BP920775 [AcEST]

BP920775
Clone id	YMU001_000141_D06
Library	YMU01
Length	589
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000141_D06.
Accession	BP920775
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CAGTCTTTGTTACTACATTCTAGTGACCCTATCACATATAGAGTTAACTGATAGGTGTAG ATTGTCAATAGAGACAATAATTAAACGCTTAAGCACTACCTTTATTTATAAAAGTATAGT GATAAGTAAAGAAAACTATACGTCGTCGTCATCTGTCTCTAGCAGTTTTCACTATCATAT AGGTGTATGAAACGAAAGTGCTAGCAAGTATACCGCTGTTTCAATTCTAATTACGCTATT TGTTCCTTGAATTCGAAAGTCATCAAGTAAGCTAGCTTTCAGGTTGACGATAAAAAGGAT TAAAAAAAGGTTTAACACGCACAGTTTAAGTTTACCTTAAGTTTGCGTCAGGGTGCAAGC AAGCAAGCAAGAATTGGCTGTTTACCATACCATTATGAGGGTAGGGCATTTTTAATAAAT CATCCCTATCCCCGTTGTTTGCCCCCGTTCATTGAAGTTAGCAAAGTCATGCAAATAGAT GGCAGACTGGATACCTTACACTCCAAGGCGGCTTTTCGTTAAGGTTGTTACGTTTTAATT CTTTGAAACGAGCTTAGTTTCTTGCTAGCACAGTGCTGTTATAACTGTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920775\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_D06. (589 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q5M9Q8
Definition	tr\|Q5M9Q8\|Q5M9Q8_TOBAC Putative uncharacterized protein orf173 OS=Nicotiana tabacum
Align length	74
Score (bit)	37.7
E-value	0.49
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP920775\|Adiantum capillus-veneris mRNA, clone: YMU001_000141_D06. (589 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q5M9Q8\|Q5M9Q8_TOBAC Putative uncharacterized protein orf173 O... 38 0.49 >tr\|Q5M9Q8\|Q5M9Q8_TOBAC Putative uncharacterized protein orf173 OS=Nicotiana tabacum GN=orf173 PE=4 SV=1 Length = 173 Score = 37.7 bits (86), Expect = 0.49 Identities = 26/74 (35%), Positives = 41/74 (55%) Frame = +2 Query: 74 TIIKRLSTTFIYKSIVISKENYTXXXXXXXXFHYHIGVNESASKYTAVSILITLFVPI 253 T+I RL+ F +IVI++E F YH+ V N+SAS+YTAV ++ +F Sbjct: 18 TLIPRLTQLFDCTAIVIARER------RDGAFLYHLAVENKSASRYTAVRLIQGVF---- 67 Query: 254 RKSSSKLAFRLTIK 295 +++A LT+K Sbjct: 68 ----TEVAGNLTVK 77