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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920760
Clone id YMU001_000141_B10
Library
Length 263
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000141_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCTTGAAAGCCAGCTTCGATGACACAGCGTTGTGCATTTGCAAAAGCTGATCCAAATCC
TCGGAATTGAGAGCCTGACTATAACCCATCTTTCCATCATCTTGCTCGCCGGGAGAGCCA
GAGCCCGCTACCATATCTTTGGAATCACCTTCTCTACTCTGTTGGGTGCTACTCATCTTA
ATTGCATCAACTTGCTTTTGCATCGATCTCTTCTGGGAATGATCTGCTTCCTTTGGCTGC
ATGTTGTATTCGAACGCTGGTTT
■■Homology search results ■■ -
sp_hit_id O74434
Definition sp|O74434|MU174_SCHPO Meiotically up-regulated gene 174 protein OS=Schizosaccharomyces pombe
Align length 61
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920760|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_B10.
         (263 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O74434|MU174_SCHPO Meiotically up-regulated gene 174 protein ...    32   1.3  
sp|P40631|MLH_TETTH Micronuclear linker histone polyprotein OS=T...    30   2.9  
sp|Q6DFQ2|CQ085_XENTR Uncharacterized protein C17orf85 homolog O...    30   2.9  
sp|O96838|FYV1_DROME Putative FYVE finger-containing phosphoinos...    30   5.0  
sp|Q9VK33|SMBT_DROME Polycomb protein Sfmbt OS=Drosophila melano...    29   6.5  
sp|Q3AUZ9|CH602_SYNS9 60 kDa chaperonin 2 OS=Synechococcus sp. (...    29   6.5  
sp|Q0I885|CH601_SYNS3 60 kDa chaperonin 1 OS=Synechococcus sp. (...    29   6.5  
sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27 O...    29   8.5  
sp|Q92253|RCO3_NEUCR Probable glucose transporter rco-3 OS=Neuro...    29   8.5  
sp|A5DVD6|PAN1_LODEL Actin cytoskeleton-regulatory complex prote...    29   8.5  

>sp|O74434|MU174_SCHPO Meiotically up-regulated gene 174 protein
           OS=Schizosaccharomyces pombe GN=mug174 PE=1 SV=2
          Length = 626

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = -1

Query: 245 NMQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALN 66
           N  P E+D S   S     D+  +SST  S  GD     A   S        +  S +LN
Sbjct: 259 NSTPSESDSSSSESSSSVSDSSDLSSTSDSSSGDESSDTARQSSSDTISSNNVSVSVSLN 318

Query: 65  S 63
           +
Sbjct: 319 T 319


>sp|P40631|MLH_TETTH Micronuclear linker histone polyprotein
           OS=Tetrahymena thermophila GN=MLH PE=1 SV=1
          Length = 633

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -1

Query: 239 QPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGK 90
           QPKE    +KR   +   A K S  +     DSK M A        +D K
Sbjct: 563 QPKEESSDRKRRESRSQSAKKTSDKKSKNRSDSKKMTAEDPKKNNAEDSK 612


>sp|Q6DFQ2|CQ085_XENTR Uncharacterized protein C17orf85 homolog
           OS=Xenopus tropicalis PE=2 SV=1
          Length = 611

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/68 (25%), Positives = 34/68 (50%)
 Frame = -1

Query: 260 PAFEYNMQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGY 81
           P  E   + K+ +HS  RS + ++D   +SS  ++ EG+ ++    + S  E +D     
Sbjct: 164 PTNEKGQRKKDGEHSSARSKKDRLDDSPLSSGDETEEGEVEE---DNPSEAEDEDETETE 220

Query: 80  SQALNSED 57
            +++N  D
Sbjct: 221 KKSVNPPD 228


>sp|O96838|FYV1_DROME Putative FYVE finger-containing phosphoinositide
            kinase fab1 OS=Drosophila melanogaster GN=fab1 PE=1 SV=2
          Length = 1809

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 23/83 (27%), Positives = 35/83 (42%)
 Frame = -1

