BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920761|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_B11.
         (463 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01037|RIR1_SHV21 Ribonucleoside-diphosphate reductase large ...    31   2.3  
sp|Q00566|MECP2_RAT Methyl-CpG-binding protein 2 OS=Rattus norve...    31   3.0  
sp|P37630|YHIM_ECOLI Inner membrane protein yhiM OS=Escherichia ...    30   3.9  
sp|P15540|CP21A_PIG Cytochrome P450 21 OS=Sus scrofa GN=CYP21 PE...    30   5.1  
sp|Q88LF9|UVRB_PSEPK UvrABC system protein B OS=Pseudomonas puti...    29   8.7  

>sp|Q01037|RIR1_SHV21 Ribonucleoside-diphosphate reductase large
           chain OS=Saimiriine herpesvirus 2 (strain 11) GN=61 PE=3
           SV=1
          Length = 767

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -2

Query: 462 RNFFFNINEVKLKTTKNKSIK*QGVNHHHHYQCRG----CPGLCKKVLSWPRQ 316
           ++  F++    +KT     I  + +N HH Y+ +G    C  LC +++  P+Q
Sbjct: 351 KSLMFSLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCAEIVQQPKQ 403


>sp|Q00566|MECP2_RAT Methyl-CpG-binding protein 2 OS=Rattus
           norvegicus GN=Mecp2 PE=1 SV=1
          Length = 492

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = -1

Query: 409 KHKITRCKSSSSLSMPRMPGVVQKSIVMAASELCERATTVGSRTRKGKGDGEMKCYINSL 230
           + K+ R  S  S   P+ P   Q  +  AA+      TTV  +  K +G+GE K  ++S 
Sbjct: 413 EEKMPRAGSLESDGCPKEPAKTQPMVAAAATTTTTTTTTVAEKY-KHRGEGERKDIVSSS 471

Query: 229 QKAKTPYEP 203
                  EP
Sbjct: 472 MPRPNREEP 480


>sp|P37630|YHIM_ECOLI Inner membrane protein yhiM OS=Escherichia
           coli (strain K12) GN=yhiM PE=1 SV=1
          Length = 364

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 197 LCGFIWSFSLL*TVDITFHFSISLPLPSATTYC 295
           L GFIWS +LL + DIT H+     L   T  C
Sbjct: 182 LLGFIWSITLLRSADITPHYVAGHVLLGLTAIC 214


>sp|P15540|CP21A_PIG Cytochrome P450 21 OS=Sus scrofa GN=CYP21 PE=1
           SV=2
          Length = 492

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 190 IVSMWVHMEF*PFVNC*YNISFLHLPSPS*CDYLLWWPFHKALTR 324
           +V  WV     P +   Y ++  H P  S  DY L+W  HK LTR
Sbjct: 82  LVRKWVDFAGRPQIPS-YKLASQHCPDISLGDYSLFWKAHKKLTR 125


>sp|Q88LF9|UVRB_PSEPK UvrABC system protein B OS=Pseudomonas putida
           (strain KT2440) GN=uvrB PE=3 SV=1
          Length = 671

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -1

Query: 397 TRCKSSSSLSMPRMPGVVQKSIVMAASELCERATTVGSRTRKGKG 263
           T  +    ++     G+V K +V   +++ E AT  G+R++K KG
Sbjct: 566 TERRREKQIAFNEANGIVPKGVVKDITDIMEGATVPGARSKKRKG 610

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920761|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_B11.
         (463 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******