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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920783
Clone id YMU001_000141_E07
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000141_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCATAGAATCCTTGGAGTACTCGATCTTTGCTCTTCTATAAGTAGCAGCCTCAACTGCA
ACTGCAGATACAACATGGTTAGAAGCCATATCCTCTACTAAATATTGCATTCCTCCCTTT
CCAAAGTTAATTCTTAAGGGTAGACCTGTCTCCCTTGACTTGATCTTACTATCCTTAAAG
AACACAACACCTTTTCTTAAAGGCATCATTAAAACTGTCACAATCCCTCTTACATGATCT
GTGCTATCACACCATATACATCTGTGACCAAACCCTTCTTAGGTTTGTTGTCTTTGCCTT
GAAGGCGGTGCTGATGGATGTCCCTTTTCGTCAAGCTTTGCAAGTATCAGCTTGAATTCA
CAGATGCCTTTCACAATCTCATCT
■■Homology search results ■■ -
sp_hit_id Q8Z0Q9
Definition sp|Q8Z0Q9|GLGA2_ANASP Probable glycogen synthase 2 OS=Anabaena sp. (strain PCC 7120)
Align length 59
Score (bit) 30.4
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920783|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_E07.
         (384 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8Z0Q9|GLGA2_ANASP Probable glycogen synthase 2 OS=Anabaena s...    30   2.8  
sp|Q8UEH1|GLMS_AGRT5 Glucosamine--fructose-6-phosphate aminotran...    30   3.7  
sp|Q1E8Z0|ATG22_COCIM Autophagy-related protein 22 OS=Coccidioid...    29   8.4  

>sp|Q8Z0Q9|GLGA2_ANASP Probable glycogen synthase 2 OS=Anabaena sp.
           (strain PCC 7120) GN=glgA2 PE=3 SV=1
          Length = 492

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -2

Query: 233 VRGIVTVLMMPLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQY--LVEDMASNHVVSA 63
           + G+ T+    L +   +F+D K+  R+   P  +N+ KGG+ Y   V  ++ NH + A
Sbjct: 173 IGGVKTLWATGLNREAYYFQDDKL--RDDHNPFALNYMKGGIVYSNAVTTVSPNHALEA 229


>sp|Q8UEH1|GLMS_AGRT5 Glucosamine--fructose-6-phosphate
           aminotransferase [isomerizing] OS=Agrobacterium
           tumefaciens (strain C58 / ATCC 33970) GN=glmS PE=3 SV=3
          Length = 608

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -2

Query: 284 T*EGFGHRCIWCDSTDHVRGIVTVLMMPLRKGVVFFKD--SKIKSRETGLPLRINFGKGG 111
           T EG GHR       +HV G   +        VV F+D    + S  +G PL + +G+G 
Sbjct: 135 TREGLGHREAMLKMLNHVTGAYAL--------VVMFQDDPGTLLSARSGPPLAVGYGRGE 186

Query: 110 M 108
           M
Sbjct: 187 M 187


>sp|Q1E8Z0|ATG22_COCIM Autophagy-related protein 22 OS=Coccidioides
           immitis GN=ATG22 PE=3 SV=2
          Length = 661

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +1

Query: 148 VSLDLILLSLKNTTPFLKGIIKTVTIPLT*SVLSHHIHL*PNPS*VCCLCL 300
           + +++  L L N    + G++   +     S +SHH +L P+ + V C+CL
Sbjct: 455 LGMNIAALGLINVIAMISGVLGAFSW----SYISHHFNLRPSRTIVACICL 501
tr_hit_id A9TW93
Definition tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 115
Score (bit) 98.6
E-value 1.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920783|Adiantum capillus-veneris mRNA, clone:
YMU001_000141_E07.
         (384 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella paten...    99   1e-19
tr|A9SRG5|A9SRG5_PHYPA Predicted protein OS=Physcomitrella paten...    97   3e-19
tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella paten...    82   1e-14
tr|A9U319|A9U319_PHYPA Predicted protein OS=Physcomitrella paten...    81   2e-14
tr|A9TEU0|A9TEU0_PHYPA Predicted protein OS=Physcomitrella paten...    77   4e-13
tr|A9T8Z8|A9T8Z8_PHYPA Predicted protein OS=Physcomitrella paten...    77   6e-13
tr|A9T403|A9T403_PHYPA Predicted protein OS=Physcomitrella paten...    77   6e-13
tr|A9TU52|A9TU52_PHYPA Predicted protein OS=Physcomitrella paten...    76   1e-12
tr|A9U4X4|A9U4X4_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-12
tr|A9TGX4|A9TGX4_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-12
tr|A9T0Q6|A9T0Q6_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-12
tr|A9S1U2|A9S1U2_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-12
tr|A9U665|A9U665_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9U620|A9U620_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9U563|A9U563_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9TCC0|A9TCC0_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9T0C7|A9T0C7_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9S5Q1|A9S5Q1_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9U5R2|A9U5R2_PHYPA Predicted protein (Fragment) OS=Physcomit...    74   3e-12
tr|A9TWE9|A9TWE9_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|A9T3X3|A9T3X3_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|A9S502|A9S502_PHYPA Predicted protein OS=Physcomitrella paten...    74   3e-12
tr|A9U5B5|A9U5B5_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|A9U4X2|A9U4X2_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|A9U1D2|A9U1D2_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|A9TNW8|A9TNW8_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12