Query: 260  PAFEYNMQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGY 81
            P   + +   E +  +K  ++K   A    S Q SR G  +        P    DG+ G 
Sbjct: 818  PFLTFPLPYLETEQGRKCKLRKLFPAELYFSKQWSRTGLER--------PDSMGDGEAGK 869

Query: 80   SQALNSEDLDQLLQMHNAVSSKL 12
            S+  N E+  QLL  H+ V  K+
Sbjct: 870  SEPGNKENQMQLLPAHDFVLMKI 892


>sp|Q9VK33|SMBT_DROME Polycomb protein Sfmbt OS=Drosophila
            melanogaster GN=Sfmbt PE=1 SV=2
          Length = 1220

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 257  AFEYNMQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGS 114
            AF  N QP+E    +        D      ++QS    S D++AGSGS
Sbjct: 1046 AFYENNQPEEEGDEEDPDADGDGDGSTSHISEQSTTQSSSDLIAGSGS 1093


>sp|Q3AUZ9|CH602_SYNS9 60 kDa chaperonin 2 OS=Synechococcus sp.
           (strain CC9902) GN=groL2 PE=3 SV=1
          Length = 562

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -1

Query: 212 KRSMQKQVDAIK--MSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDLDQLLQ 39
           +R M+K    +   ++S  Q+ EGDS   VA   S G+++ G+M  ++A++   +D ++ 
Sbjct: 116 RRGMEKAAAQVVAGLASRSQAVEGDSIQQVATVSSSGDEEVGRM-IAEAMDRVSVDGVIT 174

Query: 38  MHNAVS 21
           +  + S
Sbjct: 175 VEESKS 180


>sp|Q0I885|CH601_SYNS3 60 kDa chaperonin 1 OS=Synechococcus sp.
           (strain CC9311) GN=groL1 PE=3 SV=1
          Length = 553

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -1

Query: 212 KRSMQKQVDAIKMSSTQQSRE--GDSKDMVAGSGSPGEQDDGKMGYSQALNSEDLDQLLQ 39
           +R M+K V A+  S  Q+S+   GD+   VA   S G+++ G+M  ++A++    D ++ 
Sbjct: 116 RRGMEKAVAAVVASLNQRSQSVSGDAIRQVATVSSGGDEEVGRM-VAEAMDRVSFDGVIT 174

Query: 38  MHNAVS 21
           +  + S
Sbjct: 175 VEESKS 180


>sp|O74503|UAF30_SCHPO Upstream activation factor subunit spp27
           OS=Schizosaccharomyces pombe GN=spp27 PE=1 SV=1
          Length = 233

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = -1

Query: 218 SQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDLDQLLQ 39
           S+K S++KQ  A K    + +  G  +       +   ++DG+ G  +  N +  +  L 
Sbjct: 59  SEKESLEKQAPARKTKGKRATENGTEEGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLN 118

Query: 38  MHNAVSSKLA 9
               +S KLA
Sbjct: 119 KPMKLSPKLA 128


>sp|Q92253|RCO3_NEUCR Probable glucose transporter rco-3
           OS=Neurospora crassa GN=rco-3 PE=3 SV=2
          Length = 594

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 239 QPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKM 87
           Q ++  H Q++  Q QVD ++ S ++ S    S+    GS + G   D K+
Sbjct: 534 QQQQQQHHQQQQHQLQVD-LQQSQSRTSNSSTSQTDTGGSNNTGASQDDKL 583


>sp|A5DVD6|PAN1_LODEL Actin cytoskeleton-regulatory complex protein
           PAN1 OS=Lodderomyces elongisporus GN=PAN1 PE=3 SV=1
          Length = 1505

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 227 ADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDLDQ 48
           AD + K +M    +++K    +Q+R   SK M    GS  + DD   GY  +   +   +
Sbjct: 578 ADKTLKDTMDSLKNSLKNGGAKQTR---SKPMTKPDGSRFKNDDSDFGYVSSSRYKKKSE 634

