 134
Score = 37.0 bits (84), Expect = 0.60 Identities = 29/85 (34%), Positives = 39/85 (45%) Frame = -2
Query: 425 EVGEACRRLKRHKAAGGDGSPPEFFKLLVKDKGLRSVPRKP*SKMGKAYLYMIEGIYDTG 246 EV A LKR +AAG DG P+ F KD G R ++ I++ Sbjct: 34 EVANAIGNLKRGRAAGSDGLTPKIF----KDGGPAVAAR---------LTEILARIWELD 80
Query: 245 DIPAGASDAMIVSIPKKGDLTNTDN 171 IP+ S +IV I KKG ++ DN Sbjct: 81 VIPSDWSRTLIVPIFKKGQKSSCDN 105
>tr|Q30KW9|Q30KW9_SCHMA Reverse transcriptase SR3-right (Fragment) OS=Schistosoma mansoni PE=4 SV=1 Length = 271
Score = 28.1 bits (61), Expect(2) = 0.98 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -2
Query: 260 IYDTGDIPAGASDAMIVSIPKKGDLTNTDN 171 I++ +P + ++ IPKKGDL+ +N Sbjct: 2 IWEEEQVPMDWKEGYLIKIPKKGDLSKCEN 31
Score = 26.9 bits (58), Expect(2) = 0.98 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Frame = -1
Query: 162 GIALISVAIKILTKILEKRNF------FNPGQVGFCTNEECIGQVACLKEIVNSVI 13 GI+L+SV K+ ++L R Q GF + C Q+A L+ IV + Sbjct: 34 GISLLSVPGKVFNRVLLNRMKDTIDAELRDQQAGFRRDRSCTDQIATLRIIVEQSV 89
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