>tr|A9TW93|A9TW93_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_98120 PE=4 SV=1
          Length = 560

 Score = 98.6 bits (244), Expect = 1e-19
 Identities = 52/115 (45%), Positives = 70/115 (60%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DEI++G+ + ++  AKL+EKG  S   ++QR +  EG  HRC+WCDS DH R      + 
Sbjct: 264 DEIIRGMRDLQIKFAKLEEKGQSSRISTKQRPRPMEGVVHRCMWCDSIDHSRKECEEFIE 323

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            LRK VVFFKD  I S+E G  L  NFGKGGM+  + D      +S  + EA+TY
Sbjct: 324 KLRKRVVFFKDGMIHSKENGEKLETNFGKGGMKLFIGDTFKVQTIS--SNEASTY 376


>tr|A9SRG5|A9SRG5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_82862 PE=4 SV=1
          Length = 506

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 51/115 (44%), Positives = 70/115 (60%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           +EI++G+ + ++  AKL+EKG  S   ++QR +  EG  HRC+WCDS DH R      + 
Sbjct: 178 NEIIRGMRDLQIKFAKLEEKGQSSRTSTKQRPRPMEGVVHRCMWCDSIDHSRRECEEFIE 237

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            LRKGVVFFKD  I S+E G  L  NFGK GM+  + D      +S  + EA+TY
Sbjct: 238 ALRKGVVFFKDGMIHSKENGEKLETNFGKRGMKLFIGDTFKVQTIS--SNEASTY 290


>tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_94371 PE=4 SV=1
          Length = 250

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 50/115 (43%), Positives = 68/115 (59%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DEI+ G+ + ++  AKL+ KG  S   ++QR++  EG  HRC+WCDS DH R        
Sbjct: 90  DEIIHGMRDLQIKFAKLEGKGQSSRISTKQRRRPMEGVLHRCMWCDSIDHSRRKCEEFTE 149

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            LRKGVVFF+D  I S+E G  L  NFGK GM+  + D      +S  + EA+TY
Sbjct: 150 ALRKGVVFFRDGIIHSKENGEKLETNFGKRGMKLFIGDTFKVQTIS--SNEASTY 202


>tr|A9TCS9|A9TCS9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_91078 PE=4 SV=1
          Length = 373

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 50/115 (43%), Positives = 70/115 (60%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DEI++G+ + ++  AKL+EKG  S    +QR +   G  HRC+WCD+ DH+R        
Sbjct: 182 DEIIRGMRDLQIKFAKLEEKGQSSRISIKQRPRPMAGVVHRCMWCDNIDHLRRECEECTE 241

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            LRKGVVFFKD  I S+E G  L  NFGKGGM+  +  + +  V +  + EA+TY
Sbjct: 242 ILRKGVVFFKDGLIHSKENGEKLETNFGKGGMKLFI--VYTFKVQTISSNEASTY 294


>tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90813 PE=4 SV=1
          Length = 423

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 48/115 (41%), Positives = 68/115 (59%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DEI++G+ + ++  AKL+EKG      ++Q+ +  EG  HRC+WCD+ DH R        
Sbjct: 178 DEIIRGMRDLQIKFAKLEEKGQSPRISTKQKPRLMEGVVHRCMWCDNIDHSRRECEEFTE 237

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            L KGVVFFKD  + S+E G  L  NFGKGGM+  + D      +S  + EA+TY
Sbjct: 238 ALCKGVVFFKDGMMHSKENGEKLETNFGKGGMKLFIGDTFKVQTIS--SNEASTY 290


>tr|A9STR6|A9STR6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_83884 PE=4 SV=1
          Length = 296

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 50/115 (43%), Positives = 66/115 (57%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DEI+ G+ + ++  AKL+EK   S   ++QR    EG  HRC+WCDS DH +        
Sbjct: 105 DEIIHGMRDLQIKFAKLEEKDQSSRISTKQRPGPIEGVIHRCMWCDSIDHSKKECKDFTE 164