Query: 47  LLQMHNAVSSK 15
             +  NA +SK
Sbjct: 635 EEKQANARTSK 645
tr_hit_id A6RVA7
Definition tr|A6RVA7|A6RVA7_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10)
Align length 91
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920760|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_B10.
         (263 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6RVA7|A6RVA7_BOTFB Putative uncharacterized protein OS=Botry...    35   2.4  
tr|B3DJN8|B3DJN8_DANRE Robo1 protein OS=Danio rerio GN=robo1 PE=...    34   3.2  
tr|Q17385|Q17385_CAEEL ELAV-type RNA binding protein variant A O...    34   3.2  
tr|A8DYS1|A8DYS1_CAEEL Elav-type rna binding protein family prot...    34   3.2  
tr|A8DYS0|A8DYS0_CAEEL Elav-type rna binding protein family prot...    34   3.2  
tr|A7KQE9|A7KQE9_CAEEL ELAV-type RNA binding protein variant E (...    34   3.2  
tr|A7KQE7|A7KQE7_CAEEL ELAV-type RNA binding protein variant C O...    34   3.2  
tr|A2QBY3|A2QBY3_ASPNC Contig An02c0010, complete genome OS=Aspe...    34   4.2  
tr|Q6JZX2|Q6JZX2_9APHY Ste3-like pheromone receptor (Fragment) O...    33   5.4  
tr|Q5BGF4|Q5BGF4_EMENI Putative uncharacterized protein OS=Emeri...    33   7.1  
tr|Q5B9R6|Q5B9R6_EMENI Putative uncharacterized protein OS=Emeri...    33   7.1  
tr|Q5AY30|Q5AY30_EMENI Putative uncharacterized protein OS=Emeri...    33   7.1  
tr|Q5AT04|Q5AT04_EMENI Putative uncharacterized protein OS=Emeri...    33   7.1  
tr|Q1WTS2|Q1WTS2_LACS1 Putative uncharacterized protein OS=Lacto...    33   9.2  
tr|Q4E5T5|Q4E5T5_TRYCR Mucin-associated surface protein (MASP), ...    33   9.2  
tr|Q4E472|Q4E472_TRYCR Mucin-associated surface protein (MASP), ...    33   9.2  

>tr|A6RVA7|A6RVA7_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_04387
           PE=4 SV=1
          Length = 632

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 18/91 (19%)
 Frame = -1

Query: 245 NMQPKEA------DHSQKRSMQKQVDAI------------KMSSTQQSREGDSKDMVAGS 120
           +MQP++A      D   KR++   ++ +            K+    +SRE  SK +V  +
Sbjct: 159 SMQPRDARVDDGFDEDLKRALAMSLEEVNGHSGAGYVPQSKLQPVPESREPPSKGVVTDA 218

Query: 119 GSPGEQDDGKMGYSQALNSEDLDQLLQMHNA 27
           G  GE++D  +  + A +  D+++  + H A
Sbjct: 219 GKSGEEEDDDLKAAIAASLADMEEQKKKHTA 249


>tr|B3DJN8|B3DJN8_DANRE Robo1 protein OS=Danio rerio GN=robo1 PE=2
            SV=1
          Length = 1649

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = -1

Query: 242  MQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNS 63
            M P +    Q+R++ + ++    SST       +  M+ G GS  E+D+   G S A++S
Sbjct: 1327 MHPHQQHLPQQRALLRGLEQTPASSTCDLESSVTGSMINGWGSASEEDNASSGRSSAVSS 1386

Query: 62   ED 57
             D
Sbjct: 1387 SD 1388


>tr|Q17385|Q17385_CAEEL ELAV-type RNA binding protein variant A
           OS=Caenorhabditis elegans GN=etr-1 PE=2 SV=1
          Length = 584

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -1

Query: 233 KEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDL 54
           KE  HSQ          +K + TQ+ ++  +K M+ GSG+ G    G     Q LN   L
Sbjct: 200 KEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGA-GSPKGGAASLLQNLNPALL 258

Query: 53  DQL--LQMHNAVSSKLA 9
            QL   Q + AV+S L+
Sbjct: 259 QQLGGGQNYQAVASLLS 275


>tr|A8DYS1|A8DYS1_CAEEL Elav-type rna binding protein family protein
           1, isoform e OS=Caenorhabditis elegans GN=etr-1 PE=4
           SV=1
          Length = 586