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
            LRKGV FFKD  I S+E+G  L  NF KGGM+  + D    H +S    EA+TY
Sbjct: 165 ALRKGVFFFKDGMIHSKESGEKLETNFSKGGMKLFIGDTFKVHTIS--RNEASTY 217


>tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64503 PE=4 SV=1
          Length = 643

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 50/125 (40%), Positives = 74/125 (59%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DE+VKG+ +F++ LAKL+EK     P S+   +   G+  RCIWCDS +H R      + 
Sbjct: 148 DELVKGMKDFQIKLAKLEEKER--LPESKSVSKP--GYIQRCIWCDSMEHPRRECGDFID 203

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATYRRAKI 24
            LR+GV+ +KD KI  R+TG  L+ NFGKGGM+ ++E+  S    +  + +A TY    I
Sbjct: 204 ILRQGVILWKDGKIALRDTGEFLKTNFGKGGMKKVLEEHLSQQ--ARASRKAITYGIEAI 261

Query: 23  EYSKD 9
              +D
Sbjct: 262 REKED 266


>tr|A9U319|A9U319_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_101132 PE=4 SV=1
          Length = 278

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 45/107 (42%), Positives = 67/107 (62%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           DE+VKGI + ++ LAKL+EK     P S+   +   G+  RCIWCD+ +H R      + 
Sbjct: 119 DELVKGIKDLQIKLAKLEEKER--LPESKSLSKP--GYIKRCIWCDNMEHPRRECGNFID 174

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSA 63
            LR+GV+ +KD KI  R+TG  L+ NFGKGGM+ L+E+  S   +++
Sbjct: 175 ILRQGVIIWKDGKIALRDTGKFLKTNFGKGGMKKLLEEHLSQQAMAS 221


>tr|A9TEU0|A9TEU0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_91833 PE=4 SV=1
          Length = 2095

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 42/115 (36%), Positives = 67/115 (58%)
 Frame = -2

Query: 383  DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
            DEI++G+ + ++ LA+L+E    +   +  +Q    G+  RCIWCD   H R        
Sbjct: 976  DEIIRGMRDLQIKLARLEENTSINDSKNVSKQ----GYVQRCIWCDDASHTRKDCNEFNN 1031

Query: 203  PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
             +R+G++ +KD KI  ++    L+INFGKGGM+ LV+D    H +S  A E+A+Y
Sbjct: 1032 MIRQGIICWKDGKIALKDREDLLQINFGKGGMRALVQDYLKKHEIS--ARESASY 1084



 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 39/115 (33%), Positives = 65/115 (56%)
 Frame = -2

Query: 383  DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
            +EI++G+ + ++ LA+L+E    +   +  +  + +G+  RCIWCD   H R        
Sbjct: 1913 EEIIRGMRDLQIKLARLEE----NTSINNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNN 1968

Query: 203  PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
             +R+G++ +KD KI  ++    L+INFGKGGM  LV+D    H     A E+A+Y
Sbjct: 1969 MIRQGIICWKDGKIALKDREDLLQINFGKGGMSVLVQDYLKEH--ETAARESASY 2021



 Score = 42.0 bits (97), Expect = 0.015
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = -2

Query: 191 GVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAATY 39
           G++ +KD KI  ++    L+INFGKGGM  LV+D    H     A E+A+Y
Sbjct: 408 GIICWKDGKIALKDREDLLQINFGKGGMSALVQDYLKEH--ETAARESASY 456


>tr|A9T8Z8|A9T8Z8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89653 PE=4 SV=1
          Length = 504

 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 41/113 (36%), Positives = 67/113 (59%)
 Frame = -2

Query: 383 DEIVKGICEFKLILAKLDEKGHPSAPPSRQRQQT*EGFGHRCIWCDSTDHVRGIVTVLMM 204
           +E++KGI + K+ + +L +    S+  + +  +   GF  RC+WCD+ +H RG       
Sbjct: 184 EELIKGIQDLKVEMTELKKSQMASSSKTIEGSK---GFIERCMWCDNPNHKRGECDSYKA 240

Query: 203 PLRKGVVFFKDSKIKSRETGLPLRINFGKGGMQYLVEDMASNHVVSAVAVEAA 45
            ++ G+V+FKD KI+   +  PL+ NFGKGGM+ LVE+  S +  SA+  E A
Sbjct: 241 AIKDGIVYFKDGKIRLIGSDEPLKTNFGKGGMKKLVEEQTSKN--SAIKEEGA 291