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -1

Query: 233 KEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDL 54
           KE  HSQ          +K + TQ+ ++  +K M+ GSG+ G    G     Q LN   L
Sbjct: 200 KEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGA-GSPKGGAASLLQNLNPALL 258

Query: 53  DQL--LQMHNAVSSKLA 9
            QL   Q + AV+S L+
Sbjct: 259 QQLGGGQNYQAVASLLS 275


>tr|A8DYS0|A8DYS0_CAEEL Elav-type rna binding protein family protein
           1, isoform f OS=Caenorhabditis elegans GN=etr-1 PE=4
           SV=1
          Length = 588

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -1

Query: 233 KEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDL 54
           KE  HSQ          +K + TQ+ ++  +K M+ GSG+ G    G     Q LN   L
Sbjct: 200 KEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGA-GSPKGGAASLLQNLNPALL 258

Query: 53  DQL--LQMHNAVSSKLA 9
            QL   Q + AV+S L+
Sbjct: 259 QQLGGGQNYQAVASLLS 275


>tr|A7KQE9|A7KQE9_CAEEL ELAV-type RNA binding protein variant E
           (Elav-type rna binding protein family protein 1, isoform
           g) OS=Caenorhabditis elegans GN=etr-1 PE=2 SV=1
          Length = 513

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -1

Query: 233 KEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDL 54
           KE  HSQ          +K + TQ+ ++  +K M+ GSG+ G    G     Q LN   L
Sbjct: 200 KEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGA-GSPKGGAASLLQNLNPALL 258

Query: 53  DQL--LQMHNAVSSKLA 9
            QL   Q + AV+S L+
Sbjct: 259 QQLGGGQNYQAVASLLS 275


>tr|A7KQE7|A7KQE7_CAEEL ELAV-type RNA binding protein variant C
           OS=Caenorhabditis elegans GN=etr-1 PE=2 SV=1
          Length = 378

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -1

Query: 233 KEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDL 54
           KE  HSQ          +K + TQ+ ++  +K M+ GSG+ G    G     Q LN   L
Sbjct: 200 KEMHHSQTMEGCSAPLVVKFADTQKDKDVKTKSMITGSGA-GSPKGGAASLLQNLNPALL 258

Query: 53  DQL--LQMHNAVSSKLA 9
            QL   Q + AV+S L+
Sbjct: 259 QQLGGGQNYQAVASLLS 275


>tr|A2QBY3|A2QBY3_ASPNC Contig An02c0010, complete genome
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An02g01620 PE=4 SV=1
          Length = 737

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 242 MQPKEADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNS 63
           MQ ++  H Q +++Q+Q     M   QQ          A +G PG+Q   +   +Q  N 
Sbjct: 171 MQLQQMPHGQPQNLQQQQQFFAMQQAQQQAHQAQVQQAAAAGQPGQQTPQQRAAAQPQNV 230

Query: 62  ED 57
            D
Sbjct: 231 HD 232


>tr|Q6JZX2|Q6JZX2_9APHY Ste3-like pheromone receptor (Fragment)
           OS=Trichaptum biforme GN=ste3 PE=4 SV=1
          Length = 171

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 124 PATIS--LESPSLLCWVLLILIASTCFCI---DLFWE*SASFGCMLYSN 255
           PAT++  L  P +LCW ++I + S  +CI     FW+  A F  ML SN
Sbjct: 116 PATVNVWLTYPLVLCWPVVIGMISATYCILTLLAFWKRKAQFSEMLASN 164


>tr|Q5BGF4|Q5BGF4_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN0376.2 PE=4 SV=1
          Length = 1376

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 230 EADHSQKRSMQKQVDAIKMSSTQQSREGDSKDMVAGSGSPGEQDDGKMGYSQALNSEDLD 51
           EA H+Q  ++QK+V A++M  T+  R+         S +P E+   ++   + L   D D
Sbjct: 344 EATHAQIAALQKEVAALRMKGTRTPRK--------ASQAPAEEKQKRLSEGKCLRCGDPD 395

Query: 50  QLLQM 36
             +Q+
Sbjct: 396 HFVQL 400